BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023477
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...   297   2e-78
emb|CBI20513.3| unnamed protein product [Vitis vinifera]              297   2e-78
ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2...   286   2e-75
ref|XP_002522838.1| pentatricopeptide repeat-containing protein,...   269   5e-70
ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containi...   262   5e-68

>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Vitis vinifera]
          Length = 848

 Score =  297 bits (760), Expect = 2e-78
 Identities = 146/247 (59%), Positives = 187/247 (75%)
 Frame = -3

Query: 743  AIEESFEFDLVHPIYSVIRRHNLKPNDEAFRILIQLFVKMKDFEGAYNMLNDLKEMNMKP 564
            A EESFEF+LVH IYSVI   +L+PN E FRI+I L VKMKDF+GAY++L D+K++N+ P
Sbjct: 442  ASEESFEFNLVHRIYSVICHQSLEPNCETFRIMINLHVKMKDFDGAYDLLKDMKKINLTP 501

Query: 563  TTYMYNAILGGHFREKNFHAVELVLAQMKGADVKPDCQTFSYLISNSECEQDIVKYYEVM 384
            T  +YNAI+GG+FREKN +   +VL QM  ADVKPD QTF YL++N ECE+DI+KYYE +
Sbjct: 502  TAGIYNAIMGGYFREKNIYGGLMVLKQMGDADVKPDSQTFCYLLNNCECEEDIIKYYEKL 561

Query: 383  QAAKVPATKHIYMALINAYVNCGQFKKAKQVVLDKGLPAKSMNEVKSVCVSALASCGQMS 204
            + A V  TKH++MALINAY +CGQF+KAKQVVLDKG+P KS+NE+KSV VSALA  GQ+S
Sbjct: 562  KCAGVQVTKHVFMALINAYASCGQFEKAKQVVLDKGVPIKSLNEIKSVLVSALALHGQIS 621

Query: 203  DALELYEEIKQAGCHLEPKAVISLIEHLQSEGDLNTXXXXXXXXXXXXXXFNGCERVVGY 24
            DA ++YEEIK +G +LEPKA+I LIE+ QSEGDL                  G  R++ Y
Sbjct: 622  DAFDIYEEIKNSGFNLEPKAIILLIEYHQSEGDLTRLLQLLEELNDPDYRVEGSCRILLY 681

Query: 23   CIRHKHI 3
            C+R+ H+
Sbjct: 682  CVRYNHL 688


>emb|CBI20513.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  297 bits (760), Expect = 2e-78
 Identities = 146/247 (59%), Positives = 187/247 (75%)
 Frame = -3

Query: 743 AIEESFEFDLVHPIYSVIRRHNLKPNDEAFRILIQLFVKMKDFEGAYNMLNDLKEMNMKP 564
           A EESFEF+LVH IYSVI   +L+PN E FRI+I L VKMKDF+GAY++L D+K++N+ P
Sbjct: 212 ASEESFEFNLVHRIYSVICHQSLEPNCETFRIMINLHVKMKDFDGAYDLLKDMKKINLTP 271

Query: 563 TTYMYNAILGGHFREKNFHAVELVLAQMKGADVKPDCQTFSYLISNSECEQDIVKYYEVM 384
           T  +YNAI+GG+FREKN +   +VL QM  ADVKPD QTF YL++N ECE+DI+KYYE +
Sbjct: 272 TAGIYNAIMGGYFREKNIYGGLMVLKQMGDADVKPDSQTFCYLLNNCECEEDIIKYYEKL 331

Query: 383 QAAKVPATKHIYMALINAYVNCGQFKKAKQVVLDKGLPAKSMNEVKSVCVSALASCGQMS 204
           + A V  TKH++MALINAY +CGQF+KAKQVVLDKG+P KS+NE+KSV VSALA  GQ+S
Sbjct: 332 KCAGVQVTKHVFMALINAYASCGQFEKAKQVVLDKGVPIKSLNEIKSVLVSALALHGQIS 391

Query: 203 DALELYEEIKQAGCHLEPKAVISLIEHLQSEGDLNTXXXXXXXXXXXXXXFNGCERVVGY 24
           DA ++YEEIK +G +LEPKA+I LIE+ QSEGDL                  G  R++ Y
Sbjct: 392 DAFDIYEEIKNSGFNLEPKAIILLIEYHQSEGDLTRLLQLLEELNDPDYRVEGSCRILLY 451

Query: 23  CIRHKHI 3
           C+R+ H+
Sbjct: 452 CVRYNHL 458


>ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1|
            predicted protein [Populus trichocarpa]
          Length = 784

 Score =  286 bits (733), Expect = 2e-75
 Identities = 145/247 (58%), Positives = 183/247 (74%)
 Frame = -3

Query: 743  AIEESFEFDLVHPIYSVIRRHNLKPNDEAFRILIQLFVKMKDFEGAYNMLNDLKEMNMKP 564
            A EESF+F+LV  IYS+I   +L PN+E FR +I L VKMKDFEGAY +L+DLK++N+ P
Sbjct: 377  ASEESFDFNLVRRIYSLIYHLDLTPNNETFRSMISLSVKMKDFEGAYGLLDDLKKLNLAP 436

Query: 563  TTYMYNAILGGHFREKNFHAVELVLAQMKGADVKPDCQTFSYLISNSECEQDIVKYYEVM 384
            T  MYNAI+GG+FREKN     +VL QMK ADVKPD  ++SYLISN   E++I+KYYE M
Sbjct: 437  TASMYNAIMGGYFREKNIRGALMVLKQMKLADVKPDSSSYSYLISNCNNEEEIIKYYEEM 496

Query: 383  QAAKVPATKHIYMALINAYVNCGQFKKAKQVVLDKGLPAKSMNEVKSVCVSALASCGQMS 204
            + A +  +K I+MALINAY  CGQF+KAKQV+LDK  P K +NE++SV VSALAS GQM+
Sbjct: 497  KVAGIQVSKQIFMALINAYATCGQFEKAKQVLLDKEFPIKHLNEIRSVLVSALASHGQMT 556

Query: 203  DALELYEEIKQAGCHLEPKAVISLIEHLQSEGDLNTXXXXXXXXXXXXXXFNGCERVVGY 24
            DAL LYEE+KQAG +LEPKAVISLIEH+ SEG+ +                +GC RV+ Y
Sbjct: 557  DALNLYEEMKQAGSNLEPKAVISLIEHVDSEGEQSRLLKLLEELDDHNYWVDGCFRVILY 616

Query: 23   CIRHKHI 3
            CIR+K +
Sbjct: 617  CIRNKDL 623


>ref|XP_002522838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223537922|gb|EEF39536.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 867

 Score =  269 bits (687), Expect = 5e-70
 Identities = 139/247 (56%), Positives = 180/247 (72%)
 Frame = -3

Query: 743  AIEESFEFDLVHPIYSVIRRHNLKPNDEAFRILIQLFVKMKDFEGAYNMLNDLKEMNMKP 564
            A EESFEF+LV  IYS+I  HNL PN+E FR +I+L VKMKDF GA++ML+DLK+  + P
Sbjct: 471  ACEESFEFNLVQQIYSLICHHNLTPNNETFRSMIKLRVKMKDFCGAHDMLDDLKKFKLTP 530

Query: 563  TTYMYNAILGGHFREKNFHAVELVLAQMKGADVKPDCQTFSYLISNSECEQDIVKYYEVM 384
            T  MYNAI+ G FREKN +   +VL +M+ ADVKPD QT+S LI+N   E  I KYYE +
Sbjct: 531  TASMYNAIMAGCFREKNINGGLMVLKKMELADVKPDSQTYSNLIANCNSENQISKYYEEL 590

Query: 383  QAAKVPATKHIYMALINAYVNCGQFKKAKQVVLDKGLPAKSMNEVKSVCVSALASCGQMS 204
            +   +  +K I+MALINAY  CGQF+KAKQV+LDKG+P +++ E+KS  VSALAS GQMS
Sbjct: 591  KFVGIHVSKQIFMALINAYATCGQFEKAKQVLLDKGIPIENVIEIKSALVSALASHGQMS 650

Query: 203  DALELYEEIKQAGCHLEPKAVISLIEHLQSEGDLNTXXXXXXXXXXXXXXFNGCERVVGY 24
            DAL +YEEIK+AG ++EPK+VI LIEH QSEG+L+                +GC RV+ +
Sbjct: 651  DALVVYEEIKEAGGNMEPKSVICLIEHYQSEGELSRLLKLLEELQDPNYCVDGCCRVMLW 710

Query: 23   CIRHKHI 3
            CIR+KH+
Sbjct: 711  CIRNKHL 717


>ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Cucumis sativus]
          Length = 1295

 Score =  262 bits (670), Expect = 5e-68
 Identities = 133/248 (53%), Positives = 180/248 (72%), Gaps = 1/248 (0%)
 Frame = -3

Query: 743  AIEESFEFDLVHPIYSVIRRHNLKPNDEAFRILIQLFVKMKDFEGAYNMLNDLKEMNMKP 564
            A++ES E++LVH +YS+I RHNLKP+ E  R +I L VKMKDF+GAY+ML + ++MN+ P
Sbjct: 893  ALDESCEYNLVHQVYSLICRHNLKPDSEILRGMINLHVKMKDFKGAYDMLKEWEKMNVIP 952

Query: 563  TTYMYNAILGGHFREKNFHAVELVLAQMKGADVKPDCQTFSYLISNSECEQDIVKYYEVM 384
            TT +YNAI+ G+FREKN     +VL QM+ ADVKPD  TFSYLISN ECE+DI+KYY+ +
Sbjct: 953  TTNLYNAIMAGYFREKNTSDGFMVLKQMELADVKPDSITFSYLISNCECEEDIIKYYKEL 1012

Query: 383  QAAKVPATKHIYMALINAYVNCGQFKKAKQVVLDKGLPAKSMNEVKSVCVSALASCGQMS 204
              + V ATKH++MALINAY   GQF+KAKQV+ D+G+P K++NEV+ V VSALAS GQ +
Sbjct: 1013 NHSGVQATKHVFMALINAYAAHGQFEKAKQVISDEGIPVKNLNEVRCVLVSALASNGQTA 1072

Query: 203  DALELYEEIKQAGCHLEPKAVISLIEHLQSEGDLN-TXXXXXXXXXXXXXXFNGCERVVG 27
            DAL++Y+E+KQAGC L+ KAV SLIEH   +G LN                 + C R++ 
Sbjct: 1073 DALKIYDEMKQAGCDLDCKAVSSLIEHYPFDGPLNRMLQLLGDLHHDLNGWIHCCSRIIL 1132

Query: 26   YCIRHKHI 3
            + ++H  +
Sbjct: 1133 FSVKHNDL 1140