BLASTX nr result

ID: Coptis21_contig00023427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023427
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529883.1| transcription factor, putative [Ricinus comm...   201   5e-50
ref|XP_002317068.1| jumonji domain protein [Populus trichocarpa]...   187   7e-48
ref|XP_002521976.1| transcription factor, putative [Ricinus comm...   187   1e-47
ref|XP_002271515.2| PREDICTED: probable lysine-specific demethyl...   189   1e-47
emb|CBI39010.3| unnamed protein product [Vitis vinifera]              189   1e-47

>ref|XP_002529883.1| transcription factor, putative [Ricinus communis]
           gi|223530610|gb|EEF32486.1| transcription factor,
           putative [Ricinus communis]
          Length = 935

 Score =  201 bits (511), Expect = 5e-50
 Identities = 92/114 (80%), Positives = 105/114 (92%)
 Frame = -1

Query: 343 TPSILRSEGVPVYRVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQSAVE 164
           +PS+L++EGVPVYRVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL HGQ AVE
Sbjct: 336 SPSVLKAEGVPVYRVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQYAVE 395

Query: 163 LYSEQCRKTSLSHDKLLFEAAQKAVRALWEILHLKKENSGNLNWKSVCGKDGML 2
           LYS+Q RKTS+SHDKLL  +AQ+AV+ALWE+LHL KE  GNL W++VCGKDG+L
Sbjct: 396 LYSKQHRKTSISHDKLLLGSAQEAVQALWELLHLGKETPGNLRWRNVCGKDGLL 449


>ref|XP_002317068.1| jumonji domain protein [Populus trichocarpa]
           gi|222860133|gb|EEE97680.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 753

 Score =  187 bits (476), Expect(2) = 7e-48
 Identities = 89/114 (78%), Positives = 100/114 (87%)
 Frame = -1

Query: 343 TPSILRSEGVPVYRVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQSAVE 164
           +P++L++EGVPVYRVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL HGQ AVE
Sbjct: 331 SPTVLKAEGVPVYRVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQHAVE 390

Query: 163 LYSEQCRKTSLSHDKLLFEAAQKAVRALWEILHLKKENSGNLNWKSVCGKDGML 2
           LYSEQ RKTS+SHDKLL  AAQ+A+ AL E+L L KE   NL W+S CGKDG+L
Sbjct: 391 LYSEQQRKTSISHDKLLMGAAQEAICALKELLLLGKETPENLRWRSACGKDGVL 444



 Score = 28.1 bits (61), Expect(2) = 7e-48
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -2

Query: 405 KNLPDLFEEQPD 370
           K+LPDLFEEQPD
Sbjct: 310 KHLPDLFEEQPD 321


>ref|XP_002521976.1| transcription factor, putative [Ricinus communis]
           gi|223538780|gb|EEF40380.1| transcription factor,
           putative [Ricinus communis]
          Length = 1202

 Score =  187 bits (474), Expect(2) = 1e-47
 Identities = 87/114 (76%), Positives = 99/114 (86%)
 Frame = -1

Query: 343 TPSILRSEGVPVYRVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQSAVE 164
           +PSIL+SEGVPVYR  Q++GEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQ A+E
Sbjct: 460 SPSILKSEGVPVYRCKQNTGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIE 519

Query: 163 LYSEQCRKTSLSHDKLLFEAAQKAVRALWEILHLKKENSGNLNWKSVCGKDGML 2
           LY EQ R+TS+SHDKLL  A+++AVRA WE+  LKK  S NL WK VCGKDG+L
Sbjct: 520 LYREQGRRTSISHDKLLLGASREAVRAHWELNLLKKNTSNNLRWKDVCGKDGIL 573



 Score = 28.1 bits (61), Expect(2) = 1e-47
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -2

Query: 405 KNLPDLFEEQPD 370
           K+LPDLFEEQPD
Sbjct: 439 KHLPDLFEEQPD 450


>ref|XP_002271515.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
           vinifera]
          Length = 1118

 Score =  189 bits (480), Expect(2) = 1e-47
 Identities = 89/114 (78%), Positives = 101/114 (88%)
 Frame = -1

Query: 343 TPSILRSEGVPVYRVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQSAVE 164
           +PS+L+SE VPVYR +Q+SGEF+LTFPRAYHSGFNCGFNCAEAVNVAPVDWL HGQSAVE
Sbjct: 402 SPSVLKSENVPVYRAIQNSGEFILTFPRAYHSGFNCGFNCAEAVNVAPVDWLSHGQSAVE 461

Query: 163 LYSEQCRKTSLSHDKLLFEAAQKAVRALWEILHLKKENSGNLNWKSVCGKDGML 2
           LYSEQCRKTS+SHDKLL  +AQKAV+AL +   L KE+  NL+WKSVCGKDG L
Sbjct: 462 LYSEQCRKTSISHDKLLLASAQKAVQALRDPSVLGKEDQVNLSWKSVCGKDGTL 515



 Score = 25.8 bits (55), Expect(2) = 1e-47
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = -2

Query: 405 KNLPDLFEEQP 373
           K+LPDLFEEQP
Sbjct: 381 KHLPDLFEEQP 391


>emb|CBI39010.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  189 bits (480), Expect(2) = 1e-47
 Identities = 89/114 (78%), Positives = 101/114 (88%)
 Frame = -1

Query: 343 TPSILRSEGVPVYRVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQSAVE 164
           +PS+L+SE VPVYR +Q+SGEF+LTFPRAYHSGFNCGFNCAEAVNVAPVDWL HGQSAVE
Sbjct: 448 SPSVLKSENVPVYRAIQNSGEFILTFPRAYHSGFNCGFNCAEAVNVAPVDWLSHGQSAVE 507

Query: 163 LYSEQCRKTSLSHDKLLFEAAQKAVRALWEILHLKKENSGNLNWKSVCGKDGML 2
           LYSEQCRKTS+SHDKLL  +AQKAV+AL +   L KE+  NL+WKSVCGKDG L
Sbjct: 508 LYSEQCRKTSISHDKLLLASAQKAVQALRDPSVLGKEDQVNLSWKSVCGKDGTL 561



 Score = 25.8 bits (55), Expect(2) = 1e-47
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = -2

Query: 405 KNLPDLFEEQP 373
           K+LPDLFEEQP
Sbjct: 427 KHLPDLFEEQP 437


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