BLASTX nr result

ID: Coptis21_contig00023264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023264
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633085.1| PREDICTED: uncharacterized protein LOC100242...   140   1e-31
ref|XP_002321771.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
ref|XP_002511060.1| conserved hypothetical protein [Ricinus comm...   125   4e-27
ref|XP_002871267.1| predicted protein [Arabidopsis lyrata subsp....   116   2e-24
ref|NP_001031848.1| uncharacterized protein [Arabidopsis thalian...   115   5e-24

>ref|XP_003633085.1| PREDICTED: uncharacterized protein LOC100242180 [Vitis vinifera]
           gi|297738488|emb|CBI27733.3| unnamed protein product
           [Vitis vinifera]
          Length = 646

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/113 (61%), Positives = 83/113 (73%)
 Frame = +1

Query: 1   VKRWLQELKDTLEEPLQAAFLFKNDLAGSTDRILCNLFTSAEQIVDSFRPCQTCRCHGLP 180
           VKRWLQ+LKD +EEPLQA F+FK +L GS ++I CN   S   I D F PCQTCRCHG+P
Sbjct: 200 VKRWLQDLKDDIEEPLQACFIFKTNLVGSVNQISCNFSISFNHITDGFSPCQTCRCHGIP 259

Query: 181 LDGSGGNKSKRPSSCSITCQGLMTTDLIDNAVKVGDHTLLFLPSFQSFPELQQ 339
           LD   GNK K P SC +T   L T DLI+N VK+G+ T+LFLPSF+SF +LQQ
Sbjct: 260 LDDVIGNKIKVP-SCWVTGVKLGTYDLIENFVKIGEQTMLFLPSFKSFMKLQQ 311


>ref|XP_002321771.1| predicted protein [Populus trichocarpa] gi|222868767|gb|EEF05898.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score =  128 bits (321), Expect = 5e-28
 Identities = 64/113 (56%), Positives = 85/113 (75%)
 Frame = +1

Query: 1   VKRWLQELKDTLEEPLQAAFLFKNDLAGSTDRILCNLFTSAEQIVDSFRPCQTCRCHGLP 180
           VKRWLQELKD +EEPLQA F+FK++L GS ++I C+L TS  QI+D F  C+TCRCHG  
Sbjct: 207 VKRWLQELKDDMEEPLQARFIFKSNLTGSLNQIFCSLSTSVCQIIDGFSACETCRCHGSV 266

Query: 181 LDGSGGNKSKRPSSCSITCQGLMTTDLIDNAVKVGDHTLLFLPSFQSFPELQQ 339
           LD    +K K  +SC IT + L  +D+I+N+V+VGD T+LF+PSFQS  +L+Q
Sbjct: 267 LDNRIKDK-KVGASCPITGRDLEISDVIENSVQVGDKTVLFMPSFQSSMKLKQ 318


>ref|XP_002511060.1| conserved hypothetical protein [Ricinus communis]
           gi|223550175|gb|EEF51662.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 653

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/112 (52%), Positives = 81/112 (72%)
 Frame = +1

Query: 4   KRWLQELKDTLEEPLQAAFLFKNDLAGSTDRILCNLFTSAEQIVDSFRPCQTCRCHGLPL 183
           KRWLQ+L+D ++EPLQA F+F+ +L GS + I C+L  S  QI+D F  CQTCRCHG+ L
Sbjct: 212 KRWLQDLEDDIDEPLQACFIFQTNLVGSLNHISCSLSISVRQIIDEFSACQTCRCHGVLL 271

Query: 184 DGSGGNKSKRPSSCSITCQGLMTTDLIDNAVKVGDHTLLFLPSFQSFPELQQ 339
           D +  +K +R  SC +T   L T D++DN+VKVGD T+LF+PSFQS  ++ Q
Sbjct: 272 DHAAKDKLER-LSCPVTGHDLGTADVVDNSVKVGDKTILFMPSFQSSMKVHQ 322


>ref|XP_002871267.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317104|gb|EFH47526.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 646

 Score =  116 bits (291), Expect = 2e-24
 Identities = 58/110 (52%), Positives = 73/110 (66%)
 Frame = +1

Query: 4   KRWLQELKDTLEEPLQAAFLFKNDLAGSTDRILCNLFTSAEQIVDSFRPCQTCRCHGLPL 183
           KRWLQELKD   E LQA  +FK+++ GS ++I CNL  +  QIVD F PC+TCRCHG PL
Sbjct: 205 KRWLQELKDDTGESLQAQIIFKSNIVGSVNKIFCNLTAATNQIVDGFSPCRTCRCHGFPL 264

Query: 184 DGSGGNKSKRPSSCSITCQGLMTTDLIDNAVKVGDHTLLFLPSFQSFPEL 333
             S  N  +    CSIT   L   D+I+N+VK+GD T+LFLPS  S  +L
Sbjct: 265 LDSVKNTMEN-LKCSITNHELGKYDVIENSVKIGDRTVLFLPSIHSLQKL 313


>ref|NP_001031848.1| uncharacterized protein [Arabidopsis thaliana]
           gi|79508236|ref|NP_196355.2| uncharacterized protein
           [Arabidopsis thaliana] gi|55978831|gb|AAV68877.1|
           hypothetical protein AT5G07380 [Arabidopsis thaliana]
           gi|55978833|gb|AAV68878.1| hypothetical protein
           AT5G07380 [Arabidopsis thaliana]
           gi|61742743|gb|AAX55192.1| hypothetical protein
           At5g07380 [Arabidopsis thaliana]
           gi|332003765|gb|AED91148.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332003766|gb|AED91149.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 641

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/110 (50%), Positives = 72/110 (65%)
 Frame = +1

Query: 4   KRWLQELKDTLEEPLQAAFLFKNDLAGSTDRILCNLFTSAEQIVDSFRPCQTCRCHGLPL 183
           KRWLQELKD   E LQA  +FK++L GS +++ CN+  +  QIVD F PCQTCRCHG+PL
Sbjct: 204 KRWLQELKDDTGESLQAQIIFKSNLVGSVNKVFCNITAATNQIVDGFIPCQTCRCHGIPL 263

Query: 184 DGSGGNKSKRPSSCSITCQGLMTTDLIDNAVKVGDHTLLFLPSFQSFPEL 333
             S   K      CS+T   L   D+I+N+VKVG+ T LFLP+  S  +L
Sbjct: 264 QDS-VEKPTEKLKCSVTNHELGKYDVIENSVKVGNRTTLFLPTIHSLQKL 312


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