BLASTX nr result
ID: Coptis21_contig00023293
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023293 (1093 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containi... 379 e-103 ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 364 2e-98 ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 363 3e-98 ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containi... 359 8e-97 emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera] 359 8e-97 >ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520 [Vitis vinifera] Length = 640 Score = 379 bits (974), Expect = e-103 Identities = 187/309 (60%), Positives = 225/309 (72%) Frame = -2 Query: 1089 KDTFLCSTMIEVLGTHGKAEEAFTIFSYMRSTGIKPNDVTFVGLLKACSHVGLVDAGVKY 910 +D F S MI L HG E A FS M S IKPNDVTF+G+L ACSH+GLVD G Y Sbjct: 332 RDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTY 391 Query: 909 FHMMSEEFRLMPKVEHFGCVVDLLGRAGHIEEAHELIKSMPMDPHPIVWGALLSACRIHG 730 F MS+ + + PK+EH+GCVVD+LGRAG ++EA ELIKSMP P IVW ALL ACRI+ Sbjct: 392 FTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYK 451 Query: 729 NVKLAEEVALRLIELEPQSCGNYVLLSNIYSKAGRWDEAANLRRKMKEKGVVKKPGCSSI 550 NV++AEE + L+ELEP GNYVLLSNIYS+A WD+ N+RR MK + K PG SSI Sbjct: 452 NVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSI 511 Query: 549 AVNNVVNEFFAGDRAHSRSKEIYEKLDEIVTRLKTEGYAPRTSSALHDMDMDEKEQALLH 370 V+N V+EF AGD++H SK+I L EI RLK GYAP T+S L D D EKE AL H Sbjct: 512 EVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKEKENALAH 571 Query: 369 HSEKLAVAFGLISTDHKTPIRIVKNLRVCDDCHLFLKMISKYYNRQMIVRDCNRFHHFRD 190 HSEKLA+AFGL+ST + IRIVKNLRVCDDCH+ +K+IS+ Y R++IVRD NRFHHF + Sbjct: 572 HSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVN 631 Query: 189 GSCSCSDFW 163 GSCSC D+W Sbjct: 632 GSCSCKDYW 640 >ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Vitis vinifera] Length = 738 Score = 364 bits (934), Expect = 2e-98 Identities = 170/303 (56%), Positives = 224/303 (73%) Frame = -2 Query: 1071 STMIEVLGTHGKAEEAFTIFSYMRSTGIKPNDVTFVGLLKACSHVGLVDAGVKYFHMMSE 892 + MI L HG A A +F MR G +P+D+TFVG+L ACSH GLV+ G + F M E Sbjct: 436 NAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE 495 Query: 891 EFRLMPKVEHFGCVVDLLGRAGHIEEAHELIKSMPMDPHPIVWGALLSACRIHGNVKLAE 712 ++ + PK++H+GC++DLLGRAG +EA L+K+M M P +WG+LL ACR+HGNV+L E Sbjct: 496 DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGE 555 Query: 711 EVALRLIELEPQSCGNYVLLSNIYSKAGRWDEAANLRRKMKEKGVVKKPGCSSIAVNNVV 532 A L ELEP++ G YVLLSNIY+ AGRWD+ A +R K+ +KG+ K PGCSSI V++VV Sbjct: 556 FAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVV 615 Query: 531 NEFFAGDRAHSRSKEIYEKLDEIVTRLKTEGYAPRTSSALHDMDMDEKEQALLHHSEKLA 352 +EF GD+ H +S++IY+ LDEI L+ G+ P TS L+DMD + KE +L HHSEKLA Sbjct: 616 HEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLA 675 Query: 351 VAFGLISTDHKTPIRIVKNLRVCDDCHLFLKMISKYYNRQMIVRDCNRFHHFRDGSCSCS 172 +AFGLIST +T IRIVKNLRVC +CH +K+ISK +NR++I RD NRFHHF+DGSCSC Sbjct: 676 IAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCM 735 Query: 171 DFW 163 D+W Sbjct: 736 DYW 738 Score = 65.9 bits (159), Expect = 2e-08 Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 1/129 (0%) Frame = -2 Query: 1089 KDTFLCSTMIEVLGTHGKAEEAFTIFSYMRSTGIKPNDVTFVGLLKACSHVGLVDAGVKY 910 KD + MI +EA +F M+ + ++PNDVTFV +L AC+++G +D G Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387 Query: 909 FHMMSEEFRLMPKVEHFGCVVDLLGRAGHIEEAHELIKSMPMDPHPI-VWGALLSACRIH 733 + ++F + + ++D+ + G+IE A ++ M P + W A++S +H Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG--MKPKSLGSWNAMISGLAMH 445 Query: 732 GNVKLAEEV 706 G+ +A E+ Sbjct: 446 GHANMALEL 454 >ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Cucumis sativus] gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Cucumis sativus] Length = 734 Score = 363 bits (933), Expect = 3e-98 Identities = 168/310 (54%), Positives = 230/310 (74%) Frame = -2 Query: 1092 VKDTFLCSTMIEVLGTHGKAEEAFTIFSYMRSTGIKPNDVTFVGLLKACSHVGLVDAGVK 913 +K + MI L HG+A++AF +FS M S GI+PN++TFVG+L AC H GLVD G + Sbjct: 425 IKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQ 484 Query: 912 YFHMMSEEFRLMPKVEHFGCVVDLLGRAGHIEEAHELIKSMPMDPHPIVWGALLSACRIH 733 +F M +++++ PK +H+GC++DLLGRAG EEA L+++M + P +WG+LL ACR H Sbjct: 485 FFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDH 544 Query: 732 GNVKLAEEVALRLIELEPQSCGNYVLLSNIYSKAGRWDEAANLRRKMKEKGVVKKPGCSS 553 G V+L E VA RL ELEP + G YVLLSNIY+ AG+WD+ A +R ++ ++G+ K PGC++ Sbjct: 545 GRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTT 604 Query: 552 IAVNNVVNEFFAGDRAHSRSKEIYEKLDEIVTRLKTEGYAPRTSSALHDMDMDEKEQALL 373 I V+NVV+EF GD+ H +S++IY L+E+ +LK G+ TS L+DMD + KE AL Sbjct: 605 IEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALS 664 Query: 372 HHSEKLAVAFGLISTDHKTPIRIVKNLRVCDDCHLFLKMISKYYNRQMIVRDCNRFHHFR 193 HHSEKLA+AFGLIST TPIRI+KNLRVC +CH K+ISK +NR++I RD NRFHHF+ Sbjct: 665 HHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFK 724 Query: 192 DGSCSCSDFW 163 DGSCSC+D+W Sbjct: 725 DGSCSCNDYW 734 >ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like [Vitis vinifera] Length = 731 Score = 359 bits (921), Expect = 8e-97 Identities = 171/309 (55%), Positives = 224/309 (72%) Frame = -2 Query: 1089 KDTFLCSTMIEVLGTHGKAEEAFTIFSYMRSTGIKPNDVTFVGLLKACSHVGLVDAGVKY 910 +D + + +I HG EEA IF+ M G+KPND+TF+GLL ACSH GLV G K Sbjct: 423 RDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKL 482 Query: 909 FHMMSEEFRLMPKVEHFGCVVDLLGRAGHIEEAHELIKSMPMDPHPIVWGALLSACRIHG 730 F M F L+P++EH+GC+VDLLGRAG ++EAHE+IKSMP+ P+ IVWGAL++ACR+H Sbjct: 483 FEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHK 542 Query: 729 NVKLAEEVALRLIELEPQSCGNYVLLSNIYSKAGRWDEAANLRRKMKEKGVVKKPGCSSI 550 N +L E A +L+E+EP++CG VL+SNIY+ A RW +AA +R+ MK G+ K+PG S I Sbjct: 543 NPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVI 602 Query: 549 AVNNVVNEFFAGDRAHSRSKEIYEKLDEIVTRLKTEGYAPRTSSALHDMDMDEKEQALLH 370 VN V+EF GD++H + + I E L E+ +L GY P TS+ L ++D +EKE AL + Sbjct: 603 EVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTY 662 Query: 369 HSEKLAVAFGLISTDHKTPIRIVKNLRVCDDCHLFLKMISKYYNRQMIVRDCNRFHHFRD 190 HSEKLA+AFGLIST TPIRIVKNLRVC+DCH K++SK Y R +IVRD NRFHHFR+ Sbjct: 663 HSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFRE 722 Query: 189 GSCSCSDFW 163 G CSC D+W Sbjct: 723 GYCSCGDYW 731 Score = 58.2 bits (139), Expect = 4e-06 Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 5/171 (2%) Frame = -2 Query: 1089 KDTFLCSTMIEVLGTHGKAEEAFTIFSYMRSTGIKPNDVTFVGLLKACSHVGLVDAGVKY 910 +D + + M+ ++AF +F MR++G++P VT V LL C+ G +D G K+ Sbjct: 322 RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG-KW 380 Query: 909 FHMMSEEFRLMPKVEHFGCVVDLLGRAGHIEEAHEL-IKSMPMDPHPIVWGALLSACRIH 733 H ++ R+ +VD+ + G I A L I+++ D +W A+++ +H Sbjct: 381 VHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRD--ICMWNAIITGFAMH 438 Query: 732 GNVKLAEEVALRLIELEPQSCG----NYVLLSNIYSKAGRWDEAANLRRKM 592 G EE E+E Q ++ L + S AG E L KM Sbjct: 439 G---YGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKM 486 >emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera] Length = 771 Score = 359 bits (921), Expect = 8e-97 Identities = 171/309 (55%), Positives = 224/309 (72%) Frame = -2 Query: 1089 KDTFLCSTMIEVLGTHGKAEEAFTIFSYMRSTGIKPNDVTFVGLLKACSHVGLVDAGVKY 910 +D + + +I HG EEA IF+ M G+KPND+TF+GLL ACSH GLV G K Sbjct: 463 RDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKL 522 Query: 909 FHMMSEEFRLMPKVEHFGCVVDLLGRAGHIEEAHELIKSMPMDPHPIVWGALLSACRIHG 730 F M F L+P++EH+GC+VDLLGRAG ++EAHE+IKSMP+ P+ IVWGAL++ACR+H Sbjct: 523 FEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHK 582 Query: 729 NVKLAEEVALRLIELEPQSCGNYVLLSNIYSKAGRWDEAANLRRKMKEKGVVKKPGCSSI 550 N +L E A +L+E+EP++CG VL+SNIY+ A RW +AA +R+ MK G+ K+PG S I Sbjct: 583 NPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVI 642 Query: 549 AVNNVVNEFFAGDRAHSRSKEIYEKLDEIVTRLKTEGYAPRTSSALHDMDMDEKEQALLH 370 VN V+EF GD++H + + I E L E+ +L GY P TS+ L ++D +EKE AL + Sbjct: 643 EVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTY 702 Query: 369 HSEKLAVAFGLISTDHKTPIRIVKNLRVCDDCHLFLKMISKYYNRQMIVRDCNRFHHFRD 190 HSEKLA+AFGLIST TPIRIVKNLRVC+DCH K++SK Y R +IVRD NRFHHFR+ Sbjct: 703 HSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFRE 762 Query: 189 GSCSCSDFW 163 G CSC D+W Sbjct: 763 GYCSCGDYW 771 Score = 58.2 bits (139), Expect = 4e-06 Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 5/171 (2%) Frame = -2 Query: 1089 KDTFLCSTMIEVLGTHGKAEEAFTIFSYMRSTGIKPNDVTFVGLLKACSHVGLVDAGVKY 910 +D + + M+ ++AF +F MR++G++P VT V LL C+ G +D G K+ Sbjct: 362 RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG-KW 420 Query: 909 FHMMSEEFRLMPKVEHFGCVVDLLGRAGHIEEAHEL-IKSMPMDPHPIVWGALLSACRIH 733 H ++ R+ +VD+ + G I A L I+++ D +W A+++ +H Sbjct: 421 VHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRD--ICMWNAIITGFAMH 478 Query: 732 GNVKLAEEVALRLIELEPQSCG----NYVLLSNIYSKAGRWDEAANLRRKM 592 G EE E+E Q ++ L + S AG E L KM Sbjct: 479 G---YGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKM 526