BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023257
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]    80   2e-13
ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containi...    72   5e-11
ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]    66   3e-09

>ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 590

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/68 (52%), Positives = 50/68 (73%)
 Frame = +2

Query: 104 PLNRCFFCNFIQPRIRNFSTNDIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNAM 283
           P+   F   F    I+ FST D+Y+ NV+IG+ AR+G I AAR+LFD+MP RD V+WN++
Sbjct: 25  PIFHSFNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSI 84

Query: 284 VTGYWQNG 307
           +TGYW+NG
Sbjct: 85  ITGYWKNG 92


>emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
          Length = 1301

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/68 (51%), Positives = 50/68 (73%)
 Frame = +2

Query: 104 PLNRCFFCNFIQPRIRNFSTNDIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNAM 283
           P+   F   F    I+ FST D+Y+ NV+IG+ AR+G I AAR++FD+MP RD V+WN++
Sbjct: 25  PIFHSFNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSI 84

Query: 284 VTGYWQNG 307
           +TGYW+NG
Sbjct: 85  ITGYWKNG 92


>ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 579

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 29/50 (58%), Positives = 42/50 (84%)
 Frame = +2

Query: 158 STNDIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNAMVTGYWQNG 307
           ST D+Y  N++I   +R+GK++AARKLFD+M ++DVVTWN+M++ YWQNG
Sbjct: 25  STRDVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNG 74


>ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Vitis vinifera]
          Length = 681

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/65 (47%), Positives = 41/65 (63%)
 Frame = +2

Query: 101 PPLNRCFFCNFIQPRIRNFSTNDIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNA 280
           PP   CF     QP+  N  + D+Y+ N  I H  R+G+I  AR LFD MP R++VTWN+
Sbjct: 46  PPHLHCFVSTLQQPK--NSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNS 103

Query: 281 MVTGY 295
           M+TGY
Sbjct: 104 MITGY 108



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = +2

Query: 167 DIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNAMVTGYWQNGYRGIEKVVHGYAR 346
           D  S N  I  Y RSG+++ A +LFD M  R+VV+WNAMVTG+ QNG   +E+ +  + R
Sbjct: 161 DCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNG--DVERAIEFFMR 218


>emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
          Length = 761

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/65 (47%), Positives = 41/65 (63%)
 Frame = +2

Query: 101 PPLNRCFFCNFIQPRIRNFSTNDIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNA 280
           PP   CF     QP+  N  + D+Y+ N  I H  R+G+I  AR LFD MP R++VTWN+
Sbjct: 46  PPHLHCFVSTLQQPK--NSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNS 103

Query: 281 MVTGY 295
           M+TGY
Sbjct: 104 MITGY 108



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = +2

Query: 167 DIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNAMVTGYWQNGYRGIEKVVHGYAR 346
           D  S N  I  Y RSG+++ A +LFD M  R+VV+WNAMVTG+ QNG   +E+ +  + R
Sbjct: 161 DCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNG--DVERAIEFFMR 218