BLASTX nr result

ID: Coptis21_contig00023515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023515
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37888.1| unknown [Medicago truncatula]                          153   5e-35
sp|O24340.1|FPF1_SINAL RecName: Full=Flowering-promoting factor ...   151   2e-34
ref|NP_001237780.1| uncharacterized protein LOC100527299 [Glycin...   151   2e-34
ref|XP_003544636.1| PREDICTED: uncharacterized protein LOC100789...   150   3e-34
ref|XP_002872131.1| hypothetical protein ARALYDRAFT_910533 [Arab...   150   5e-34

>gb|AFK37888.1| unknown [Medicago truncatula]
          Length = 109

 Score =  153 bits (387), Expect = 5e-35
 Identities = 79/107 (73%), Positives = 85/107 (79%), Gaps = 7/107 (6%)
 Frame = +3

Query: 87  MSGVWVFKNGVIRLVENPPAGSE------KVLVYEPTGEVISSYATLERILTGLGWERYY 248
           MSGVWVFKNGV RLVENP A SE      K+LV+ PTGEV++SY  LERIL GLGWERYY
Sbjct: 1   MSGVWVFKNGVFRLVENPQAESEVRHGKRKMLVHLPTGEVVTSYVFLERILIGLGWERYY 60

Query: 249 D-DYDLLQFHKSSSIDLISLPKDFSKFKSVHMYDIVVKIPNQFRVRD 386
           D D DL QFHK  SIDLISLPKDFSKF S+HMYDIV+K PN F VRD
Sbjct: 61  DGDVDLYQFHKHCSIDLISLPKDFSKFNSIHMYDIVIKNPNVFHVRD 107


>sp|O24340.1|FPF1_SINAL RecName: Full=Flowering-promoting factor 1; Short=SaFPF1
           gi|2370459|emb|CAA72716.1| FPF1 protein [Sinapis alba]
          Length = 110

 Score =  151 bits (382), Expect = 2e-34
 Identities = 80/110 (72%), Positives = 86/110 (78%), Gaps = 8/110 (7%)
 Frame = +3

Query: 87  MSGVWVFKNGVIRLVENPPAGS------EKVLVYEPTGEVISSYATLERILTGLGWERYY 248
           MSGVWVFKNGVIRLVENP           KV+VY PTGEVISSY+TLE+IL  LGWERY+
Sbjct: 1   MSGVWVFKNGVIRLVENPNQSGGDTNSRRKVMVYLPTGEVISSYSTLEQILRSLGWERYF 60

Query: 249 D--DYDLLQFHKSSSIDLISLPKDFSKFKSVHMYDIVVKIPNQFRVRDMN 392
              D DLLQFHK SSIDLISLPKDF+KF SV+MYDIVVK PN F VRD N
Sbjct: 61  GGGDTDLLQFHKRSSIDLISLPKDFTKFSSVYMYDIVVKNPNYFHVRDSN 110


>ref|NP_001237780.1| uncharacterized protein LOC100527299 [Glycine max]
           gi|255632035|gb|ACU16370.1| unknown [Glycine max]
           gi|255634258|gb|ACU17493.1| unknown [Glycine max]
          Length = 114

 Score =  151 bits (382), Expect = 2e-34
 Identities = 80/113 (70%), Positives = 86/113 (76%), Gaps = 13/113 (11%)
 Frame = +3

Query: 87  MSGVWVFKNGVIRLVENPPA------------GSEKVLVYEPTGEVISSYATLERILTGL 230
           MSGVWVFKNGV RLVENP A               KVLV+ PTGEV+SSYA LE+ILTGL
Sbjct: 1   MSGVWVFKNGVFRLVENPQAEASDGRHGKGSSSKRKVLVHLPTGEVVSSYAFLEQILTGL 60

Query: 231 GWERYYD-DYDLLQFHKSSSIDLISLPKDFSKFKSVHMYDIVVKIPNQFRVRD 386
           GWERYYD D DL QFHK SSIDLISLPKDFSKF S++MYDIV+K PN F VRD
Sbjct: 61  GWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRD 113


>ref|XP_003544636.1| PREDICTED: uncharacterized protein LOC100789226 [Glycine max]
          Length = 113

 Score =  150 bits (380), Expect = 3e-34
 Identities = 79/112 (70%), Positives = 86/112 (76%), Gaps = 12/112 (10%)
 Frame = +3

Query: 87  MSGVWVFKNGVIRLVENPPA-----------GSEKVLVYEPTGEVISSYATLERILTGLG 233
           MSGVWVFKNGV RLVENP A              K+LV+ PTGEV+SSYA LE+ILTGLG
Sbjct: 1   MSGVWVFKNGVFRLVENPQAEVSDRHGKGSSSKRKMLVHLPTGEVVSSYAFLEQILTGLG 60

Query: 234 WERYYD-DYDLLQFHKSSSIDLISLPKDFSKFKSVHMYDIVVKIPNQFRVRD 386
           WERYYD D DL QFHK SSIDLISLPKDFSKF S++MYDIV+K PN F VRD
Sbjct: 61  WERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRD 112


>ref|XP_002872131.1| hypothetical protein ARALYDRAFT_910533 [Arabidopsis lyrata subsp.
           lyrata] gi|297317968|gb|EFH48390.1| hypothetical protein
           ARALYDRAFT_910533 [Arabidopsis lyrata subsp. lyrata]
          Length = 109

 Score =  150 bits (378), Expect = 5e-34
 Identities = 79/107 (73%), Positives = 89/107 (83%), Gaps = 7/107 (6%)
 Frame = +3

Query: 87  MSGVWVFKNGVIRLVENP-PAGSE-----KVLVYEPTGEVISSYATLERILTGLGWERYY 248
           MSGVWVFKNGVIRLVENP  +GS+     KV+VY PTGEV+SSY+TLE+IL  LGWERY+
Sbjct: 1   MSGVWVFKNGVIRLVENPNQSGSDTHSRRKVMVYLPTGEVVSSYSTLEQILQSLGWERYF 60

Query: 249 D-DYDLLQFHKSSSIDLISLPKDFSKFKSVHMYDIVVKIPNQFRVRD 386
             D DLLQFHK SSIDLISLP+DF+KF SV+MYDIVVK PN F VRD
Sbjct: 61  GGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 107


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