BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023311
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   155   3e-45
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...   129   1e-42
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   151   3e-42
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...   151   3e-42
emb|CAN79190.1| hypothetical protein VITISV_000232 [Vitis vinifera]   134   4e-40

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  155 bits (392), Expect(2) = 3e-45
 Identities = 90/256 (35%), Positives = 139/256 (54%), Gaps = 1/256 (0%)
 Frame = -1

Query: 771  LCSEEKIAREELRNFIEMEYMDLKQRADNDWLDYSDKGNAFFHHAIREKKNRNIIWSVHD 592
            L  EEK    +LR +  ++   LKQ++   WL   D  + FF  AI+ +K RN I  + +
Sbjct: 325  LQEEEKDLIAQLRKWSTIDESILKQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQN 384

Query: 591  QNGTKKEGQVEVADTFIKYYKDLIGSSSPITCQEELLD-EIPMCSVVDNLITAAKLIEEV 415
              G +     E+ +    +Y+ L+G+SS    Q E +D  +       +  + A+L++ +
Sbjct: 385  DRGDQLTENTEIQNEICNFYRRLLGTSSS---QLEAIDLHVVRVGAKLSATSCAQLVQPI 441

Query: 414  TESEIKEALFPMEDSKAPGPDGYNAFFFKTTGNTVGGDFIRAIKSVFAFNKIYKGTNSTF 235
            T  EI +AL  ++D+KAPG DG+N+ FFK +   +  +    I   F    ++K  N T 
Sbjct: 442  TIQEIDQALADIDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTA 501

Query: 234  LCLIPKKPVVSRVDEYRPIACCNVTYKCIAKILSNRLKPHIAQWISMNQSTFIPRRSIQD 55
            + LIPK        +YRPIACC+  YK I+KIL+ RL+  I + +   Q+ FIP R I D
Sbjct: 502  VTLIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGD 561

Query: 54   NLLLAHEILRGYTRTH 7
            N+LLA E++RGY R H
Sbjct: 562  NILLATELIRGYNRRH 577



 Score = 54.3 bits (129), Expect(2) = 3e-45
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
 Frame = -3

Query: 1225 LYDLRASGCFFTWTNYADGPNRKWSKIDRILVNTSCSILFSNSSAEFLTQSISDHFPMLI 1046
            L +   +G F++W N + G +R  S+ID+  VN +    + +   E+    ISDH P++ 
Sbjct: 173  LLEAPTTGLFYSWNNKSIGADRISSRIDKSFVNVAWINQYPDVVVEYREAGISDHSPLIF 232

Query: 1045 HL-LDHERGCYPFRFSNYWSLHKDFKAXXXXXXXXXXVGCPLFVLVYKLKILKSKLRGWA 869
            +L   H+ G  PF+F N+ +    F                +  +  +L+ +K  L+ + 
Sbjct: 233  NLATQHDEGGRPFKFLNFLADQNGFVEVVKEAWGSANHRFKMKNIWVRLQAVKRALKSFH 292

Query: 868  RAYLSDIHIRTEASRENLVRIK 803
                S  H + E  R  L  ++
Sbjct: 293  SKKFSKAHCQVEELRRKLAAVQ 314


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  129 bits (323), Expect(2) = 1e-42
 Identities = 70/211 (33%), Positives = 119/211 (56%), Gaps = 3/211 (1%)
 Frame = -1

Query: 789 APQNPLLCSEEKIAREELRNFIEMEYMDLKQRADNDWLDYSDKGNAFFHHAIREKKNRNI 610
           A +NP+LC  E+    +  + +  E    KQ+A   WL   D+  ++FH ++  + NRN 
Sbjct: 291 AHENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRHNRNK 350

Query: 609 IWSVHDQNGTKKEGQVEVADTFIKYYKDLIGSSSPITCQEELLDEIPMCSVVDNLITAAK 430
           + S+  ++G   EG   V    I Y+  ++G    +     +L+E  M S ++  +++ +
Sbjct: 351 LLSLTREDGEVVEGHEAVKSEVIAYFHRVLG----VDQMPRVLNEEVMESAINLKLSSTQ 406

Query: 429 ---LIEEVTESEIKEALFPMEDSKAPGPDGYNAFFFKTTGNTVGGDFIRAIKSVFAFNKI 259
              L + VT  EIK A+F ++++KAPG DG+NA FFK   + VG D I A++S+F   ++
Sbjct: 407 QHVLAQVVTRKEIKHAMFSLKNNKAPGLDGFNAGFFKRMWHIVGEDVINAVRSLFQTRRM 466

Query: 258 YKGTNSTFLCLIPKKPVVSRVDEYRPIACCN 166
            K  N+T + LIPK    +R+ ++RPI+CCN
Sbjct: 467 LKEMNATSISLIPKVANPTRLTDFRPISCCN 497



 Score = 72.0 bits (175), Expect(2) = 1e-42
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
 Frame = -3

Query: 1219 DLRASGCFFTWTNYADGPNRKWSKIDRILVNTSCSILFSNSSAEFLTQSISDHFPMLIHL 1040
            DLR SG  +TW+N     N    K+DR+LVN   ++ F  S   FL   ISDH PM++ +
Sbjct: 160  DLRYSGMHYTWSNQCP-ENLIMRKLDRVLVNEKWNLNFPLSEVRFLPSGISDHSPMVVKV 218

Query: 1039 LDHERGC-YPFRFSNYWSLHKDFKAXXXXXXXXXXVGCPLFVLVYKLKILKSKLRGWARA 863
            + +++    PFRF + W                   GCP++ L   LK LK +L+ +  A
Sbjct: 219  IGNDQNIKKPFRFFDMW-------------MDQNSGGCPMYQLCCNLKKLKQELKLFNMA 265

Query: 862  YLSDIHIRTEASRENLVRIKKELQRSTE 779
            + S+I  R + ++  + + ++ L  + E
Sbjct: 266  HFSNISDRVKDAKNEMDKAQQALHTAHE 293


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score =  151 bits (382), Expect(2) = 3e-42
 Identities = 93/264 (35%), Positives = 145/264 (54%), Gaps = 3/264 (1%)
 Frame = -1

Query: 789  APQNPLLCSEEKIAREELRNFIEMEYMDLKQRADNDWLDYSDKGNAFFHHAIREKKNRNI 610
            +P N ++  EEK+  ++L    E E +  +QR+  DWL   D+  AFFH     ++  N 
Sbjct: 324  SPVNDVVIQEEKLIEQQLCELFEKEEIMARQRSRVDWLREGDRNTAFFHARASARRRTNR 383

Query: 609  IWSVHDQNGTK---KEGQVEVADTFIKYYKDLIGSSSPITCQEELLDEIPMCSVVDNLIT 439
            I  +   +G++   +EG   +A+ F   Y++L  SS P    EE+LD IP  + V + I 
Sbjct: 384  IKELVRDDGSRCISQEGIKRMAEVF---YENLF-SSEPCDSMEEVLDAIP--NKVGDFIN 437

Query: 438  AAKLIEEVTESEIKEALFPMEDSKAPGPDGYNAFFFKTTGNTVGGDFIRAIKSVFAFNKI 259
              +L ++ T  EIK ALF M  +KAPGPDG+ A F++T    +      A++      +I
Sbjct: 438  G-ELGKQYTNEEIKTALFQMGSTKAPGPDGFPALFYQTHWGILEEHICNAVRGFLLGEEI 496

Query: 258  YKGTNSTFLCLIPKKPVVSRVDEYRPIACCNVTYKCIAKILSNRLKPHIAQWISMNQSTF 79
             +G   + + LIPK    S + ++RPI+ CNV YK  +K+L+NRLKP +   +S  QS F
Sbjct: 497  PEGLCDSVVVLIPKVNNASHLSKFRPISLCNVLYKIASKVLANRLKPFLPDIVSEFQSAF 556

Query: 78   IPRRSIQDNLLLAHEILRGYTRTH 7
            +P R I D+ L+A+E L    + H
Sbjct: 557  VPGRLITDSALVAYECLHTIRKQH 580



 Score = 48.1 bits (113), Expect(2) = 3e-42
 Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 7/163 (4%)
 Frame = -3

Query: 1234 DTGLYDLRASGCFFTWTNYADGPNRKWSKIDRILVNTSCSILFSNSSAEFLTQSISDHFP 1055
            D GL DL   G  FTW+N  D  +    ++DR + N   S  F +   E +  + SDH+ 
Sbjct: 172  DCGLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCLVENVITTSSDHYA 231

Query: 1054 MLIHLLDHERG------CYPFRFSNYWSLHKDFKAXXXXXXXXXXVGCPLFVLVYK-LKI 896
            + I L     G         FRF   W   +D++            GC     V+  L+ 
Sbjct: 232  ISIDLSRRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENSWRISSAGCVGLRGVWSVLQQ 291

Query: 895  LKSKLRGWARAYLSDIHIRTEASRENLVRIKKELQRSTEPSPM 767
            +   L+ W++A    +       R  +++++++L +S   SP+
Sbjct: 292  VAVSLKDWSKASFGSV-------RRKILKMERKL-KSLRQSPV 326


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score =  151 bits (382), Expect(2) = 3e-42
 Identities = 93/264 (35%), Positives = 145/264 (54%), Gaps = 3/264 (1%)
 Frame = -1

Query: 789  APQNPLLCSEEKIAREELRNFIEMEYMDLKQRADNDWLDYSDKGNAFFHHAIREKKNRNI 610
            +P N ++  EEK+  ++L    E E +  +QR+  DWL   D+  AFFH     ++  N 
Sbjct: 281  SPVNDVVIQEEKLIEQQLCELFEKEEIMARQRSRVDWLREGDRNTAFFHARASARRRTNR 340

Query: 609  IWSVHDQNGTK---KEGQVEVADTFIKYYKDLIGSSSPITCQEELLDEIPMCSVVDNLIT 439
            I  +   +G++   +EG   +A+ F   Y++L  SS P    EE+LD IP  + V + I 
Sbjct: 341  IKELVRDDGSRCISQEGIKRMAEVF---YENLF-SSEPCDSMEEVLDAIP--NKVGDFIN 394

Query: 438  AAKLIEEVTESEIKEALFPMEDSKAPGPDGYNAFFFKTTGNTVGGDFIRAIKSVFAFNKI 259
              +L ++ T  EIK ALF M  +KAPGPDG+ A F++T    +      A++      +I
Sbjct: 395  G-ELGKQYTNEEIKTALFQMGSTKAPGPDGFPALFYQTHWGILEEHICNAVRGFLLGEEI 453

Query: 258  YKGTNSTFLCLIPKKPVVSRVDEYRPIACCNVTYKCIAKILSNRLKPHIAQWISMNQSTF 79
             +G   + + LIPK    S + ++RPI+ CNV YK  +K+L+NRLKP +   +S  QS F
Sbjct: 454  PEGLCDSVVVLIPKVNNASHLSKFRPISLCNVLYKIASKVLANRLKPFLPDIVSEFQSAF 513

Query: 78   IPRRSIQDNLLLAHEILRGYTRTH 7
            +P R I D+ L+A+E L    + H
Sbjct: 514  VPGRLITDSALVAYECLHTIRKQH 537



 Score = 48.1 bits (113), Expect(2) = 3e-42
 Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 7/163 (4%)
 Frame = -3

Query: 1234 DTGLYDLRASGCFFTWTNYADGPNRKWSKIDRILVNTSCSILFSNSSAEFLTQSISDHFP 1055
            D GL DL   G  FTW+N  D  +    ++DR + N   S  F +   E +  + SDH+ 
Sbjct: 129  DCGLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCLVENVITTSSDHYA 188

Query: 1054 MLIHLLDHERG------CYPFRFSNYWSLHKDFKAXXXXXXXXXXVGCPLFVLVYK-LKI 896
            + I L     G         FRF   W   +D++            GC     V+  L+ 
Sbjct: 189  ISIDLSRRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENSWRISSAGCVGLRGVWSVLQQ 248

Query: 895  LKSKLRGWARAYLSDIHIRTEASRENLVRIKKELQRSTEPSPM 767
            +   L+ W++A    +       R  +++++++L +S   SP+
Sbjct: 249  VAVSLKDWSKASFGSV-------RRKILKMERKL-KSLRQSPV 283


>emb|CAN79190.1| hypothetical protein VITISV_000232 [Vitis vinifera]
          Length = 1935

 Score =  134 bits (336), Expect(2) = 4e-40
 Identities = 75/251 (29%), Positives = 130/251 (51%)
 Frame = -1

Query: 780  NPLLCSEEKIAREELRNFIEMEYMDLKQRADNDWLDYSDKGNAFFHHAIREKKNRNIIWS 601
            +P L  +  + + EL   I  E +  +Q+A   W+   D  + FFH     ++NR  I  
Sbjct: 1047 SPELLIQRAVRKGELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKV 1106

Query: 600  VHDQNGTKKEGQVEVADTFIKYYKDLIGSSSPITCQEELLDEIPMCSVVDNLITAAKLIE 421
            + ++ G   +    + +  ++Y++ L  S S  + + E LD  P+ S      +A++L  
Sbjct: 1107 LENERGLVLDNSDSIKEEILRYFEKLYASPSGESWRVEGLDWSPISSE-----SASRLES 1161

Query: 420  EVTESEIKEALFPMEDSKAPGPDGYNAFFFKTTGNTVGGDFIRAIKSVFAFNKIYKGTNS 241
              TE EI +A+F M+  KAPGPDG+    F+   + +  D +R          I + TN+
Sbjct: 1162 PFTEEEISKAIFQMDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFDEFHRSGIINQSTNA 1221

Query: 240  TFLCLIPKKPVVSRVDEYRPIACCNVTYKCIAKILSNRLKPHIAQWISMNQSTFIPRRSI 61
            +F+ L+PKK +  ++ +YRPI+     YK IAK+L+ RL+  + + I   Q  F+  R I
Sbjct: 1222 SFIVLLPKKSMAKKLSDYRPISLITSLYKIIAKVLAGRLRGVLHETIHSTQGAFVQGRQI 1281

Query: 60   QDNLLLAHEIL 28
             D +L+A+EI+
Sbjct: 1282 LDAVLIANEIV 1292



 Score = 58.5 bits (140), Expect(2) = 4e-40
 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = -3

Query: 1195 FTWTNYADGPNRKWSKIDRILVNTSCSILFSNSSAEFLTQSISDHFPMLIHLLDHERGCY 1016
            FTW+N  + P  K  ++DR L +     LF  S  + L +  SDH+P+++     + G  
Sbjct: 909  FTWSNMQEHPVCK--RLDRFLYSNEWEQLFPQSLQDVLPRWTSDHWPIVLETNPFKXGPT 966

Query: 1015 PFRFSNYWSLHKDFK-AXXXXXXXXXXVGCPLFVLVYKLKILKSKLRGWARAYLSDI 848
            PFRF N W  H  FK +           G      + KL+ LK+KL+ W +    D+
Sbjct: 967  PFRFENMWLHHPSFKESFGSWWREFQGDGWEGHKFMRKLQFLKAKLKEWNKNAFGDL 1023