BLASTX nr result

ID: Coptis21_contig00023259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023259
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17878.3| unnamed protein product [Vitis vinifera]              211   4e-53
ref|XP_002265761.1| PREDICTED: uncharacterized membrane protein ...   211   4e-53
gb|AFK36028.1| unknown [Lotus japonicus]                              194   8e-48
ref|XP_003545089.1| PREDICTED: uncharacterized membrane protein ...   194   8e-48
ref|XP_003519639.1| PREDICTED: uncharacterized membrane protein ...   193   1e-47

>emb|CBI17878.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score =  211 bits (538), Expect = 4e-53
 Identities = 108/154 (70%), Positives = 121/154 (78%)
 Frame = +3

Query: 3   SDAGERGRALEDLRASLYNEIRTSEGAKRQQQRICGPSIALSFNFLVSVGIILTNKLVLG 182
           SDAGE+G+A+E+LRASL+NE+R+SEGAKRQQQRICGPS+AL+FNFLVSVGIIL NKLVLG
Sbjct: 19  SDAGEKGKAMEELRASLFNELRSSEGAKRQQQRICGPSVALTFNFLVSVGIILMNKLVLG 78

Query: 183 RVGFNYPIFLTFIHYALSWFLMAIXXXXXXXXXXXXXXXXXFXXXXXXXXXXXXXNGLAN 362
           RVGFNYPIFLTFIHY LSW LMAI                 F             NGLAN
Sbjct: 79  RVGFNYPIFLTFIHYTLSWLLMAILNALSMLPAAPPSKSTPFSSLLSLGIVMSLSNGLAN 138

Query: 363 VSLKFNSVGFYQMAKIAVTPTIVLAEFVLFSKKV 464
           VSLK+NSVGFYQMAKIAVTPTIVLAEF+LF+K+V
Sbjct: 139 VSLKYNSVGFYQMAKIAVTPTIVLAEFILFAKRV 172


>ref|XP_002265761.1| PREDICTED: uncharacterized membrane protein At1g06890 [Vitis
           vinifera]
          Length = 388

 Score =  211 bits (538), Expect = 4e-53
 Identities = 108/154 (70%), Positives = 121/154 (78%)
 Frame = +3

Query: 3   SDAGERGRALEDLRASLYNEIRTSEGAKRQQQRICGPSIALSFNFLVSVGIILTNKLVLG 182
           SDAGE+G+A+E+LRASL+NE+R+SEGAKRQQQRICGPS+AL+FNFLVSVGIIL NKLVLG
Sbjct: 25  SDAGEKGKAMEELRASLFNELRSSEGAKRQQQRICGPSVALTFNFLVSVGIILMNKLVLG 84

Query: 183 RVGFNYPIFLTFIHYALSWFLMAIXXXXXXXXXXXXXXXXXFXXXXXXXXXXXXXNGLAN 362
           RVGFNYPIFLTFIHY LSW LMAI                 F             NGLAN
Sbjct: 85  RVGFNYPIFLTFIHYTLSWLLMAILNALSMLPAAPPSKSTPFSSLLSLGIVMSLSNGLAN 144

Query: 363 VSLKFNSVGFYQMAKIAVTPTIVLAEFVLFSKKV 464
           VSLK+NSVGFYQMAKIAVTPTIVLAEF+LF+K+V
Sbjct: 145 VSLKYNSVGFYQMAKIAVTPTIVLAEFILFAKRV 178


>gb|AFK36028.1| unknown [Lotus japonicus]
          Length = 384

 Score =  194 bits (492), Expect = 8e-48
 Identities = 95/154 (61%), Positives = 114/154 (74%)
 Frame = +3

Query: 3   SDAGERGRALEDLRASLYNEIRTSEGAKRQQQRICGPSIALSFNFLVSVGIILTNKLVLG 182
           SDAGE GRALE++R SLYNE+RTSEGAKRQQQR CGP++AL+FNF+V+VGII+ NKLV+G
Sbjct: 20  SDAGEAGRALEEMRGSLYNELRTSEGAKRQQQRYCGPTVALTFNFMVAVGIIMANKLVMG 79

Query: 183 RVGFNYPIFLTFIHYALSWFLMAIXXXXXXXXXXXXXXXXXFXXXXXXXXXXXXXNGLAN 362
           +VGFN+PIFLTF+HY  +W L+AI                 F             +GLAN
Sbjct: 80  KVGFNFPIFLTFVHYITAWLLLAIFKALAVLPVSPPSKTTPFSSIFALGAVMAFASGLAN 139

Query: 363 VSLKFNSVGFYQMAKIAVTPTIVLAEFVLFSKKV 464
            SLK+NSVGFYQMAKIAVTPTIVLAEF+LF K +
Sbjct: 140 TSLKYNSVGFYQMAKIAVTPTIVLAEFILFGKTI 173


>ref|XP_003545089.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Glycine
           max]
          Length = 383

 Score =  194 bits (492), Expect = 8e-48
 Identities = 97/154 (62%), Positives = 113/154 (73%)
 Frame = +3

Query: 3   SDAGERGRALEDLRASLYNEIRTSEGAKRQQQRICGPSIALSFNFLVSVGIILTNKLVLG 182
           SDAG+ G+ALE+LRASLYNEIRTSEGAKRQQQR CGP +ALSFNF+VSVGII+ NKLV+G
Sbjct: 20  SDAGDAGKALEELRASLYNEIRTSEGAKRQQQRYCGPVVALSFNFMVSVGIIMANKLVMG 79

Query: 183 RVGFNYPIFLTFIHYALSWFLMAIXXXXXXXXXXXXXXXXXFXXXXXXXXXXXXXNGLAN 362
           +VGFN+PIFLTF+HY  +W L+AI                 F             +GLAN
Sbjct: 80  KVGFNFPIFLTFVHYITAWLLLAIFKTLSVLPVSPPSKTTPFSSLFALGVVMAFASGLAN 139

Query: 363 VSLKFNSVGFYQMAKIAVTPTIVLAEFVLFSKKV 464
            SLK+NSVGFYQMAKIAVTPTIVLAEF+LF   +
Sbjct: 140 TSLKYNSVGFYQMAKIAVTPTIVLAEFILFGNTI 173


>ref|XP_003519639.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Glycine
           max]
          Length = 376

 Score =  193 bits (490), Expect = 1e-47
 Identities = 97/154 (62%), Positives = 113/154 (73%)
 Frame = +3

Query: 3   SDAGERGRALEDLRASLYNEIRTSEGAKRQQQRICGPSIALSFNFLVSVGIILTNKLVLG 182
           SDAG+ GRALE+LRASLYNEIRTSEGAKRQQQR CGP +ALSFNF+V+VGII+ NKLV+G
Sbjct: 20  SDAGDAGRALEELRASLYNEIRTSEGAKRQQQRYCGPVVALSFNFMVAVGIIMANKLVMG 79

Query: 183 RVGFNYPIFLTFIHYALSWFLMAIXXXXXXXXXXXXXXXXXFXXXXXXXXXXXXXNGLAN 362
           +VGFN+PIFLTF+HY  +W L+AI                 F             +GLAN
Sbjct: 80  KVGFNFPIFLTFVHYITAWLLLAIFKTLSVLPVSPPSKTTPFSSLFALGVVMAFASGLAN 139

Query: 363 VSLKFNSVGFYQMAKIAVTPTIVLAEFVLFSKKV 464
            SLK+NSVGFYQMAKIAVTPTIVLAEF+ F K +
Sbjct: 140 TSLKYNSVGFYQMAKIAVTPTIVLAEFIHFGKTI 173


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