BLASTX nr result

ID: Coptis21_contig00023490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023490
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001044218.1| Os01g0743400 [Oryza sativa Japonica Group] g...   156   1e-36
dbj|BAD87908.1| putative tryptophanyl-tRNA synthetase [Oryza sat...   156   1e-36
ref|XP_002516528.1| tryptophanyl-tRNA synthetase, putative [Rici...   155   2e-36
ref|XP_002304617.1| predicted protein [Populus trichocarpa] gi|2...   154   5e-36
ref|XP_003569783.1| PREDICTED: tryptophanyl-tRNA synthetase-like...   154   9e-36

>ref|NP_001044218.1| Os01g0743400 [Oryza sativa Japonica Group]
           gi|57899973|dbj|BAD87909.1| putative tryptophanyl-tRNA
           synthetase [Oryza sativa Japonica Group]
           gi|113533749|dbj|BAF06132.1| Os01g0743400 [Oryza sativa
           Japonica Group]
          Length = 393

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/84 (89%), Positives = 80/84 (95%)
 Frame = -2

Query: 253 VPEPLIPPTGARVMSLTDGMSKMSKSAPSELSRINLLDPKDVIVNKIKRCKTDSFSGLEF 74
           VPE LIPP GARVMSLTDG+SKMSKSAPS+ SRINLLDPKDVI+NKIKRCKTDSF GLEF
Sbjct: 236 VPEALIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIMNKIKRCKTDSFPGLEF 295

Query: 73  DNPERPECNNLLSVYQIITGRTKE 2
           DNPERPECNNLLS+YQIITG+TKE
Sbjct: 296 DNPERPECNNLLSIYQIITGKTKE 319


>dbj|BAD87908.1| putative tryptophanyl-tRNA synthetase [Oryza sativa Japonica Group]
           gi|125527667|gb|EAY75781.1| hypothetical protein
           OsI_03697 [Oryza sativa Indica Group]
           gi|125571983|gb|EAZ13498.1| hypothetical protein
           OsJ_03415 [Oryza sativa Japonica Group]
          Length = 399

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/84 (89%), Positives = 80/84 (95%)
 Frame = -2

Query: 253 VPEPLIPPTGARVMSLTDGMSKMSKSAPSELSRINLLDPKDVIVNKIKRCKTDSFSGLEF 74
           VPE LIPP GARVMSLTDG+SKMSKSAPS+ SRINLLDPKDVI+NKIKRCKTDSF GLEF
Sbjct: 242 VPEALIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIMNKIKRCKTDSFPGLEF 301

Query: 73  DNPERPECNNLLSVYQIITGRTKE 2
           DNPERPECNNLLS+YQIITG+TKE
Sbjct: 302 DNPERPECNNLLSIYQIITGKTKE 325


>ref|XP_002516528.1| tryptophanyl-tRNA synthetase, putative [Ricinus communis]
           gi|223544348|gb|EEF45869.1| tryptophanyl-tRNA
           synthetase, putative [Ricinus communis]
          Length = 412

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/84 (86%), Positives = 80/84 (95%)
 Frame = -2

Query: 253 VPEPLIPPTGARVMSLTDGMSKMSKSAPSELSRINLLDPKDVIVNKIKRCKTDSFSGLEF 74
           VPEPLIPP GARVMSLTDG++KMSKSAPS+ SRINLLDPKDVI NKIKRCKTDSF GLEF
Sbjct: 255 VPEPLIPPAGARVMSLTDGLAKMSKSAPSDQSRINLLDPKDVIANKIKRCKTDSFPGLEF 314

Query: 73  DNPERPECNNLLSVYQIITGRTKE 2
           DNPERPECNNLLSVYQ+++G+TKE
Sbjct: 315 DNPERPECNNLLSVYQLVSGKTKE 338


>ref|XP_002304617.1| predicted protein [Populus trichocarpa] gi|222842049|gb|EEE79596.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  154 bits (390), Expect = 5e-36
 Identities = 73/84 (86%), Positives = 79/84 (94%)
 Frame = -2

Query: 253 VPEPLIPPTGARVMSLTDGMSKMSKSAPSELSRINLLDPKDVIVNKIKRCKTDSFSGLEF 74
           VPEPLIPP GARVMSLTDG+SKMSKSAPS+ SRINLLDPKDVI NKIKRCKTDSF  LEF
Sbjct: 246 VPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIANKIKRCKTDSFPALEF 305

Query: 73  DNPERPECNNLLSVYQIITGRTKE 2
           DNPERPECNNLLSVYQ+++G+TKE
Sbjct: 306 DNPERPECNNLLSVYQLVSGKTKE 329


>ref|XP_003569783.1| PREDICTED: tryptophanyl-tRNA synthetase-like isoform 3
           [Brachypodium distachyon]
          Length = 393

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/84 (89%), Positives = 79/84 (94%)
 Frame = -2

Query: 253 VPEPLIPPTGARVMSLTDGMSKMSKSAPSELSRINLLDPKDVIVNKIKRCKTDSFSGLEF 74
           VPE LIPP GARVMSLTDG+SKMSKSAPS+ SRINLLDPKDVIVNKIKRCKTDS  GLEF
Sbjct: 236 VPEALIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIVNKIKRCKTDSLPGLEF 295

Query: 73  DNPERPECNNLLSVYQIITGRTKE 2
           DNPERPEC+NLLSVYQIITG+TKE
Sbjct: 296 DNPERPECSNLLSVYQIITGKTKE 319


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