BLASTX nr result

ID: Coptis21_contig00023409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023409
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinu...   115   1e-26
ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797...   111   3e-26
ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791...   111   7e-26
ref|XP_002313993.1| predicted protein [Populus trichocarpa] gi|2...   113   7e-26
ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802...   111   2e-25

>ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223533605|gb|EEF35343.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 1100

 Score =  115 bits (289), Expect(2) = 1e-26
 Identities = 57/68 (83%), Positives = 60/68 (88%)
 Frame = +2

Query: 62  VPQAITALKKGTHLLKYGRRGKPKIHHFRLANDESVLIWFSGKEEKWLKLSHVSRIIPGQ 241
           + QAITALKKG +LLKYGRRGKPK   FRL+NDESVLIWFSGKEEK LKLSHVSRII GQ
Sbjct: 15  IEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQ 74

Query: 242 HTPIFQRY 265
            TPIFQRY
Sbjct: 75  RTPIFQRY 82



 Score = 28.9 bits (63), Expect(2) = 1e-26
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +1

Query: 1  ADFNRTGPVERDIERVL 51
          +D +RTGPVERDIE+ +
Sbjct: 3  SDLSRTGPVERDIEQAI 19


>ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  111 bits (278), Expect(2) = 3e-26
 Identities = 55/68 (80%), Positives = 60/68 (88%)
 Frame = +2

Query: 62  VPQAITALKKGTHLLKYGRRGKPKIHHFRLANDESVLIWFSGKEEKWLKLSHVSRIIPGQ 241
           + QAITALKKG +LLKYGRRGKPK   FRL+NDESVLIWFSGKEEK LKL++VSRII GQ
Sbjct: 15  IEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLKLTNVSRIISGQ 74

Query: 242 HTPIFQRY 265
            TPIFQRY
Sbjct: 75  RTPIFQRY 82



 Score = 32.0 bits (71), Expect(2) = 3e-26
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +1

Query: 1  ADFNRTGPVERDIERVL 51
          AD NRTGPVERDIE+ +
Sbjct: 3  ADLNRTGPVERDIEQAI 19


>ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  111 bits (277), Expect(2) = 7e-26
 Identities = 54/68 (79%), Positives = 60/68 (88%)
 Frame = +2

Query: 62  VPQAITALKKGTHLLKYGRRGKPKIHHFRLANDESVLIWFSGKEEKWLKLSHVSRIIPGQ 241
           + QAITALKKG +LLKYGRRGKPK   FRL+NDES+LIWFSGKEEK LKL++VSRII GQ
Sbjct: 22  IEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFSGKEEKRLKLTNVSRIISGQ 81

Query: 242 HTPIFQRY 265
            TPIFQRY
Sbjct: 82  RTPIFQRY 89



 Score = 30.8 bits (68), Expect(2) = 7e-26
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +1

Query: 1  ADFNRTGPVERDIERVL 51
          +D NRTGPVERDIE+ +
Sbjct: 10 SDLNRTGPVERDIEQAI 26


>ref|XP_002313993.1| predicted protein [Populus trichocarpa] gi|222850401|gb|EEE87948.1|
           predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  113 bits (283), Expect(2) = 7e-26
 Identities = 55/68 (80%), Positives = 60/68 (88%)
 Frame = +2

Query: 62  VPQAITALKKGTHLLKYGRRGKPKIHHFRLANDESVLIWFSGKEEKWLKLSHVSRIIPGQ 241
           + QAITALKKG +LLKYGRRGKPK   FRL+NDESVLIWFSGKEEK L+LSHVS+II GQ
Sbjct: 21  IEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLRLSHVSKIISGQ 80

Query: 242 HTPIFQRY 265
            TPIFQRY
Sbjct: 81  RTPIFQRY 88



 Score = 28.5 bits (62), Expect(2) = 7e-26
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 1  ADFNRTGPVERDIERVL 51
          +D  RTGPVERDIE+ +
Sbjct: 9  SDLGRTGPVERDIEQAI 25


>ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  111 bits (278), Expect(2) = 2e-25
 Identities = 56/68 (82%), Positives = 58/68 (85%)
 Frame = +2

Query: 62  VPQAITALKKGTHLLKYGRRGKPKIHHFRLANDESVLIWFSGKEEKWLKLSHVSRIIPGQ 241
           + QAITALKKG  LLKYGRRG PK   FRL+NDESVLIWFSGKEEK LKLSHVSRII GQ
Sbjct: 20  IEQAITALKKGACLLKYGRRGTPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQ 79

Query: 242 HTPIFQRY 265
            TPIFQRY
Sbjct: 80  RTPIFQRY 87



 Score = 28.9 bits (63), Expect(2) = 2e-25
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +1

Query: 1  ADFNRTGPVERDIERVL 51
          +D +RTGPVERDIE+ +
Sbjct: 8  SDLSRTGPVERDIEQAI 24


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