BLASTX nr result

ID: Coptis21_contig00023339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023339
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321625.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002275628.1| PREDICTED: galactinol--sucrose galactosyltra...   112   2e-23
emb|CAN60422.1| hypothetical protein VITISV_021070 [Vitis vinifera]   112   2e-23
ref|XP_002327943.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002524657.1| Stachyose synthase precursor, putative [Rici...   110   1e-22

>ref|XP_002321625.1| predicted protein [Populus trichocarpa] gi|222868621|gb|EEF05752.1|
           predicted protein [Populus trichocarpa]
          Length = 765

 Score =  114 bits (286), Expect = 6e-24
 Identities = 49/85 (57%), Positives = 67/85 (78%)
 Frame = +3

Query: 114 KPYLITLEKSDLMVNGNLILSEVPSNIVLSPSSYESTEQPLSINGCFLGFDSDDSKSRHV 293
           +P  ITLE  + + NG+ +L+EVP+NI+ +PS + S+ +  ++ GCF+GFD+ + KS HV
Sbjct: 8   QPLSITLEGKNFLANGHPVLTEVPTNIIATPSPFLSSNKTKNLVGCFVGFDAHEPKSHHV 67

Query: 294 VPLGKLKGIRFMSIFRFKVWWTTHW 368
           VP+GKL GIRFMSIFRFKVWWTTHW
Sbjct: 68  VPIGKLSGIRFMSIFRFKVWWTTHW 92


>ref|XP_002275628.1| PREDICTED: galactinol--sucrose galactosyltransferase [Vitis
           vinifera] gi|296087624|emb|CBI34880.3| unnamed protein
           product [Vitis vinifera]
          Length = 775

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/85 (61%), Positives = 66/85 (77%)
 Frame = +3

Query: 114 KPYLITLEKSDLMVNGNLILSEVPSNIVLSPSSYESTEQPLSINGCFLGFDSDDSKSRHV 293
           K  LI L+ SD + NG+ +LS+VP N+V +PS       P++ +GCF+GFD+D+ KSRHV
Sbjct: 20  KQPLIALQGSDFVANGHRVLSDVPPNVVATPS-------PVTPDGCFVGFDADEGKSRHV 72

Query: 294 VPLGKLKGIRFMSIFRFKVWWTTHW 368
           V +GKLKGIRFMSIFRFKVWWTTHW
Sbjct: 73  VSVGKLKGIRFMSIFRFKVWWTTHW 97


>emb|CAN60422.1| hypothetical protein VITISV_021070 [Vitis vinifera]
          Length = 762

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/85 (61%), Positives = 66/85 (77%)
 Frame = +3

Query: 114 KPYLITLEKSDLMVNGNLILSEVPSNIVLSPSSYESTEQPLSINGCFLGFDSDDSKSRHV 293
           K  LI L+ SD + NG+ +LS+VP N+V +PS       P++ +GCF+GFD+D+ KSRHV
Sbjct: 20  KQPLIALQGSDFVANGHRVLSDVPPNVVATPS-------PVTPDGCFVGFDADEGKSRHV 72

Query: 294 VPLGKLKGIRFMSIFRFKVWWTTHW 368
           V +GKLKGIRFMSIFRFKVWWTTHW
Sbjct: 73  VSVGKLKGIRFMSIFRFKVWWTTHW 97


>ref|XP_002327943.1| predicted protein [Populus trichocarpa] gi|222837352|gb|EEE75731.1|
           predicted protein [Populus trichocarpa]
          Length = 783

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/87 (62%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
 Frame = +3

Query: 111 SKPYLITLEKSDLMVNGNLILSEVPSNIVLSPSSYESTEQPLSIN-GCFLGFDSDDSKSR 287
           + P LI+LE S+ +VNG++ LS+VP NI LSPS    TE+ +  N G F+GFDS +SK R
Sbjct: 19  NNPSLISLEGSNFVVNGHIFLSDVPDNITLSPSPATLTEKTICDNAGSFVGFDSKESKDR 78

Query: 288 HVVPLGKLKGIRFMSIFRFKVWWTTHW 368
           HVV +GKLK I+FMSIFRFKVWWTTHW
Sbjct: 79  HVVHIGKLKSIKFMSIFRFKVWWTTHW 105


>ref|XP_002524657.1| Stachyose synthase precursor, putative [Ricinus communis]
           gi|223536018|gb|EEF37676.1| Stachyose synthase
           precursor, putative [Ricinus communis]
          Length = 787

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/87 (57%), Positives = 66/87 (75%)
 Frame = +3

Query: 108 NSKPYLITLEKSDLMVNGNLILSEVPSNIVLSPSSYESTEQPLSINGCFLGFDSDDSKSR 287
           +S  ++I+LE S+L  NG++ LS VP NI L+PS Y  T++  +  G F+GFDS +SK R
Sbjct: 24  HSNQFVISLEDSNLKANGHVFLSCVPDNITLTPSRYALTDKSSTTVGSFIGFDSMESKDR 83

Query: 288 HVVPLGKLKGIRFMSIFRFKVWWTTHW 368
           HV+ +GKLK I+FMSIFRFKVWWTTHW
Sbjct: 84  HVISIGKLKNIKFMSIFRFKVWWTTHW 110


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