BLASTX nr result
ID: Coptis21_contig00023409
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023409 (265 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinu... 115 1e-26 ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797... 111 3e-26 ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791... 111 7e-26 ref|XP_002313993.1| predicted protein [Populus trichocarpa] gi|2... 113 7e-26 ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802... 111 2e-25 >ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis] gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis] Length = 1100 Score = 115 bits (289), Expect(2) = 1e-26 Identities = 57/68 (83%), Positives = 60/68 (88%) Frame = +2 Query: 62 VPQAITALKKGTHLLKYGRRGKPKIHHFRLANDESVLIWFSGKEEKWLKLSHVSRIIPGQ 241 + QAITALKKG +LLKYGRRGKPK FRL+NDESVLIWFSGKEEK LKLSHVSRII GQ Sbjct: 15 IEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQ 74 Query: 242 HTPIFQRY 265 TPIFQRY Sbjct: 75 RTPIFQRY 82 Score = 28.9 bits (63), Expect(2) = 1e-26 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +1 Query: 1 ADFNRTGPVERDIERVL 51 +D +RTGPVERDIE+ + Sbjct: 3 SDLSRTGPVERDIEQAI 19 >ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max] Length = 1099 Score = 111 bits (278), Expect(2) = 3e-26 Identities = 55/68 (80%), Positives = 60/68 (88%) Frame = +2 Query: 62 VPQAITALKKGTHLLKYGRRGKPKIHHFRLANDESVLIWFSGKEEKWLKLSHVSRIIPGQ 241 + QAITALKKG +LLKYGRRGKPK FRL+NDESVLIWFSGKEEK LKL++VSRII GQ Sbjct: 15 IEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLKLTNVSRIISGQ 74 Query: 242 HTPIFQRY 265 TPIFQRY Sbjct: 75 RTPIFQRY 82 Score = 32.0 bits (71), Expect(2) = 3e-26 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = +1 Query: 1 ADFNRTGPVERDIERVL 51 AD NRTGPVERDIE+ + Sbjct: 3 ADLNRTGPVERDIEQAI 19 >ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max] Length = 1106 Score = 111 bits (277), Expect(2) = 7e-26 Identities = 54/68 (79%), Positives = 60/68 (88%) Frame = +2 Query: 62 VPQAITALKKGTHLLKYGRRGKPKIHHFRLANDESVLIWFSGKEEKWLKLSHVSRIIPGQ 241 + QAITALKKG +LLKYGRRGKPK FRL+NDES+LIWFSGKEEK LKL++VSRII GQ Sbjct: 22 IEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFSGKEEKRLKLTNVSRIISGQ 81 Query: 242 HTPIFQRY 265 TPIFQRY Sbjct: 82 RTPIFQRY 89 Score = 30.8 bits (68), Expect(2) = 7e-26 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +1 Query: 1 ADFNRTGPVERDIERVL 51 +D NRTGPVERDIE+ + Sbjct: 10 SDLNRTGPVERDIEQAI 26 >ref|XP_002313993.1| predicted protein [Populus trichocarpa] gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa] Length = 1104 Score = 113 bits (283), Expect(2) = 7e-26 Identities = 55/68 (80%), Positives = 60/68 (88%) Frame = +2 Query: 62 VPQAITALKKGTHLLKYGRRGKPKIHHFRLANDESVLIWFSGKEEKWLKLSHVSRIIPGQ 241 + QAITALKKG +LLKYGRRGKPK FRL+NDESVLIWFSGKEEK L+LSHVS+II GQ Sbjct: 21 IEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLRLSHVSKIISGQ 80 Query: 242 HTPIFQRY 265 TPIFQRY Sbjct: 81 RTPIFQRY 88 Score = 28.5 bits (62), Expect(2) = 7e-26 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +1 Query: 1 ADFNRTGPVERDIERVL 51 +D RTGPVERDIE+ + Sbjct: 9 SDLGRTGPVERDIEQAI 25 >ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max] Length = 1106 Score = 111 bits (278), Expect(2) = 2e-25 Identities = 56/68 (82%), Positives = 58/68 (85%) Frame = +2 Query: 62 VPQAITALKKGTHLLKYGRRGKPKIHHFRLANDESVLIWFSGKEEKWLKLSHVSRIIPGQ 241 + QAITALKKG LLKYGRRG PK FRL+NDESVLIWFSGKEEK LKLSHVSRII GQ Sbjct: 20 IEQAITALKKGACLLKYGRRGTPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQ 79 Query: 242 HTPIFQRY 265 TPIFQRY Sbjct: 80 RTPIFQRY 87 Score = 28.9 bits (63), Expect(2) = 2e-25 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +1 Query: 1 ADFNRTGPVERDIERVL 51 +D +RTGPVERDIE+ + Sbjct: 8 SDLSRTGPVERDIEQAI 24