BLASTX nr result
ID: Coptis21_contig00023468
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023468 (217 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002875056.1| ATRNL [Arabidopsis lyrata subsp. lyrata] gi|... 114 1e-23 ref|XP_002868555.1| AT.I.24-9 protein [Arabidopsis lyrata subsp.... 114 1e-23 ref|XP_002889673.1| ATRNL [Arabidopsis lyrata subsp. lyrata] gi|... 113 1e-23 gb|AAF79821.1|AC026875_1 T6D22.1 [Arabidopsis thaliana] 112 2e-23 gb|AAB07881.1| AT.I.24-9 gene product, partial [Arabidopsis thal... 112 2e-23 >ref|XP_002875056.1| ATRNL [Arabidopsis lyrata subsp. lyrata] gi|297320893|gb|EFH51315.1| ATRNL [Arabidopsis lyrata subsp. lyrata] Length = 1064 Score = 114 bits (284), Expect = 1e-23 Identities = 53/72 (73%), Positives = 63/72 (87%) Frame = -2 Query: 216 LIRNGLSILFNKGHSAYKNYYLKQMKMWNVSAGKQRQLGKMLDEWAAYIQKKCWDNQLSS 37 LIRNGLSILF +G +AYK YYL+QMK+W S GKQ++L KMLDEWAAYI++KC ++QLSS Sbjct: 513 LIRNGLSILFKEGPAAYKTYYLRQMKIWGTSDGKQKELTKMLDEWAAYIRRKCGNDQLSS 572 Query: 36 SVYLSEAEPFLE 1 S YLSEAEPFLE Sbjct: 573 STYLSEAEPFLE 584 >ref|XP_002868555.1| AT.I.24-9 protein [Arabidopsis lyrata subsp. lyrata] gi|297314391|gb|EFH44814.1| AT.I.24-9 protein [Arabidopsis lyrata subsp. lyrata] Length = 768 Score = 114 bits (284), Expect = 1e-23 Identities = 53/72 (73%), Positives = 63/72 (87%) Frame = -2 Query: 216 LIRNGLSILFNKGHSAYKNYYLKQMKMWNVSAGKQRQLGKMLDEWAAYIQKKCWDNQLSS 37 LIRNGLSILF +G +AYK YYL+QMK+W S GKQ++L KMLDEWAAYI++KC ++QLSS Sbjct: 217 LIRNGLSILFKEGPAAYKTYYLRQMKIWGTSDGKQKELTKMLDEWAAYIRRKCGNDQLSS 276 Query: 36 SVYLSEAEPFLE 1 S YLSEAEPFLE Sbjct: 277 STYLSEAEPFLE 288 >ref|XP_002889673.1| ATRNL [Arabidopsis lyrata subsp. lyrata] gi|297335515|gb|EFH65932.1| ATRNL [Arabidopsis lyrata subsp. lyrata] Length = 1096 Score = 113 bits (283), Expect = 1e-23 Identities = 53/72 (73%), Positives = 63/72 (87%) Frame = -2 Query: 216 LIRNGLSILFNKGHSAYKNYYLKQMKMWNVSAGKQRQLGKMLDEWAAYIQKKCWDNQLSS 37 LIRNGLSILF +G +AYK YYL+QMK+W S GKQ++L KMLDEWAAYI++KC ++QLSS Sbjct: 545 LIRNGLSILFKEGPAAYKTYYLRQMKIWGTSDGKQKELCKMLDEWAAYIRRKCGNDQLSS 604 Query: 36 SVYLSEAEPFLE 1 S YLSEAEPFLE Sbjct: 605 STYLSEAEPFLE 616 >gb|AAF79821.1|AC026875_1 T6D22.1 [Arabidopsis thaliana] Length = 1417 Score = 112 bits (281), Expect = 2e-23 Identities = 53/72 (73%), Positives = 62/72 (86%) Frame = -2 Query: 216 LIRNGLSILFNKGHSAYKNYYLKQMKMWNVSAGKQRQLGKMLDEWAAYIQKKCWDNQLSS 37 LIRNGLSILF G +AYK YYL+QMK+W S GKQ++L KMLDEWAAYI++KC ++QLSS Sbjct: 856 LIRNGLSILFKDGAAAYKTYYLRQMKIWGTSDGKQKELCKMLDEWAAYIRRKCGNDQLSS 915 Query: 36 SVYLSEAEPFLE 1 S YLSEAEPFLE Sbjct: 916 STYLSEAEPFLE 927 >gb|AAB07881.1| AT.I.24-9 gene product, partial [Arabidopsis thaliana] Length = 822 Score = 112 bits (281), Expect = 2e-23 Identities = 53/72 (73%), Positives = 62/72 (86%) Frame = -2 Query: 216 LIRNGLSILFNKGHSAYKNYYLKQMKMWNVSAGKQRQLGKMLDEWAAYIQKKCWDNQLSS 37 LIRNGLSILF G +AYK YYL+QMK+W S GKQ++L KMLDEWAAYI++KC ++QLSS Sbjct: 272 LIRNGLSILFKDGAAAYKTYYLRQMKIWGTSDGKQKELCKMLDEWAAYIRRKCGNDQLSS 331 Query: 36 SVYLSEAEPFLE 1 S YLSEAEPFLE Sbjct: 332 STYLSEAEPFLE 343