BLASTX nr result

ID: Coptis21_contig00023302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023302
         (1726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632755.1| PREDICTED: F-box/kelch-repeat protein At3g61...   405   e-110
ref|XP_002517599.1| ubiquitin-protein ligase, putative [Ricinus ...   393   e-107
ref|XP_002304150.1| predicted protein [Populus trichocarpa] gi|2...   382   e-103
ref|XP_004152210.1| PREDICTED: protein UNUSUAL FLORAL ORGANS-lik...   362   2e-97
ref|XP_003529811.1| PREDICTED: F-box only protein 6-like [Glycin...   349   1e-93

>ref|XP_003632755.1| PREDICTED: F-box/kelch-repeat protein At3g61590-like [Vitis vinifera]
          Length = 369

 Score =  405 bits (1042), Expect = e-110
 Identities = 204/370 (55%), Positives = 260/370 (70%), Gaps = 3/370 (0%)
 Frame = +1

Query: 88   MWNSISFDLLARIFSLLPPDSLACAASTCKDWYTCTKSHSTSTLLTGIRGNPPWFLAMTI 267
            MW+++ FDLLA IFS LP DSLA A+S CK W+TC  ++  +    G R NPPWF+A+ +
Sbjct: 1    MWSNLPFDLLANIFSFLPADSLALASSVCKHWHTCVTAYPATA--AGAR-NPPWFVALPV 57

Query: 268  PKHHGLSCYAYNSDLRRWYSL--EFLPHPIHPIAPVGNLILYRLANSPPLQLALCNPFTK 441
             ++ G +CY +N  +  W+ L   FLPH I P+A +G L+L R   S  LQLA+CN FTK
Sbjct: 58   -RNRGHTCYTHNPIIDTWHGLFLGFLPHAIRPVASIGGLVLLRSTTSTTLQLAICNLFTK 116

Query: 442  KCVSLPSLNTLRTTPAVGVV-AMDTDRDASSSSNFRIFXXXXXXXXXXXXXXXXYEPTLE 618
            +  SLP LN  RT PAVGVV  +D   D   SS FR++                YEPTLE
Sbjct: 117  RYWSLPMLNIARTNPAVGVVFGLDESPDVRFSS-FRVYVAGGMSEAPSGGAA--YEPTLE 173

Query: 619  MYDSRVNKWQNLGLMPIEFAVRLTVWTPNESVYSMGMLYWITSARAYSIMGYNVSSGMWK 798
            MYDS  ++W  +G MP+EFAVRLTVW+PNESVYS G+LYW+TSARAYS+MG ++ S  W+
Sbjct: 174  MYDSWQDRWDIMGRMPVEFAVRLTVWSPNESVYSGGVLYWMTSARAYSVMGLDIESNSWR 233

Query: 799  EVNVPMADRLEFAALVRRKERLTLIGGKNGGEACIWELGVGDMWLLLERVPIKLGKKFMG 978
            E++VPMA+RLEFAALVR   R TL+GG     ACIWELG GD W L+E++PI+LG + +G
Sbjct: 234  ELSVPMAERLEFAALVRWNGRPTLVGGTCNEGACIWELGEGDTWGLVEKIPIELGMRLLG 293

Query: 979  CRGSWCSTKCVGTDKAVYLYRNLGSKMLVWMEVKGNSRWEWFWVEGCCSIRGQQLPNFPI 1158
             +GSW STKCVG+D A+ LYR+LGS M+VW EV+   RWEW WVEGCCS+ G+Q+ N PI
Sbjct: 294  VKGSWESTKCVGSDGALCLYRDLGSGMVVWREVE-KGRWEWLWVEGCCSVGGKQVQNIPI 352

Query: 1159 KGVLLHPGLA 1188
            KG+LLHP LA
Sbjct: 353  KGLLLHPNLA 362


>ref|XP_002517599.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223543231|gb|EEF44763.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 367

 Score =  393 bits (1010), Expect = e-107
 Identities = 192/369 (52%), Positives = 250/369 (67%), Gaps = 2/369 (0%)
 Frame = +1

Query: 88   MWNSISFDLLARIFSLLPPDSLACAASTCKDWYTCTKSHSTSTLLTGIRGNPPWFLAMTI 267
            MW+S+ FDLLA IFS L PDSLA A S C+ W+TC  ++  S   + +  +PPWF+A+  
Sbjct: 1    MWSSLPFDLLANIFSFLSPDSLARARSACRHWHTCVDAYPLSLAPSMLHHHPPWFVALPT 60

Query: 268  PKHHGLSCYAYNSDLRRWY--SLEFLPHPIHPIAPVGNLILYRLANSPPLQLALCNPFTK 441
             ++    CY +N   +RW+  SLEFL  P  PI  +  LIL +   S  L LA+CNPFT+
Sbjct: 61   -RNREPCCYVHNPVTKRWHMLSLEFLSDPFRPITCISGLILLKATKSTILSLAMCNPFTR 119

Query: 442  KCVSLPSLNTLRTTPAVGVVAMDTDRDASSSSNFRIFXXXXXXXXXXXXXXXXYEPTLEM 621
            +   LP LN  RT PAVGVV ++      SS +FR++                YEPTLEM
Sbjct: 120  QFRHLPLLNIARTNPAVGVVILN------SSQHFRVYVAGGMSEASRGGAT--YEPTLEM 171

Query: 622  YDSRVNKWQNLGLMPIEFAVRLTVWTPNESVYSMGMLYWITSARAYSIMGYNVSSGMWKE 801
            YDSR N W+  G MP+EFAVRLTVW+PNESVYS G+LYWITSARA+S+M + + S  W+E
Sbjct: 172  YDSRHNTWKIAGSMPVEFAVRLTVWSPNESVYSNGILYWITSARAFSMMAFEIESNKWQE 231

Query: 802  VNVPMADRLEFAALVRRKERLTLIGGKNGGEACIWELGVGDMWLLLERVPIKLGKKFMGC 981
            V+VPMADRLEFA LV+R  RLTL+G   GGEA +W+L  GD+W L+E+VP++LG K +  
Sbjct: 232  VSVPMADRLEFATLVQRSGRLTLVGSTGGGEAFVWKLNKGDIWCLIEKVPVELGVKLLRG 291

Query: 982  RGSWCSTKCVGTDKAVYLYRNLGSKMLVWMEVKGNSRWEWFWVEGCCSIRGQQLPNFPIK 1161
            + SW S KCVG + A+ LYR+LGS MLVW EV+   +WEW WVEGCCSI G+Q+ N  ++
Sbjct: 292  KASWGSIKCVGGEGAICLYRDLGSGMLVWREVREKGKWEWLWVEGCCSINGKQVENISVR 351

Query: 1162 GVLLHPGLA 1188
            G+L+HP LA
Sbjct: 352  GLLIHPNLA 360


>ref|XP_002304150.1| predicted protein [Populus trichocarpa] gi|222841582|gb|EEE79129.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  382 bits (980), Expect = e-103
 Identities = 187/370 (50%), Positives = 249/370 (67%), Gaps = 2/370 (0%)
 Frame = +1

Query: 88   MWNSISFDLLARIFSLLPPDSLACAASTCKDWYTCTKSHSTSTLLTGIRGNPPWFLAMTI 267
            MWN +  +LLA IFS L PDSLA A + C+ W TC  S+  ST  + +R +  WF+A+  
Sbjct: 1    MWNRLPSELLANIFSFLSPDSLARAKTACRYWRTCANSYPLSTAASMVRHHQAWFVALPT 60

Query: 268  PKHHGLSCYAYNSDLRRWY--SLEFLPHPIHPIAPVGNLILYRLANSPPLQLALCNPFTK 441
             +  GL CY +N ++ +W+  SL+F PHP  PIA +G+LIL R  +S  LQLA+ NPFTK
Sbjct: 61   -RSRGLCCYLHNPNIDKWHVLSLDFQPHPTRPIASIGSLILSRPTDSTTLQLAISNPFTK 119

Query: 442  KCVSLPSLNTLRTTPAVGVVAMDTDRDASSSSNFRIFXXXXXXXXXXXXXXXXYEPTLEM 621
            +    P L   RT PAVGVV +   +   S  +FR++                YEPT+E+
Sbjct: 120  EFRCFPMLKIARTNPAVGVVILGPAQHGPSL-HFRVYVAGGMSEAPRGAAT--YEPTMEV 176

Query: 622  YDSRVNKWQNLGLMPIEFAVRLTVWTPNESVYSMGMLYWITSARAYSIMGYNVSSGMWKE 801
            YDS  + W+ +G +P+EFAVRLTVWTPNESVYS G+LYW+TSARAYSIMG+   S  W+E
Sbjct: 177  YDSEDDAWRIVGSVPVEFAVRLTVWTPNESVYSKGVLYWMTSARAYSIMGFEFRSNKWQE 236

Query: 802  VNVPMADRLEFAALVRRKERLTLIGGKNGGEACIWELGVGDMWLLLERVPIKLGKKFMGC 981
            ++V MAD+LEFA L +   RLTL+GG +GG+AC+WEL     W L E++P++L +K +G 
Sbjct: 237  LSVHMADKLEFATLAQLNGRLTLVGGTSGGDACVWELDERHAWCLKEKMPVELTRKLLGG 296

Query: 982  RGSWCSTKCVGTDKAVYLYRNLGSKMLVWMEVKGNSRWEWFWVEGCCSIRGQQLPNFPIK 1161
            + SW +TKCV  D A+ LYR+LGS M VW +V    RWEWFWVEGCCSI+G+++ N PIK
Sbjct: 297  KASWATTKCVRGDGAICLYRDLGSGMAVWRKVGERGRWEWFWVEGCCSIKGKRVQNLPIK 356

Query: 1162 GVLLHPGLAP 1191
            GVL+ P LAP
Sbjct: 357  GVLIPPNLAP 366


>ref|XP_004152210.1| PREDICTED: protein UNUSUAL FLORAL ORGANS-like [Cucumis sativus]
            gi|449484183|ref|XP_004156809.1| PREDICTED: protein
            UNUSUAL FLORAL ORGANS-like [Cucumis sativus]
          Length = 372

 Score =  362 bits (929), Expect = 2e-97
 Identities = 184/373 (49%), Positives = 247/373 (66%), Gaps = 3/373 (0%)
 Frame = +1

Query: 88   MWNSISFDLLARIFSLLPPDSLACAASTCKDWYTCTKSHSTSTLLTGIRGNPPWFLAMTI 267
            MW+S+ FDLLA IFS L PDSLA A S CK W+ C  +   +T     + +P WF+A+ +
Sbjct: 1    MWSSLPFDLLANIFSFLSPDSLARARSACKQWHECIDTCPLNTEPILSQSHPSWFIALPL 60

Query: 268  PKHHGLSCYAYNSDLRRWY--SLEFLPHPIHPIAPVGNLILYRLANSPPLQLALCNPFTK 441
              H    C+A+N  L  W+  SLEFLP  + PIA VG+L+  R  +S  LQL LCNPFT 
Sbjct: 61   RAHK--LCFAHNPILDNWHKLSLEFLPDLVKPIATVGSLLFLRSTSSVVLQLILCNPFTT 118

Query: 442  KCVSLPSLNTLRTTPAVGVVAMDTDRDASSSSNFRIFXXXXXXXXXXXXXXXXYEPTLEM 621
            +   LP  N  RT PAVGVV  +T +D S   +F+++                YE  LEM
Sbjct: 119  QFRYLPRPNISRTNPAVGVVIQNTRQD-SQIPDFKVYVAGGMSVAPQGGTT--YESKLEM 175

Query: 622  YDSRVNKWQNLGLMPIEFAVRLTVWTPNESVYSMGMLYWITSARAYSIMGYNVSSGMWKE 801
            YDSR + W+ +G +P+EFAVRLTVWT NESVYS G+LYWITSARA+S+MG+++ S   +E
Sbjct: 176  YDSRNDSWEIVGSLPVEFAVRLTVWTHNESVYSNGILYWITSARAFSVMGFDIDSNNCRE 235

Query: 802  VNVPMADRLEFAALVRRKERLTLIGGKNGGEACIWELGVGDMWLLLERVPIKLGKKFM-G 978
            + VPMADRLEFAAL  R  RLT++GG  G +AC+WE   GD+W+L+E+VP +LG+K + G
Sbjct: 236  LQVPMADRLEFAALTSRNGRLTIVGGVCGEDACVWECRDGDVWVLVEKVPNELGRKLVGG 295

Query: 979  CRGSWCSTKCVGTDKAVYLYRNLGSKMLVWMEVKGNSRWEWFWVEGCCSIRGQQLPNFPI 1158
              GSW ++KC   ++ + LY+ LG+ M+VW E K  + WEW W++GC SIRG+ + N PI
Sbjct: 296  SNGSWINSKCAWNNEVMCLYKELGNGMVVWRERKEKNTWEWVWIDGCSSIRGKIVHNLPI 355

Query: 1159 KGVLLHPGLAPLS 1197
            KG+LL P LAP +
Sbjct: 356  KGLLLQPSLAPFA 368


>ref|XP_003529811.1| PREDICTED: F-box only protein 6-like [Glycine max]
          Length = 369

 Score =  349 bits (895), Expect = 1e-93
 Identities = 177/378 (46%), Positives = 242/378 (64%), Gaps = 4/378 (1%)
 Frame = +1

Query: 82   LDMWNSISFDLLARIFSLLPPDSLACAASTCKDWYTCTKSHSTSTLLTGIRGNPPWFLAM 261
            + +W+++ FD+LA IFS L PDSLA A S CK+W+TC+K++  +T  T       WFLA+
Sbjct: 1    MSIWSNLPFDILANIFSFLSPDSLARARSVCKNWHTCSKAYRIATTTT-----TSWFLAL 55

Query: 262  TIPKHHGLSCYAYNSDLRRWYSLEFLPHPIHPIAPVGNLILYRLANSPPLQLALCNPFTK 441
             I ++HG  CYA+N  + +W+ L      I PIAP+G+L+L R+ NS  LQL LCNPFT+
Sbjct: 56   PI-RNHGPHCYAHNPVIDKWHQLSLPIPSIRPIAPIGSLLLSRVTNSTTLQLGLCNPFTR 114

Query: 442  KCVSLPSLNTLRTTPAVGVVAMDTDRDASSSSNFRIFXXXXXXXXXXXXXXXX--YEPTL 615
            +   LP L+  RT PAVGVV +    + + +  F  F                  YE  +
Sbjct: 115  EFRHLPRLHVARTNPAVGVVTISESSNPNHNVRFPSFRVYVAGGMSEAAQGGGATYETKV 174

Query: 616  EMYDSRVNKWQNLGLMPIEFAVRLTVWTPNESVYSMGMLYWITSARAYSIMGYNVSSGMW 795
            EMYDSR + W+ +G  P+EFAVRLTVWTPNE+V     LYW+TSARAYS+MG++V    W
Sbjct: 175  EMYDSRFDTWRIVGSTPVEFAVRLTVWTPNENVCIGETLYWVTSARAYSVMGFDVGRNTW 234

Query: 796  KEVNVPMADRLEFAALVRRKERLTLIGGKNGGEACIWELGVGDMWLLLERVPIKLGKKFM 975
             E+ VPMA++LEFA LV R   L L+GG  GG ACIWEL  GD W L+++VP++LG + +
Sbjct: 235  SELGVPMAEKLEFATLVPRNGALGLVGGTCGGTACIWELNEGDKWCLVDKVPLELGLRLL 294

Query: 976  GCRGSWCSTKCVGTDKAVYLYRNLGSKMLVWMEVKGN--SRWEWFWVEGCCSIRGQQLPN 1149
            G +    S KCVG + A+ LYR+LG  M++  +V G    RWEW WV+GC   +G+Q+ N
Sbjct: 295  GGK----SVKCVGNEDAICLYRDLGYGMVLCKKVVGEIMGRWEWVWVDGCGYTKGKQVYN 350

Query: 1150 FPIKGVLLHPGLAPLSII 1203
             PI+G L+HP LA  S+I
Sbjct: 351  CPIRGALVHPSLASSSLI 368


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