BLASTX nr result
ID: Coptis21_contig00023437
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00023437
(939 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containi... 261 2e-67
emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera] 261 2e-67
emb|CBI16890.3| unnamed protein product [Vitis vinifera] 260 3e-67
ref|XP_002532893.1| pentatricopeptide repeat-containing protein,... 253 4e-65
ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|2... 250 3e-64
>ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 261 bits (667), Expect = 2e-67
Identities = 128/204 (62%), Positives = 159/204 (77%), Gaps = 4/204 (1%)
Frame = +1
Query: 1 MESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELVFDMLDAGFSPNYSVYSW 180
M SA K + KMLE GL DQFT+KALIHGFCK E+D AKE +F+MLDAGFSP+YS YSW
Sbjct: 386 MGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSW 445
Query: 181 ILDGYCNQGNEDAILRLPDEL----LLVDISIYRALIRRFCKGENIVYAQKVFTLMQGKG 348
++D Y +Q N++A++RLPDEL L VDIS+YRALIRR CK + I A+++FTLMQGKG
Sbjct: 446 LVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKG 505
Query: 349 ILGDSVVYTNLAYAYFKAGKPTLVSEMLDDMTKRYLMITVKIYKSLNASFANDSDILRLF 528
+ GDSVVYT+LAYAYFKAGK S+MLD+M KR LMIT+KIY+ +AS+A D IL LF
Sbjct: 506 MKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLF 565
Query: 529 WGHAVERGLITKKVLNLMRQLD*N 600
W H +ER LI+K +L ++QLD N
Sbjct: 566 WDHVIERRLISKNILKYIQQLDVN 589
Score = 59.3 bits (142), Expect = 1e-06
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Frame = +1
Query: 13 WKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELVFDMLDAGFSPNYSVYSWILDG 192
WK KM+ G+V + + LIH CK+ +++KA++L+ +M P+ Y+ ++
Sbjct: 182 WKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISL 241
Query: 193 YCNQGNEDAILRLPDEL----LLVDISIYRALIRRFCKGENIVYAQKVFTLMQGKGILGD 360
YC +G L + D + + DI Y +LI FC+ + A ++F + G +
Sbjct: 242 YCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLF--REINGATPN 299
Query: 361 SVVYTNLAYAY 393
V YT L Y
Sbjct: 300 HVTYTTLIDGY 310
>emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 261 bits (667), Expect = 2e-67
Identities = 128/204 (62%), Positives = 159/204 (77%), Gaps = 4/204 (1%)
Frame = +1
Query: 1 MESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELVFDMLDAGFSPNYSVYSW 180
M SA K + KMLE GL DQFT+KALIHGFCK E+D AKE +F+MLDAGFSP+YS YSW
Sbjct: 386 MGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSW 445
Query: 181 ILDGYCNQGNEDAILRLPDEL----LLVDISIYRALIRRFCKGENIVYAQKVFTLMQGKG 348
++D Y +Q N++A++RLPDEL L VDIS+YRALIRR CK + I A+++FTLMQGKG
Sbjct: 446 LVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKG 505
Query: 349 ILGDSVVYTNLAYAYFKAGKPTLVSEMLDDMTKRYLMITVKIYKSLNASFANDSDILRLF 528
+ GDSVVYT+LAYAYFKAGK S+MLD+M KR LMIT+KIY+ +AS+A D IL LF
Sbjct: 506 MKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLF 565
Query: 529 WGHAVERGLITKKVLNLMRQLD*N 600
W H +ER LI+K +L ++QLD N
Sbjct: 566 WDHVIERRLISKNILKYIQQLDVN 589
Score = 59.3 bits (142), Expect = 1e-06
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Frame = +1
Query: 13 WKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELVFDMLDAGFSPNYSVYSWILDG 192
WK KM+ G+V + + LIH CK+ +++KA++L+ +M P+ Y+ ++
Sbjct: 182 WKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISL 241
Query: 193 YCNQGNEDAILRLPDEL----LLVDISIYRALIRRFCKGENIVYAQKVFTLMQGKGILGD 360
YC +G L + D + + DI Y +LI FC+ + A ++F + G +
Sbjct: 242 YCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLF--REINGATPN 299
Query: 361 SVVYTNLAYAY 393
V YT L Y
Sbjct: 300 HVTYTTLIDGY 310
>emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 260 bits (665), Expect = 3e-67
Identities = 127/202 (62%), Positives = 158/202 (78%), Gaps = 4/202 (1%)
Frame = +1
Query: 1 MESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELVFDMLDAGFSPNYSVYSW 180
M SA K + KMLE GL DQFT+KALIHGFCK E+D AKE +F+MLDAGFSP+YS YSW
Sbjct: 379 MGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSW 438
Query: 181 ILDGYCNQGNEDAILRLPDEL----LLVDISIYRALIRRFCKGENIVYAQKVFTLMQGKG 348
++D Y +Q N++A++RLPDEL L VDIS+YRALIRR CK + I A+++FTLMQGKG
Sbjct: 439 LVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKG 498
Query: 349 ILGDSVVYTNLAYAYFKAGKPTLVSEMLDDMTKRYLMITVKIYKSLNASFANDSDILRLF 528
+ GDSVVYT+LAYAYFKAGK S+MLD+M KR LMIT+KIY+ +AS+A D IL LF
Sbjct: 499 MKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLF 558
Query: 529 WGHAVERGLITKKVLNLMRQLD 594
W H +ER LI+K +L ++QLD
Sbjct: 559 WDHVIERRLISKNILKYIQQLD 580
Score = 65.1 bits (157), Expect = 2e-08
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Frame = +1
Query: 13 WKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELVFDMLDAGFSPNYSVYSWILDG 192
WK KM+ G+V + + LIH CK+ +++KA++L+ +M P+ Y+ ++
Sbjct: 207 WKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISL 266
Query: 193 YCNQGNEDAILRLPDEL----LLVDISIYRALIRRFCKGEN-IVYAQKVFTLMQGKGILG 357
YC +G L + D + + DI Y +LI FC+ N + A ++ +M+ +G+
Sbjct: 267 YCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHP 326
Query: 358 DSVVYTNLAYAYFKAGKPTLVSEMLDDMTKR 450
V Y ++ + GK + +L++M++R
Sbjct: 327 GVVTYNSILRKLCEEGKIKDANRLLNEMSER 357
>ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527353|gb|EEF29498.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 625
Score = 253 bits (647), Expect = 4e-65
Identities = 122/185 (65%), Positives = 149/185 (80%), Gaps = 4/185 (2%)
Frame = +1
Query: 1 MESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELVFDMLDAGFSPNYSVYSW 180
M+SA K +N+M+E GL DQFTYKALIHGFCK REMD AKEL+ MLDAGFSP+Y YSW
Sbjct: 389 MKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSW 448
Query: 181 ILDGYCNQGNEDAILRLPDEL----LLVDISIYRALIRRFCKGENIVYAQKVFTLMQGKG 348
++DGYCNQ NE+A+L+LPDE L VD S+YRALIRRFCK E + YA+K+F+LMQ KG
Sbjct: 449 LVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKG 508
Query: 349 ILGDSVVYTNLAYAYFKAGKPTLVSEMLDDMTKRYLMITVKIYKSLNASFANDSDILRLF 528
LGDSV+YT+LAYAY+K GK S++LD+M KR LMIT+KIY++LNAS+A D+ IL LF
Sbjct: 509 TLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRALNASYAGDNSILSLF 568
Query: 529 WGHAV 543
W H V
Sbjct: 569 WNHVV 573
Score = 63.2 bits (152), Expect = 9e-08
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Frame = +1
Query: 4 ESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELVFDMLDAGFSPNYSVYSWI 183
+ WK KM G+ + Y LIH CK+ +++KA L+ +M P+ Y+ +
Sbjct: 182 DMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTL 241
Query: 184 LDGYCNQGNEDAILRLPDEL----LLVDISIYRALIRRFCKGENIVYAQKVFTLMQGKGI 351
+ YC +G L + D + + DI Y +LI FCK + A ++F + +
Sbjct: 242 ISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLF--KEIRDA 299
Query: 352 LGDSVVYTNLAYAYFKAGKPTLVSEMLDDMTKRYLMITVKIYKSL 486
+ V YT L Y + + ++M + L TV Y S+
Sbjct: 300 TPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSI 344
Score = 62.4 bits (150), Expect = 2e-07
Identities = 54/205 (26%), Positives = 83/205 (40%), Gaps = 39/205 (19%)
Frame = +1
Query: 1 MESAWKFRNKMLEGGLVQDQFTYKAL---------------------------------- 78
+E A ++M + D FTY L
Sbjct: 216 VEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNS 275
Query: 79 -IHGFCKTREMDKAKELVFDMLDAGFSPNYSVYSWILDGYCNQGNEDAILRLPDEL---- 243
IHGFCK M +A L ++ DA +PN+ Y+ ++DGYC + D LRL +E+
Sbjct: 276 LIHGFCKEGRMREAMRLFKEIRDA--TPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQG 333
Query: 244 LLVDISIYRALIRRFCKGENIVYAQKVFTLMQGKGILGDSVVYTNLAYAYFKAGKPTLVS 423
L + Y +++R+ C+ I A K+ M K I D+V L AY K G
Sbjct: 334 LYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSAL 393
Query: 424 EMLDDMTKRYLMITVKIYKSLNASF 498
++ + M + L + YK+L F
Sbjct: 394 KVKNRMVEAGLKLDQFTYKALIHGF 418
>ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|222870764|gb|EEF07895.1|
predicted protein [Populus trichocarpa]
Length = 593
Score = 250 bits (639), Expect = 3e-64
Identities = 121/199 (60%), Positives = 156/199 (78%), Gaps = 4/199 (2%)
Frame = +1
Query: 1 MESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELVFDMLDAGFSPNYSVYSW 180
M SA K ++KM+ GL DQFTYKALIHGFCK +E+DKAKEL+F M+DAGFSP+Y YSW
Sbjct: 395 MRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSW 454
Query: 181 ILDGYCNQGNEDAILRLPDEL----LLVDISIYRALIRRFCKGENIVYAQKVFTLMQGKG 348
++D YC Q NE+A+++LPDEL L VD+S+YRALIRRFCK E I AQ+V LM+ KG
Sbjct: 455 LVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKG 514
Query: 349 ILGDSVVYTNLAYAYFKAGKPTLVSEMLDDMTKRYLMITVKIYKSLNASFANDSDILRLF 528
I GDSVVYT+LAY Y+K GK + S++LD+M K+ LMIT+KIY+S NAS+A+D+ IL LF
Sbjct: 515 IFGDSVVYTSLAYGYWKVGKVNVTSDILDEMYKKRLMITLKIYRSFNASYASDNSILSLF 574
Query: 529 WGHAVERGLITKKVLNLMR 585
W H +ER L++K +L M+
Sbjct: 575 WNHVLERRLMSKNILKDMQ 593
Score = 65.1 bits (157), Expect = 2e-08
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
Frame = +1
Query: 4 ESAWKFRNKMLEGGLVQDQFTYKALIHGFCKTREMDKAKELVFDMLDAGFSPNYSVYSWI 183
++ WK KM++ G+V + Y L+H CK+ +++KA++++ +M P+ Y+ +
Sbjct: 188 DTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTL 247
Query: 184 LDGYCNQGNEDAILRLPDELLLV----DISIYRALIRRFCKGENIVYAQKVFTLMQGKGI 351
+ YC +G L + D + + DI Y +LI FC+ + A ++F + K +
Sbjct: 248 ISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDI--KDV 305
Query: 352 LGDSVVYTNLAYAYFKAGKPTLVSEMLDDMTKRYLMITVKIYKSL 486
+ V YT+L Y + + + M+++ L TV Y S+
Sbjct: 306 TPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSI 350