BLASTX nr result

ID: Coptis21_contig00023357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023357
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169404.1| PREDICTED: uncharacterized protein LOC101226...   138   7e-31
gb|ADN34075.1| DNA binding protein [Cucumis melo subsp. melo]         136   2e-30
ref|XP_002316272.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_003552872.1| PREDICTED: uncharacterized protein LOC100806...   126   3e-27
ref|XP_003538417.1| PREDICTED: uncharacterized protein LOC100817...   125   5e-27

>ref|XP_004169404.1| PREDICTED: uncharacterized protein LOC101226173 [Cucumis sativus]
          Length = 752

 Score =  138 bits (347), Expect = 7e-31
 Identities = 62/114 (54%), Positives = 84/114 (73%)
 Frame = +3

Query: 108 VNSGPKPIAVSPFKKDAAWGHCQMYKTGDRTQLKCLYCYKVFCGGGIHRIKEHLACHKGN 287
           ++SG +P+ ++P K D AW HCQM+K GDR QLKCLYC+K+F GGGIHRIKEHLA  KGN
Sbjct: 1   MSSGLQPVPITPQKHDPAWKHCQMFKNGDRVQLKCLYCHKLFKGGGIHRIKEHLAGQKGN 60

Query: 288 ASCCTKVPDDVRDAMLESLQCVIMKRKKRQKIDEDIRGFTPSSNEIDNRSRFVE 449
           AS C  VP +V++ M ESL  V+MK++KRQK+DE++      + E+D  S  ++
Sbjct: 61  ASTCHSVPPEVQNIMQESLDGVMMKKRKRQKLDEEMTNVNTMTGEVDGISNHMD 114


>gb|ADN34075.1| DNA binding protein [Cucumis melo subsp. melo]
          Length = 752

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/114 (54%), Positives = 84/114 (73%)
 Frame = +3

Query: 108 VNSGPKPIAVSPFKKDAAWGHCQMYKTGDRTQLKCLYCYKVFCGGGIHRIKEHLACHKGN 287
           ++SG +P+ ++P K D AW HCQM+K GDR QLKCLYC+K+F GGGIHRIKEHLA  KGN
Sbjct: 1   MSSGLQPVPITPQKHDPAWKHCQMFKNGDRVQLKCLYCHKLFKGGGIHRIKEHLAGQKGN 60

Query: 288 ASCCTKVPDDVRDAMLESLQCVIMKRKKRQKIDEDIRGFTPSSNEIDNRSRFVE 449
           AS C  VP +V++ M ESL  V+MK++KRQK+DE++      + E+D  S  ++
Sbjct: 61  ASTCHSVPPEVQNIMQESLDGVMMKKRKRQKLDEEMTNVNAMTAEVDAISNHMD 114


>ref|XP_002316272.1| predicted protein [Populus trichocarpa] gi|222865312|gb|EEF02443.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  127 bits (320), Expect = 9e-28
 Identities = 59/106 (55%), Positives = 77/106 (72%)
 Frame = +3

Query: 108 VNSGPKPIAVSPFKKDAAWGHCQMYKTGDRTQLKCLYCYKVFCGGGIHRIKEHLACHKGN 287
           + S  +PI ++  K D AW HCQM+K G+R QLKC+YC K+F GGGIHRIKEHLA  KGN
Sbjct: 1   MGSNLEPIPITSQKHDPAWKHCQMFKNGERVQLKCVYCGKIFKGGGIHRIKEHLAGQKGN 60

Query: 288 ASCCTKVPDDVRDAMLESLQCVIMKRKKRQKIDEDIRGFTPSSNEI 425
           A+ C +VP DVR  M +SL  V++K++K+QKI E+I    P S+EI
Sbjct: 61  AATCVQVPSDVRLMMQQSLDGVVVKKRKKQKIAEEITNLNPVSSEI 106


>ref|XP_003552872.1| PREDICTED: uncharacterized protein LOC100806265 [Glycine max]
          Length = 758

 Score =  126 bits (316), Expect = 3e-27
 Identities = 57/117 (48%), Positives = 83/117 (70%), Gaps = 3/117 (2%)
 Frame = +3

Query: 108 VNSGPKPIAVSPFKKDAAWGHCQMYKTGDRTQLKCLYCYKVFCGGGIHRIKEHLACHKGN 287
           + S  +P+ ++  K D AW H QM+K GD+ QLKC+YC K+F GGGIHRIKEHLAC KGN
Sbjct: 1   MGSNLEPVPITSQKHDPAWKHVQMFKNGDKVQLKCIYCLKMFKGGGIHRIKEHLACQKGN 60

Query: 288 ASCCTKVPDDVRDAMLESLQCVIMKRKKRQKIDEDIRGFTPSS---NEIDNRSRFVE 449
           AS C++VP DVR  M +SL  V++K++++Q+I+E+I    P +   N + N ++ V+
Sbjct: 61  ASTCSRVPHDVRLHMQQSLDGVVVKKRRKQRIEEEIMSVNPLTTVVNSLPNNNQVVD 117


>ref|XP_003538417.1| PREDICTED: uncharacterized protein LOC100817502 [Glycine max]
          Length = 759

 Score =  125 bits (314), Expect = 5e-27
 Identities = 57/118 (48%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
 Frame = +3

Query: 108 VNSGPKPIAVSPFKKDAAWGHCQMYKTGDRTQLKCLYCYKVFCGGGIHRIKEHLACHKGN 287
           + S  +P+ ++  K D AW H QM+K GD+ QLKC+YC K+F GGGIHRIKEHLAC KGN
Sbjct: 1   MGSNLEPVPITSQKHDPAWKHVQMFKNGDKVQLKCIYCLKMFKGGGIHRIKEHLACQKGN 60

Query: 288 ASCCTKVPDDVRDAMLESLQCVIMKRKKRQKIDEDIRGFTPSSNEI----DNRSRFVE 449
           AS C++VP DVR  M +SL  V++K++++Q+I+E+I    P +  +    +N +R V+
Sbjct: 61  ASTCSRVPHDVRLHMQQSLDGVVVKKRRKQRIEEEIMSVNPLTTVVNSLPNNNNRVVD 118


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