BLASTX nr result

ID: Coptis21_contig00023303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023303
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613318.1| Disease resistance-like protein 17-12 [Medic...    67   4e-18
ref|XP_003613271.1| NBS-LRR resistance protein [Medicago truncat...    67   3e-17
ref|XP_003613511.1| NBS resistance protein [Medicago truncatula]...    62   4e-17
ref|XP_003613325.1| Resistance protein [Medicago truncatula] gi|...    65   4e-17
gb|AFC87872.1| RB-like protein, partial [Solanum demissum]             68   8e-17

>ref|XP_003613318.1| Disease resistance-like protein 17-12 [Medicago truncatula]
           gi|355514653|gb|AES96276.1| Disease resistance-like
           protein 17-12 [Medicago truncatula]
          Length = 472

 Score = 67.4 bits (163), Expect(2) = 4e-18
 Identities = 32/53 (60%), Positives = 40/53 (75%)
 Frame = +1

Query: 109 DEEIKKLSNTLSAIRDVLEDAEEKQLTDKAIPNWLRKLKDAAYEADDVLDEWA 267
           D++ K LS+ L+ I+  LEDAEEKQ TDKAI +WL KLKDA +  DD+LDE A
Sbjct: 28  DQDFKSLSSLLTTIKATLEDAEEKQFTDKAIKDWLLKLKDAVHVLDDILDECA 80



 Score = 48.5 bits (114), Expect(2) = 4e-18
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = +2

Query: 335 QQITFRRKIAKRMDELRERFNEIADERSMFHLKDGVADRR 454
           + + FR KIAK+M  +RER NEIA+ERS FHL + V ++R
Sbjct: 106 KHVAFRYKIAKKMKSIRERLNEIAEERSKFHLIEMVKEKR 145


>ref|XP_003613271.1| NBS-LRR resistance protein [Medicago truncatula]
           gi|355514606|gb|AES96229.1| NBS-LRR resistance protein
           [Medicago truncatula]
          Length = 932

 Score = 66.6 bits (161), Expect(2) = 3e-17
 Identities = 31/53 (58%), Positives = 40/53 (75%)
 Frame = +1

Query: 109 DEEIKKLSNTLSAIRDVLEDAEEKQLTDKAIPNWLRKLKDAAYEADDVLDEWA 267
           +++ K LS+ ++ I+  LEDAEEKQ TDKA+  WL KLKDAAY  DD+LDE A
Sbjct: 28  EQDFKNLSSLITTIKATLEDAEEKQFTDKAVKVWLLKLKDAAYVLDDILDECA 80



 Score = 46.6 bits (109), Expect(2) = 3e-17
 Identities = 20/40 (50%), Positives = 31/40 (77%)
 Frame = +2

Query: 335 QQITFRRKIAKRMDELRERFNEIADERSMFHLKDGVADRR 454
           +Q+ FR KIAK+M  +RER +EIA+E++ FHL + V ++R
Sbjct: 110 KQVAFRYKIAKKMKSIRERLDEIAEEKTKFHLTEIVREKR 149


>ref|XP_003613511.1| NBS resistance protein [Medicago truncatula]
           gi|355514846|gb|AES96469.1| NBS resistance protein
           [Medicago truncatula]
          Length = 1071

 Score = 62.4 bits (150), Expect(2) = 4e-17
 Identities = 29/55 (52%), Positives = 41/55 (74%)
 Frame = +1

Query: 112 EEIKKLSNTLSAIRDVLEDAEEKQLTDKAIPNWLRKLKDAAYEADDVLDEWAMKL 276
           ++   LS+ LS+I+  LEDAEEKQ +++AI +WL KLKD AY  DD+LDE A ++
Sbjct: 29  QDFNSLSSLLSSIKATLEDAEEKQFSNRAIKDWLLKLKDTAYVLDDILDECATQV 83



 Score = 50.4 bits (119), Expect(2) = 4e-17
 Identities = 22/40 (55%), Positives = 32/40 (80%)
 Frame = +2

Query: 335 QQITFRRKIAKRMDELRERFNEIADERSMFHLKDGVADRR 454
           + + FR KIAK+M ++R+R NEIA+ERSMFHL + V ++R
Sbjct: 110 KHVAFRYKIAKKMKKIRDRLNEIAEERSMFHLTEIVKEKR 149


>ref|XP_003613325.1| Resistance protein [Medicago truncatula]
           gi|355514660|gb|AES96283.1| Resistance protein [Medicago
           truncatula]
          Length = 499

 Score = 65.5 bits (158), Expect(2) = 4e-17
 Identities = 32/53 (60%), Positives = 40/53 (75%)
 Frame = +1

Query: 109 DEEIKKLSNTLSAIRDVLEDAEEKQLTDKAIPNWLRKLKDAAYEADDVLDEWA 267
           +++ K LS+ L+ I+  LEDAEEKQ T KAI +WL KLKDAAY  DD+LDE A
Sbjct: 28  EKDFKSLSSLLTTIKATLEDAEEKQFTYKAIKDWLLKLKDAAYVLDDILDECA 80



 Score = 47.4 bits (111), Expect(2) = 4e-17
 Identities = 21/40 (52%), Positives = 30/40 (75%)
 Frame = +2

Query: 335 QQITFRRKIAKRMDELRERFNEIADERSMFHLKDGVADRR 454
           + + FR K+AK+M  +RER +EIA+ERS FHL + V +RR
Sbjct: 110 KHVAFRYKLAKKMKRIRERLDEIAEERSKFHLTEIVRERR 149


>gb|AFC87872.1| RB-like protein, partial [Solanum demissum]
          Length = 183

 Score = 67.8 bits (164), Expect(2) = 8e-17
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = +1

Query: 109 DEEIKKLSNTLSAIRDVLEDAEEKQLTDKAIPNWLRKLKDAAYEADDVLDE 261
           + E KKL +T S I+ V+EDA+EKQL DK + NWL KL  AAYEADD+LDE
Sbjct: 28  ENEFKKLLSTFSTIQIVIEDAQEKQLKDKPLENWLHKLNVAAYEADDILDE 78



 Score = 43.9 bits (102), Expect(2) = 8e-17
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = +2

Query: 341 ITFRRKIAKRMDELRERFNEIADERSMFHLKDGVADR 451
           ITFR KI KRM E+ E+ + IA ER+ FHL++ + +R
Sbjct: 99  ITFRLKIGKRMKEMMEKLDAIAKERAYFHLRENIIER 135


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