BLASTX nr result

ID: Coptis21_contig00023447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023447
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259...    89   5e-16
ref|XP_002303175.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
emb|CAN73427.1| hypothetical protein VITISV_033236 [Vitis vinifera]    78   1e-12
ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223...    76   4e-12
ref|XP_003547059.1| PREDICTED: uncharacterized protein LOC100805...    71   2e-10

>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
          Length = 2197

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
 Frame = -1

Query: 575  WLQERKSSTIGYNPVNLVEKFESMDIETNSGNAAKKTSRVTNNDSNNSRFMDTH-GSTPT 399
            WL+ER S ++      LV + +SM I    G+A KK  R   + + +S   + +    P 
Sbjct: 2101 WLRERSSPSVACAQCRLVAELKSMSITGGKGDAKKKIPRKKLSKACSSVVCEDYCNHRPK 2160

Query: 398  IGSFMSNAREACTLPVLIGASPVCYGIPTSIRNKKTS 288
            IGSFMS AREACTLP LIGASPVCYG+PT IR KK S
Sbjct: 2161 IGSFMSQAREACTLPFLIGASPVCYGVPTGIRKKKDS 2197


>ref|XP_002303175.1| predicted protein [Populus trichocarpa] gi|222840607|gb|EEE78154.1|
           predicted protein [Populus trichocarpa]
          Length = 713

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 48/96 (50%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
 Frame = -1

Query: 575 WLQERKSSTIGYNPVNLVEK-FESMDIETNSGNAAKKTSRVTNNDS-NNSRFMDTHGSTP 402
           WL+ER S ++G +  NLV K FE+M+I+   G A KK  +     + +    +++    P
Sbjct: 616 WLKERSSVSLGCDQCNLVAKEFEAMNIKAGKGKAKKKVPKTKAAGTFDGGVVINSCDHRP 675

Query: 401 TIGSFMSNAREACTLPVLIGASPVCYGIPTSIRNKK 294
            IG+FM  AREACTLP LIGASPVCYGIPTSI  KK
Sbjct: 676 KIGAFMGQAREACTLPFLIGASPVCYGIPTSIGIKK 711


>emb|CAN73427.1| hypothetical protein VITISV_033236 [Vitis vinifera]
          Length = 489

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 45/97 (46%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
 Frame = -1

Query: 575 WLQERKSSTIGYNPVNLVEKFESMDIETNSGNAAKKTSRVTNNDSNNSRFMDTHGSTPT- 399
           WL+ER S         LV + +SM I    GNA KK  R   + + +S   + +    T 
Sbjct: 393 WLRERSSPXXACAQCRLVAELKSMSITGGKGNAKKKIPRKKLSKACSSVVCEDYXXHRTK 452

Query: 398 IGSFMSNAREACTLPVLIGASPVCYGIPTSIRNKKTS 288
           IGSFMS AREACTL   IGAS VCYG+PT IR +K S
Sbjct: 453 IGSFMSQAREACTLSFFIGASXVCYGVPTGIRKRKDS 489


>ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223531543|gb|EEF33373.1|
            separase, putative [Ricinus communis]
          Length = 2153

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
 Frame = -1

Query: 575  WLQERKSSTIGYNPVNLV-EKFESMDIETNSGNAAKKTSRVTNNDS-NNSRFMDTHGSTP 402
            WL+ER  ++      NL+ E+FE+M+++       K+  +    ++ +     ++    P
Sbjct: 2056 WLKERSIASSDCIQCNLLAEEFEAMNLKDRKVATKKRVQKKKEPETCDGDALKNSCNHRP 2115

Query: 401  TIGSFMSNAREACTLPVLIGASPVCYGIPTSIRNKK 294
             IGSFMS AREAC LP LIGASPVCYG+PT IR KK
Sbjct: 2116 KIGSFMSQAREACRLPYLIGASPVCYGVPTGIRRKK 2151


>ref|XP_003547059.1| PREDICTED: uncharacterized protein LOC100805306 [Glycine max]
          Length = 2185

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
 Frame = -1

Query: 575  WLQERKSSTIGYNPVNLV-EKFESMDIETNSGNAAKKTSRVTNNDSNNSRFMDTHGSTPT 399
            WL+ER          NL+ E+FE+M+++   G A +K  R    +   S      G    
Sbjct: 2073 WLKERSDMPTECLQCNLLSEEFEAMNLKGCKGRAKRKAPRKKLLELAESESPKNCGHRRK 2132

Query: 398  IGSFMSNAREACTLPVLIGASPVCYGIPTSIRNK 297
            IG+FM  ARE CTLP L GASPVCYG+PT I  K
Sbjct: 2133 IGAFMGQAREVCTLPFLTGASPVCYGVPTGIWRK 2166


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