BLASTX nr result

ID: Coptis21_contig00023453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023453
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521500.1| PREDICTED: nuclear transcription factor Y su...    88   8e-16
ref|XP_002322775.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_003554475.1| PREDICTED: nuclear transcription factor Y su...    84   2e-14
dbj|BAG50060.1| transcription factor CCAAT [Lotus japonicus]           82   6e-14
gb|AFK49644.1| nuclear transcription factor Y subunit A2 [Medica...    81   8e-14

>ref|XP_003521500.1| PREDICTED: nuclear transcription factor Y subunit A-10 isoform 1
           [Glycine max] gi|356505445|ref|XP_003521501.1|
           PREDICTED: nuclear transcription factor Y subunit A-10
           isoform 2 [Glycine max]
          Length = 328

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/85 (51%), Positives = 57/85 (67%)
 Frame = -3

Query: 286 SGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHLRSSAFHSLS 107
           SGS SSE LQSE    N SK+  G   ++SGSEVTS+YSRG LD +  +HL  SA HS +
Sbjct: 243 SGSQSSEFLQSEVGTFNSSKETNGSSPNISGSEVTSMYSRGGLDSFSLNHL-GSAVHSFA 301

Query: 106 NIIDSGQGISTSNRWVTAADGCCDL 32
           ++ID G+G+    +WV AA  CC+L
Sbjct: 302 DMIDGGRGMIIPTKWVAAAGNCCNL 326


>ref|XP_002322775.1| predicted protein [Populus trichocarpa] gi|222867405|gb|EEF04536.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/88 (48%), Positives = 56/88 (63%)
 Frame = -3

Query: 295 SPPSGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHLRSSAFH 116
           S  +GS +SEVL+S    LN S +  GG S  SGSEVTS+Y+RG+LD    + L    FH
Sbjct: 186 SQATGSQNSEVLESGGATLNSSMEANGGGSIFSGSEVTSMYNRGELDLLQINRL-GPTFH 244

Query: 115 SLSNIIDSGQGISTSNRWVTAADGCCDL 32
           S S ++D G GI   ++WV AAD CC+L
Sbjct: 245 SFSGMMDRGHGIVMPSKWVAAADNCCNL 272


>ref|XP_003554475.1| PREDICTED: nuclear transcription factor Y subunit A-10-like
           [Glycine max]
          Length = 330

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/85 (51%), Positives = 56/85 (65%)
 Frame = -3

Query: 286 SGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHLRSSAFHSLS 107
           S S SSE LQSE   LN SK+  G   ++SGSEVTS+YSRG LD +  +HL  SA HS +
Sbjct: 245 SDSQSSEFLQSEVGTLNSSKETNGSSPNISGSEVTSMYSRGGLDSFSLNHL-GSAVHSFA 303

Query: 106 NIIDSGQGISTSNRWVTAADGCCDL 32
           N+ID G+G+    +WV AA  C +L
Sbjct: 304 NMIDGGRGMIIPPKWVAAAGNCYNL 328


>dbj|BAG50060.1| transcription factor CCAAT [Lotus japonicus]
          Length = 332

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/85 (50%), Positives = 55/85 (64%)
 Frame = -3

Query: 286 SGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHLRSSAFHSLS 107
           S S SSEVLQSE   LN SK+  G   ++SGSEVTS+ S G LD +  +HL S+  HSL+
Sbjct: 246 SASQSSEVLQSEVGTLNSSKETNGSSPNISGSEVTSMCSLGGLDSFAVNHLGSAIHHSLA 305

Query: 106 NIIDSGQGISTSNRWVTAADGCCDL 32
           ++ID G GI    +WV AA  C +L
Sbjct: 306 DMIDGGHGIIMPTKWVGAAGSCFNL 330


>gb|AFK49644.1| nuclear transcription factor Y subunit A2 [Medicago truncatula]
          Length = 333

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/85 (50%), Positives = 59/85 (69%)
 Frame = -3

Query: 286 SGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHLRSSAFHSLS 107
           SGS SSE+L+S+   LN SK+  G   ++SGSEVTSLYSRG+ D +  DHL SS   S++
Sbjct: 249 SGSQSSELLESDVGTLNSSKETNGSSPNISGSEVTSLYSRGNHDSFTVDHLGSSVL-SMA 307

Query: 106 NIIDSGQGISTSNRWVTAADGCCDL 32
           ++ID G+G+    +WV AA  CC+L
Sbjct: 308 DMIDGGRGVIMPTKWV-AAGNCCNL 331


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