BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023363
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containi...   204   8e-51
ref|XP_002525469.1| pentatricopeptide repeat-containing protein,...   200   1e-49
ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containi...   197   6e-49
ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containi...   197   7e-49
ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48

>ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 516

 Score =  204 bits (518), Expect = 8e-51
 Identities = 93/116 (80%), Positives = 106/116 (91%)
 Frame = +2

Query: 2   GYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIMIRKYCAVHDV 181
           GY+HS+REYHSMISILGKMRKFDTAWNLI EMR G+ GPSLV+PQTLLIMIRKYCAVHDV
Sbjct: 91  GYAHSIREYHSMISILGKMRKFDTAWNLIEEMRRGRTGPSLVTPQTLLIMIRKYCAVHDV 150

Query: 182 GKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYPLNTKSF 349
            +AINTFYA+KQFNF++G+EEF  LLSALCRYKNV+ AEH LFCN+  +PL+TKSF
Sbjct: 151 ARAINTFYAYKQFNFQVGLEEFHSLLSALCRYKNVQDAEHLLFCNKNLFPLDTKSF 206


>ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535282|gb|EEF36959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score =  200 bits (508), Expect = 1e-49
 Identities = 93/116 (80%), Positives = 105/116 (90%)
 Frame = +2

Query: 2   GYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIMIRKYCAVHDV 181
           GYSHSVREYH+MISILGKMRKFDTAW LI+EMRG K G SLV+PQTLLIMIRKYCAVHDV
Sbjct: 156 GYSHSVREYHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTPQTLLIMIRKYCAVHDV 215

Query: 182 GKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYPLNTKSF 349
           G+AINTFYAHK+F F++GI+EFQ LLSALCRYKNV+ AEH +FCN+  +P NTKSF
Sbjct: 216 GRAINTFYAHKRFKFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSF 271


>ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 612

 Score =  197 bits (502), Expect = 6e-49
 Identities = 92/116 (79%), Positives = 105/116 (90%)
 Frame = +2

Query: 2   GYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIMIRKYCAVHDV 181
           GY+HSVREYHSMISILGKMRKFDTAWNLI EMRGG+ G SLV+PQTLLIMIRKYCAVHDV
Sbjct: 187 GYAHSVREYHSMISILGKMRKFDTAWNLIEEMRGGRNGLSLVTPQTLLIMIRKYCAVHDV 246

Query: 182 GKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYPLNTKSF 349
            +AINTFYA+K+FNF +G+EEF  LLSALCRYKNV+ AE+ LFCN+  +PL+TKSF
Sbjct: 247 ARAINTFYAYKRFNFRVGLEEFHSLLSALCRYKNVQDAEYLLFCNKDVFPLDTKSF 302


>ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
           gi|449477985|ref|XP_004155184.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
          Length = 485

 Score =  197 bits (501), Expect = 7e-49
 Identities = 93/116 (80%), Positives = 103/116 (88%)
 Frame = +2

Query: 2   GYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIMIRKYCAVHDV 181
           GY+HSVREYHSMISILGKMRKFDTAW LI+EMRGG  G SLV+PQTLLIMIR+YCAVHDV
Sbjct: 72  GYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMIRRYCAVHDV 131

Query: 182 GKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYPLNTKSF 349
            KAINTFYAHK+F F IG+EEFQ LLSALCRYKNV+ AE+ LFCN+  +P NTKSF
Sbjct: 132 AKAINTFYAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSF 187


>ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|222857515|gb|EEE95062.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  196 bits (497), Expect = 2e-48
 Identities = 92/116 (79%), Positives = 105/116 (90%)
 Frame = +2

Query: 2   GYSHSVREYHSMISILGKMRKFDTAWNLINEMRGGKVGPSLVSPQTLLIMIRKYCAVHDV 181
           GY+HSVREYHSMISILGKMRKFDTAW LI+EMRG K G SLV+PQTLLIMIRKYCAVHDV
Sbjct: 84  GYAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIMIRKYCAVHDV 143

Query: 182 GKAINTFYAHKQFNFEIGIEEFQDLLSALCRYKNVEAAEHFLFCNEKAYPLNTKSF 349
           G+AINTFYA+K+F F++GIEEFQ LLSALCRYKNV+ AE  ++CN+  +PLNTKSF
Sbjct: 144 GRAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSF 199