BLASTX nr result

ID: Coptis21_contig00023438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023438
         (1072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76673.1| hypothetical protein VITISV_011790 [Vitis vinifera]   156   1e-35
ref|XP_002272609.1| PREDICTED: uncharacterized protein LOC100258...   155   2e-35
ref|XP_002316042.1| predicted protein [Populus trichocarpa] gi|2...   130   6e-28
ref|XP_002523498.1| ATP binding protein, putative [Ricinus commu...   121   3e-25
ref|XP_002519223.1| conserved hypothetical protein [Ricinus comm...   114   5e-23

>emb|CAN76673.1| hypothetical protein VITISV_011790 [Vitis vinifera]
          Length = 1338

 Score =  156 bits (394), Expect = 1e-35
 Identities = 115/338 (34%), Positives = 166/338 (49%), Gaps = 22/338 (6%)
 Frame = +2

Query: 2    IDAFDQKPWKYPGVDVTDFFNFGLDEESWKHYCNNLEQFRQQSNMLTMTNQVYGAGFWRQ 181
            ID F+QKPW++PGVD+TDFFNFG +EE+WK+YCN+LEQ+R+Q  +L  T  V+ +    Q
Sbjct: 218  IDTFEQKPWRHPGVDLTDFFNFGFNEETWKNYCNSLEQYRKQMXILNQT-PVHHSSKPNQ 276

Query: 182  T----LAPESLGESAQTGQEGEVSPVLNNVVGGERSLEIPIGRAIRVEDSIGERRPSMDI 349
            T    L  E  G+     Q   VSP   +       LE+P GRAI+VE S GER+PSMD+
Sbjct: 277  TEEGGLEHEKDGQEPVCKQGSIVSPTSKST----DRLELPKGRAIQVEGSTGERQPSMDV 332

Query: 350  RRPRNQDIDVVIEIPVQDVRECSFSSDSEALNSCNSKLNASENGVSSMDFPQPAYSAEST 529
            RRPR++D  VVI I VQD      S D E  N  +++  +SENG   +   +  +   S 
Sbjct: 333  RRPRHRDSGVVIHIAVQD------SVDDEIDNIDSTEDESSENGDFKVGDNKDIHCYGSG 386

Query: 530  DSGRSQSDADFVKDVGICSLSVRRCSQPRTGWNEVVTDPDGQGIEGSP--------NVNG 685
            +  +   + +   D    S  ++R S+  T  N V  D D  G    P        N+N 
Sbjct: 387  NGNKPCLEKNVTLD---RSSVLKRFSKXSTASNPVSVDSDNVGTGKIPDGDKHCSQNMNA 443

Query: 686  ----------CHLHKEREEIQKNPYKTDPYTLEAESPLVDRIQHAXXXXXXXXXXXXXXI 835
                        L+  RE + +N   TDP  +E E  L +++ H+               
Sbjct: 444  HVPEGISEVXDALNNSREMVGRNTCNTDPCMMETELSLDEQVSHSPSSSRRGSHSEASQD 503

Query: 836  GTGVSKEKIHKHARKQSSNSISGLRAIVTSGWNHSKDS 949
            G  +  EK     RK SSN ++    ++ S +   K+S
Sbjct: 504  GGYIDPEKNQNARRKPSSNLLTDRPELIKSEYYLHKNS 541


>ref|XP_002272609.1| PREDICTED: uncharacterized protein LOC100258583 [Vitis vinifera]
            gi|296083247|emb|CBI22883.3| unnamed protein product
            [Vitis vinifera]
          Length = 1300

 Score =  155 bits (391), Expect = 2e-35
 Identities = 114/338 (33%), Positives = 167/338 (49%), Gaps = 22/338 (6%)
 Frame = +2

Query: 2    IDAFDQKPWKYPGVDVTDFFNFGLDEESWKHYCNNLEQFRQQSNMLTMTNQVYGAGFWRQ 181
            ID F+QKPW++PGVD+TDFFNFG +EE+WK+YCN+LEQ+R+Q ++L  T  V+ +    Q
Sbjct: 218  IDTFEQKPWRHPGVDLTDFFNFGFNEETWKNYCNSLEQYRKQMHILNQT-PVHHSSKPNQ 276

Query: 182  T----LAPESLGESAQTGQEGEVSPVLNNVVGGERSLEIPIGRAIRVEDSIGERRPSMDI 349
            T    L  E  G+     Q   VSP   +       LE+P GRAI+VE S GER+PSMD+
Sbjct: 277  TEEGGLEHEKDGQEPVCKQGSIVSPTSKST----DRLELPKGRAIQVEGSTGERQPSMDV 332

Query: 350  RRPRNQDIDVVIEIPVQDVRECSFSSDSEALNSCNSKLNASENGVSSMDFPQPAYSAEST 529
            RRPR++D  VVI I VQD      S D E  N  +++  +SENG   +   +  +   S 
Sbjct: 333  RRPRHRDSGVVIHIAVQD------SVDDEIDNIDSTEDESSENGDFKVGDNKDIHCYGSG 386

Query: 530  DSGRSQSDADFVKDVGICSLSVRRCSQPRTGWNEVVTDPDGQGIEGSP--------NVNG 685
            +  +   + +   D    S  ++R S+  T  N V  D D  G    P        N+N 
Sbjct: 387  NGNKPCLEKNVTLD---RSSVLKRFSKLSTASNPVSVDSDNVGTGKIPDGDKHCSQNMNA 443

Query: 686  ----------CHLHKEREEIQKNPYKTDPYTLEAESPLVDRIQHAXXXXXXXXXXXXXXI 835
                        L+  +E + +N   TDP  +E E  L +++ H+               
Sbjct: 444  HVPEGISEVLDALNNSKEMVGRNTCNTDPCMMETELSLDEQVSHSPSSSRRGSHSVASQD 503

Query: 836  GTGVSKEKIHKHARKQSSNSISGLRAIVTSGWNHSKDS 949
            G  +  EK     RK SSN ++    ++ S +   K+S
Sbjct: 504  GGYIDPEKNQNARRKPSSNLLTDRPELIKSEYYLHKNS 541


>ref|XP_002316042.1| predicted protein [Populus trichocarpa] gi|222865082|gb|EEF02213.1|
            predicted protein [Populus trichocarpa]
          Length = 1253

 Score =  130 bits (327), Expect = 6e-28
 Identities = 93/279 (33%), Positives = 137/279 (49%), Gaps = 21/279 (7%)
 Frame = +2

Query: 2    IDAFDQKPWKYPGVDVTDFFNFGLDEESWKHYCNNLEQFRQQSNMLTMTNQVYGAGFWRQ 181
            IDAF++K W+YPGVD+++FFNFG +E+SWK YC +LEQ+ QQS M    + ++ +   + 
Sbjct: 233  IDAFEEKQWRYPGVDISNFFNFGFNEDSWKQYCMSLEQYGQQSYMHGAMSILHSS---KS 289

Query: 182  TLAPESLGESAQTGQEGEVSPVLNN---VVGGERSLEIPIGRAIRVEDSIGERRPSMDIR 352
            T A E   E         +S V ++      G + L +  GRAI+VEDS GER+P+MD+R
Sbjct: 290  TQAYEFRPEQNSIAIADHISQVDSSSEYADRGGKQLGLRKGRAIQVEDSTGERQPTMDLR 349

Query: 353  RPRNQDIDVVIEIPVQDVRECSFSSDSEALNSCNSKLNASENGVSSMDFPQPAYSAESTD 532
            RPR  D DVVI+I VQD  + S  S  E     +S ++++E G S           ++  
Sbjct: 350  RPRVWDSDVVIKINVQDSNDNSSQSSMEQ----SSHIDSNEPGASKRRDLNVDDKRDACS 405

Query: 533  SGRSQSDADFVKDVGICSLSVRRCSQPRTGWNEVVTDPDGQGIEGSPNVNGCHLHK---- 700
            SG +  D    + +        RC Q  +  N++  + D        N +G H  K    
Sbjct: 406  SGSASRDEPSAESLE----GNLRCFQSMSVSNKMSPNTDNYEANQISNADGYHHQKENAH 461

Query: 701  --------------EREEIQKNPYKTDPYTLEAESPLVD 775
                          E EEI +   K+D +  E E  L D
Sbjct: 462  SSEGIAEKMETVDEEEEEIDRKECKSDQFLSEPELSLSD 500


>ref|XP_002523498.1| ATP binding protein, putative [Ricinus communis]
           gi|223537205|gb|EEF38837.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1365

 Score =  121 bits (303), Expect = 3e-25
 Identities = 72/164 (43%), Positives = 97/164 (59%), Gaps = 13/164 (7%)
 Frame = +2

Query: 2   IDAFDQKPWKYPGVDVTDFFNFGLDEESWKHYCNNLEQFRQQSNMLTMTNQVYGAGFWRQ 181
           ID+F++KPWKYPGVD++DFFNFGL+EESWK YC  LEQ R ++ M +   +VY +G   Q
Sbjct: 373 IDSFEEKPWKYPGVDMSDFFNFGLNEESWKDYCKQLEQHRLETTMQSKI-RVYESGRAEQ 431

Query: 182 TLAPESLGESAQTGQEGEVSPVLNNVVG----GERSL---------EIPIGRAIRVEDSI 322
              P+   E A      +V P  N+ +G    G+  L          +P GRAI+VE   
Sbjct: 432 EYDPDLPPELAAAAGMHDV-PAENSNLGKSDVGQSDLTKGPARMRPPLPTGRAIQVEGGY 490

Query: 323 GERRPSMDIRRPRNQDIDVVIEIPVQDVRECSFSSDSEALNSCN 454
           GER PS+D R PR +D DV+IEI +QD  +   SS +  L+  N
Sbjct: 491 GERLPSIDTRPPRTRDCDVIIEIVLQDSLDDDSSSGNGGLDGEN 534


>ref|XP_002519223.1| conserved hypothetical protein [Ricinus communis]
           gi|223541538|gb|EEF43087.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1155

 Score =  114 bits (284), Expect = 5e-23
 Identities = 65/166 (39%), Positives = 100/166 (60%), Gaps = 7/166 (4%)
 Frame = +2

Query: 2   IDAFDQKPWKYPGVDVTDFFNFGLDEESWKHYCNNLEQFRQQSNMLTMTNQVYGAGFWRQ 181
           IDAF++K W+ PGVDV+DFFNFG +E+SWK YC +LE+ R++     M ++     F++ 
Sbjct: 189 IDAFEEKRWRCPGVDVSDFFNFGFNEDSWKQYCISLEKLRKRP---YMRSKSLNQEFFKH 245

Query: 182 TLAPESLGESAQTGQE------GEVSPVLNNVVGGERSLEIPIGRAIRVEDSIGERRPSM 343
             A E++ +  +  +E       +    +  +  GER + +P  R I+VEDS  ER+P+M
Sbjct: 246 AQACEAVTKHEREAKETVVEDSAQAGSSMKFIDLGERLMVLP--RGIQVEDSTAERQPTM 303

Query: 344 DIRRPRNQDIDVVIEIPVQDVRE-CSFSSDSEALNSCNSKLNASEN 478
           D+RRPR  D DVVI+I VQD  E CS S+  + ++     ++ S N
Sbjct: 304 DLRRPRTWDSDVVIQINVQDSNENCSGSNKEDHIDDSGYAISRSMN 349


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