BLASTX nr result
ID: Coptis21_contig00023257
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023257 (352 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containi... 81 1e-13 emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera] 80 2e-13 ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containi... 72 5e-11 ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containi... 66 3e-09 emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera] 66 3e-09 >ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Vitis vinifera] Length = 590 Score = 80.9 bits (198), Expect = 1e-13 Identities = 36/68 (52%), Positives = 50/68 (73%) Frame = +2 Query: 104 PLNRCFFCNFIQPRIRNFSTNDIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNAM 283 P+ F F I+ FST D+Y+ NV+IG+ AR+G I AAR+LFD+MP RD V+WN++ Sbjct: 25 PIFHSFNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSI 84 Query: 284 VTGYWQNG 307 +TGYW+NG Sbjct: 85 ITGYWKNG 92 >emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera] Length = 1301 Score = 79.7 bits (195), Expect = 2e-13 Identities = 35/68 (51%), Positives = 50/68 (73%) Frame = +2 Query: 104 PLNRCFFCNFIQPRIRNFSTNDIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNAM 283 P+ F F I+ FST D+Y+ NV+IG+ AR+G I AAR++FD+MP RD V+WN++ Sbjct: 25 PIFHSFNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSI 84 Query: 284 VTGYWQNG 307 +TGYW+NG Sbjct: 85 ITGYWKNG 92 >ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Glycine max] Length = 579 Score = 72.0 bits (175), Expect = 5e-11 Identities = 29/50 (58%), Positives = 42/50 (84%) Frame = +2 Query: 158 STNDIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNAMVTGYWQNG 307 ST D+Y N++I +R+GK++AARKLFD+M ++DVVTWN+M++ YWQNG Sbjct: 25 STRDVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNG 74 >ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial [Vitis vinifera] Length = 681 Score = 66.2 bits (160), Expect = 3e-09 Identities = 31/65 (47%), Positives = 41/65 (63%) Frame = +2 Query: 101 PPLNRCFFCNFIQPRIRNFSTNDIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNA 280 PP CF QP+ N + D+Y+ N I H R+G+I AR LFD MP R++VTWN+ Sbjct: 46 PPHLHCFVSTLQQPK--NSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNS 103 Query: 281 MVTGY 295 M+TGY Sbjct: 104 MITGY 108 Score = 57.8 bits (138), Expect = 9e-07 Identities = 28/60 (46%), Positives = 39/60 (65%) Frame = +2 Query: 167 DIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNAMVTGYWQNGYRGIEKVVHGYAR 346 D S N I Y RSG+++ A +LFD M R+VV+WNAMVTG+ QNG +E+ + + R Sbjct: 161 DCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNG--DVERAIEFFMR 218 >emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera] Length = 761 Score = 66.2 bits (160), Expect = 3e-09 Identities = 31/65 (47%), Positives = 41/65 (63%) Frame = +2 Query: 101 PPLNRCFFCNFIQPRIRNFSTNDIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNA 280 PP CF QP+ N + D+Y+ N I H R+G+I AR LFD MP R++VTWN+ Sbjct: 46 PPHLHCFVSTLQQPK--NSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNS 103 Query: 281 MVTGY 295 M+TGY Sbjct: 104 MITGY 108 Score = 57.8 bits (138), Expect = 9e-07 Identities = 28/60 (46%), Positives = 39/60 (65%) Frame = +2 Query: 167 DIYSCNVEIGHYARSGKIEAARKLFDKMPSRDVVTWNAMVTGYWQNGYRGIEKVVHGYAR 346 D S N I Y RSG+++ A +LFD M R+VV+WNAMVTG+ QNG +E+ + + R Sbjct: 161 DCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNG--DVERAIEFFMR 218