BLASTX nr result

ID: Coptis21_contig00023426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023426
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277536.1| PREDICTED: uncharacterized protein LOC100254...   221   1e-55
emb|CBI30234.3| unnamed protein product [Vitis vinifera]              174   9e-42
gb|ADE76393.1| unknown [Picea sitchensis]                             163   2e-38
gb|ABR16059.1| unknown [Picea sitchensis]                             161   8e-38
ref|XP_002320785.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36

>ref|XP_002277536.1| PREDICTED: uncharacterized protein LOC100254577 [Vitis vinifera]
          Length = 361

 Score =  221 bits (562), Expect = 1e-55
 Identities = 122/217 (56%), Positives = 144/217 (66%), Gaps = 29/217 (13%)
 Frame = -3

Query: 565 MEGRESTVSGSPTQTETESPPMSGVAPQVMNMAVSMSMEPSIRGS--------------- 431
           ME +ESTVSGSP  +E ESPP+SGV PQVMNMA++MSME S+ G                
Sbjct: 1   MEEKESTVSGSPGNSEAESPPVSGVVPQVMNMAINMSMERSLGGGDDGGGVGGNVGGRIS 60

Query: 430 --------GMEMLAKKKRGRPRKYSPDGSMALTLXXXXXXXXXXXS------AKXXXXXX 293
                     ++L +KKRGRPRKY  DG++ L+            S      +K      
Sbjct: 61  GGGGGGSGSFDLLGRKKRGRPRKYDADGNLRLSYAVSPPPGFTLSSPSSDFSSKRGRGRP 120

Query: 292 XXXXXRQLLASLGEWVLNSAGGNFTPHVVTINTGEDIAAKILSLSQKGPRAVCILSANGA 113
                 QLLASLGE   N+AGG+FTPHVVT+NTGED+A+KILS SQKGPR +C+LSANGA
Sbjct: 121 PGSGNWQLLASLGELFANTAGGDFTPHVVTVNTGEDVASKILSFSQKGPRGICVLSANGA 180

Query: 112 VSNVTIRQPGSSGGILTYEGRFEILALSGSFTLSDIG 2
           VSNVTIRQPGSSGGILTYEGRFEIL+LSGSFT+SD G
Sbjct: 181 VSNVTIRQPGSSGGILTYEGRFEILSLSGSFTVSDSG 217


>emb|CBI30234.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  174 bits (442), Expect = 9e-42
 Identities = 94/152 (61%), Positives = 110/152 (72%), Gaps = 7/152 (4%)
 Frame = -3

Query: 436 GSG-MEMLAKKKRGRPRKYSPDGSMALTLXXXXXXXXXXXS------AKXXXXXXXXXXX 278
           GSG  ++L +KKRGRPRKY  DG++ L+            S      +K           
Sbjct: 29  GSGSFDLLGRKKRGRPRKYDADGNLRLSYAVSPPPGFTLSSPSSDFSSKRGRGRPPGSGN 88

Query: 277 RQLLASLGEWVLNSAGGNFTPHVVTINTGEDIAAKILSLSQKGPRAVCILSANGAVSNVT 98
            QLLASLGE   N+AGG+FTPHVVT+NTGED+A+KILS SQKGPR +C+LSANGAVSNVT
Sbjct: 89  WQLLASLGELFANTAGGDFTPHVVTVNTGEDVASKILSFSQKGPRGICVLSANGAVSNVT 148

Query: 97  IRQPGSSGGILTYEGRFEILALSGSFTLSDIG 2
           IRQPGSSGGILTYEGRFEIL+LSGSFT+SD G
Sbjct: 149 IRQPGSSGGILTYEGRFEILSLSGSFTVSDSG 180


>gb|ADE76393.1| unknown [Picea sitchensis]
          Length = 302

 Score =  163 bits (413), Expect = 2e-38
 Identities = 88/160 (55%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
 Frame = -3

Query: 472 MAVSMSMEPSIRGSGMEMLAKKKRGRPRKYSPDGSMALTLXXXXXXXXXXXSA---KXXX 302
           M  + S+  ++   G + + K+KRGRPRKY PDGSMAL L            +   K   
Sbjct: 1   MTANRSLAITMAMGGTDSM-KRKRGRPRKYGPDGSMALALAPLSASAPGAPFSPLQKRGR 59

Query: 301 XXXXXXXXRQLLASLGEWVLNSAGGNFTPHVVTINTGEDIAAKILSLSQKGPRAVCILSA 122
                   +Q LA+LGEWV+ SAG  FTPHV+TI  GED+A+KI+S SQ+GPRAVCILSA
Sbjct: 60  GRPPGSGKKQRLAALGEWVVGSAGIGFTPHVITIAAGEDVASKIMSFSQQGPRAVCILSA 119

Query: 121 NGAVSNVTIRQPGSSGGILTYEGRFEILALSGSFTLSDIG 2
           NGA+SNVT+RQP +SGG LTYEGRFEIL+LSGSF L++ G
Sbjct: 120 NGAISNVTLRQPATSGGTLTYEGRFEILSLSGSFMLTENG 159


>gb|ABR16059.1| unknown [Picea sitchensis]
          Length = 383

 Score =  161 bits (408), Expect = 8e-38
 Identities = 94/179 (52%), Positives = 116/179 (64%), Gaps = 1/179 (0%)
 Frame = -3

Query: 535 SPTQTETESPPMSGVAPQVMNMAVSMSMEPSIRGSGMEMLAKKKRGRPRKYSPDGSMALT 356
           S +   TESP  + + P  +NM V M++  +      E L K+KRGRPRKY PDGSMAL 
Sbjct: 64  SSSSYATESP--ATLVPHGVNMGVGMAVSVA----RTEPL-KRKRGRPRKYGPDGSMALA 116

Query: 355 LXXXXXXXXXXXSA-KXXXXXXXXXXXRQLLASLGEWVLNSAGGNFTPHVVTINTGEDIA 179
           L              K           +Q LA+LGEW+  SAG  FTPHV+TI  GED A
Sbjct: 117 LAPLSSVQGSLSPTQKRGRGRPPGSGRKQQLAALGEWLAGSAGMGFTPHVITIAAGEDAA 176

Query: 178 AKILSLSQKGPRAVCILSANGAVSNVTIRQPGSSGGILTYEGRFEILALSGSFTLSDIG 2
            KI+S SQ+GPRAVCILSANGA+S+VT+RQP +SGG +TYEGRFEIL+LSGSF L++ G
Sbjct: 177 TKIMSFSQQGPRAVCILSANGAISHVTLRQPATSGGTVTYEGRFEILSLSGSFLLTENG 235


>ref|XP_002320785.1| predicted protein [Populus trichocarpa] gi|222861558|gb|EEE99100.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  157 bits (398), Expect = 1e-36
 Identities = 88/166 (53%), Positives = 108/166 (65%), Gaps = 2/166 (1%)
 Frame = -3

Query: 493 VAPQVMNMAVSMSMEPSIRGSGMEMLAKKKRGRPRKYSPDG--SMALTLXXXXXXXXXXX 320
           ++P  +N+ V  +M PS          K+KRGRPRKY PDG  S+AL+            
Sbjct: 64  ISPHGVNVGVPSTMPPSGEP------VKRKRGRPRKYGPDGAVSLALSSSLSTHPGTITP 117

Query: 319 SAKXXXXXXXXXXXRQLLASLGEWVLNSAGGNFTPHVVTINTGEDIAAKILSLSQKGPRA 140
           S K           +Q LASLGEW+  SAG  FTPH++TI  GEDIA KI+S SQ+GPRA
Sbjct: 118 SQKRGRGRPPGTGRKQQLASLGEWLSGSAGMGFTPHIITIAVGEDIATKIMSFSQQGPRA 177

Query: 139 VCILSANGAVSNVTIRQPGSSGGILTYEGRFEILALSGSFTLSDIG 2
           VCILSANGAVS VT+RQP +SGG +TYEGRFEIL LSGS+ L++ G
Sbjct: 178 VCILSANGAVSTVTLRQPSTSGGTVTYEGRFEILCLSGSYLLTNDG 223


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