BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023360
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|2...   358   e-141
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   350   e-140
emb|CBI36559.3| unnamed protein product [Vitis vinifera]              350   e-140
ref|XP_002308414.1| predicted protein [Populus trichocarpa] gi|2...   353   e-138
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   350   e-138

>ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|222866553|gb|EEF03684.1|
           predicted protein [Populus trichocarpa]
          Length = 882

 Score =  358 bits (918), Expect(2) = e-141
 Identities = 164/195 (84%), Positives = 179/195 (91%)
 Frame = +1

Query: 301 KPLSDDGTEMQKWKWSMKKVSKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRG 480
           KP SDD TE+QKWKWS++K  K N+ERH+QRCD ELKLSVARK+KDEEGFYYPHNLDFRG
Sbjct: 405 KPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRG 464

Query: 481 RAYPMHPHLNHLSSDLCRGVLEFGEGRPLGEAGLRWLKIHLANLYAGGVEKLSYDRRLAF 660
           RAYPMHPHL HLSSDLCRGVLEF EGRPLG++GLRWLKIHLANLY+GGVEKLS+D RLAF
Sbjct: 465 RAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAF 524

Query: 661 TENHLTDIVDSADKPIDGKRWWLNAEDPFQCLAACINLSEALKSSSPHNVISHLPIHQDG 840
            ENHL++I DSA  P++GKRWWL AEDPFQCLAACINLSEAL S+SPH VISHLPIHQDG
Sbjct: 525 VENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIHQDG 584

Query: 841 SCNGLQHYAALGRDT 885
           SCNGLQHYAALGRDT
Sbjct: 585 SCNGLQHYAALGRDT 599



 Score =  172 bits (435), Expect(2) = e-141
 Identities = 76/98 (77%), Positives = 90/98 (91%)
 Frame = +2

Query: 5   TARHMVIPYVPMLIPPRKWKGYERGGHLFLPSYVMRTHGARQQQDAMKSVPRKQMEKVFE 184
           TA+HM+IPY PML+PP+KWKGY++GGHLFLPSYVMRTHG+RQQQ A++SVP KQM+KVFE
Sbjct: 302 TAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVFE 361

Query: 185 ALDTLGQTKWRVNKRVLAAVESLWESGGNVAGLVDRED 298
           ALDTLG TKWRVN+R+L  VE +W SGGN+AGLVDRED
Sbjct: 362 ALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDRED 399


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score =  350 bits (898), Expect(2) = e-140
 Identities = 159/195 (81%), Positives = 176/195 (90%)
 Frame = +1

Query: 301  KPLSDDGTEMQKWKWSMKKVSKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRG 480
            KP ++D TE+Q WKW+ +K  K N+ERH+ RCD E+KLSVARKMKDEEGFYYPHNLDFRG
Sbjct: 502  KPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRG 561

Query: 481  RAYPMHPHLNHLSSDLCRGVLEFGEGRPLGEAGLRWLKIHLANLYAGGVEKLSYDRRLAF 660
            RAYPMHPHLNHLSSDLCRGVLEF EGRPLG++GLRWLKI LANLYAGGVEKLSYD RLAF
Sbjct: 562  RAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAF 621

Query: 661  TENHLTDIVDSADKPIDGKRWWLNAEDPFQCLAACINLSEALKSSSPHNVISHLPIHQDG 840
             +NHL D+ DSAD P++G RWWL AEDPFQCLAACINLSEAL+SSSPH VISHLPIHQDG
Sbjct: 622  VDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDG 681

Query: 841  SCNGLQHYAALGRDT 885
            SCNGLQHYAALGR++
Sbjct: 682  SCNGLQHYAALGRNS 696



 Score =  176 bits (446), Expect(2) = e-140
 Identities = 77/99 (77%), Positives = 94/99 (94%)
 Frame = +2

Query: 2   RTARHMVIPYVPMLIPPRKWKGYERGGHLFLPSYVMRTHGARQQQDAMKSVPRKQMEKVF 181
           RTA+HMVIPYVPMLIPP+KWKGY++GG+LFLPSYVMRTHG+R+QQDA+KSVPR+Q++KVF
Sbjct: 398 RTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVF 457

Query: 182 EALDTLGQTKWRVNKRVLAAVESLWESGGNVAGLVDRED 298
           EALDTLG TKWR+N+RVL+ VES+W  GGN+ GLVDRE+
Sbjct: 458 EALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVDREN 496


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  350 bits (898), Expect(2) = e-140
 Identities = 159/195 (81%), Positives = 176/195 (90%)
 Frame = +1

Query: 301 KPLSDDGTEMQKWKWSMKKVSKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRG 480
           KP ++D TE+Q WKW+ +K  K N+ERH+ RCD E+KLSVARKMKDEEGFYYPHNLDFRG
Sbjct: 331 KPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRG 390

Query: 481 RAYPMHPHLNHLSSDLCRGVLEFGEGRPLGEAGLRWLKIHLANLYAGGVEKLSYDRRLAF 660
           RAYPMHPHLNHLSSDLCRGVLEF EGRPLG++GLRWLKI LANLYAGGVEKLSYD RLAF
Sbjct: 391 RAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAF 450

Query: 661 TENHLTDIVDSADKPIDGKRWWLNAEDPFQCLAACINLSEALKSSSPHNVISHLPIHQDG 840
            +NHL D+ DSAD P++G RWWL AEDPFQCLAACINLSEAL+SSSPH VISHLPIHQDG
Sbjct: 451 VDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDG 510

Query: 841 SCNGLQHYAALGRDT 885
           SCNGLQHYAALGR++
Sbjct: 511 SCNGLQHYAALGRNS 525



 Score =  176 bits (446), Expect(2) = e-140
 Identities = 77/99 (77%), Positives = 94/99 (94%)
 Frame = +2

Query: 2   RTARHMVIPYVPMLIPPRKWKGYERGGHLFLPSYVMRTHGARQQQDAMKSVPRKQMEKVF 181
           RTA+HMVIPYVPMLIPP+KWKGY++GG+LFLPSYVMRTHG+R+QQDA+KSVPR+Q++KVF
Sbjct: 227 RTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVF 286

Query: 182 EALDTLGQTKWRVNKRVLAAVESLWESGGNVAGLVDRED 298
           EALDTLG TKWR+N+RVL+ VES+W  GGN+ GLVDRE+
Sbjct: 287 EALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVDREN 325


>ref|XP_002308414.1| predicted protein [Populus trichocarpa] gi|222854390|gb|EEE91937.1|
            predicted protein [Populus trichocarpa]
          Length = 982

 Score =  353 bits (906), Expect(2) = e-138
 Identities = 161/192 (83%), Positives = 178/192 (92%)
 Frame = +1

Query: 310  SDDGTEMQKWKWSMKKVSKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAY 489
            SDD TE+QKWKWS++K  K N+ERH+QRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAY
Sbjct: 508  SDDLTEIQKWKWSVRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAY 567

Query: 490  PMHPHLNHLSSDLCRGVLEFGEGRPLGEAGLRWLKIHLANLYAGGVEKLSYDRRLAFTEN 669
            PMHPHL HLSSDLCRGVLEF EGRPLG++GL WLKIHLANLY+GGVEKLS+D RLAF EN
Sbjct: 568  PMHPHLTHLSSDLCRGVLEFAEGRPLGKSGLCWLKIHLANLYSGGVEKLSHDGRLAFVEN 627

Query: 670  HLTDIVDSADKPIDGKRWWLNAEDPFQCLAACINLSEALKSSSPHNVISHLPIHQDGSCN 849
            HL++I DSA+ P++GKRWWL AEDPFQCLAACINLSEALKS+SPH VISHLPIHQDGSCN
Sbjct: 628  HLSEIFDSAENPVNGKRWWLTAEDPFQCLAACINLSEALKSASPHTVISHLPIHQDGSCN 687

Query: 850  GLQHYAALGRDT 885
            GLQHYAALGRD+
Sbjct: 688  GLQHYAALGRDS 699



 Score =  165 bits (418), Expect(2) = e-138
 Identities = 73/98 (74%), Positives = 88/98 (89%)
 Frame = +2

Query: 5   TARHMVIPYVPMLIPPRKWKGYERGGHLFLPSYVMRTHGARQQQDAMKSVPRKQMEKVFE 184
           TA+HM+IPY PML+PP+KW+GY++GGHLFLPSY+MRTHG+RQQQDA++SVP KQM+KVFE
Sbjct: 402 TAKHMLIPYFPMLVPPKKWRGYDKGGHLFLPSYIMRTHGSRQQQDAVRSVPGKQMQKVFE 461

Query: 185 ALDTLGQTKWRVNKRVLAAVESLWESGGNVAGLVDRED 298
           ALDTLG TKWRVN +VL  VE +W SGGN AGLV+R D
Sbjct: 462 ALDTLGNTKWRVNGKVLDVVERIWASGGNNAGLVNRGD 499


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score =  350 bits (899), Expect(2) = e-138
 Identities = 162/195 (83%), Positives = 177/195 (90%)
 Frame = +1

Query: 301  KPLSDDGTEMQKWKWSMKKVSKCNRERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRG 480
            KPL D  TEMQ+W+WSMKK  K N+E H+QRCD+ELKLSVARKMKDEEGFYYPHNLDFRG
Sbjct: 499  KPLGDL-TEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNLDFRG 557

Query: 481  RAYPMHPHLNHLSSDLCRGVLEFGEGRPLGEAGLRWLKIHLANLYAGGVEKLSYDRRLAF 660
            RAYPMHPHLNHLSSDLCRGVLEF EGRPLG++GL WLKIHLANLYAGGVEKLSYD RLAF
Sbjct: 558  RAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAF 617

Query: 661  TENHLTDIVDSADKPIDGKRWWLNAEDPFQCLAACINLSEALKSSSPHNVISHLPIHQDG 840
             ++HL +I DSA  P++G RWWL AEDPFQCLAAC+NLSEALKSS+PH VIS+LPIHQDG
Sbjct: 618  VDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDG 677

Query: 841  SCNGLQHYAALGRDT 885
            SCNGLQHYAALGRDT
Sbjct: 678  SCNGLQHYAALGRDT 692



 Score =  167 bits (424), Expect(2) = e-138
 Identities = 73/99 (73%), Positives = 88/99 (88%)
 Frame = +2

Query: 2   RTARHMVIPYVPMLIPPRKWKGYERGGHLFLPSYVMRTHGARQQQDAMKSVPRKQMEKVF 181
           RTA+HM+IPY+PML+PP+KWKGY++GGH FLPSYVMRTHG+ +QQDAMK++  KQM+KVF
Sbjct: 395 RTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVF 454

Query: 182 EALDTLGQTKWRVNKRVLAAVESLWESGGNVAGLVDRED 298
           EALD LG TKWRVN+ VL+ VESLW  GGN AGLVDR+D
Sbjct: 455 EALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKD 493