BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023236
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301939.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_002510616.1| pentatricopeptide repeat-containing protein,...    71   8e-11
ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containi...    69   3e-10
ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containi...    69   3e-10

>ref|XP_002301939.1| predicted protein [Populus trichocarpa] gi|222843665|gb|EEE81212.1|
           predicted protein [Populus trichocarpa]
          Length = 613

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/60 (61%), Positives = 42/60 (70%)
 Frame = -1

Query: 187 CETIHTTLIKRGNYNDGFIGSQLVGLYAEFSNLNGALKLFDELPDKDLISWNSMISVFSR 8
           C  +H  +IK  NYN GFIG QLV  Y E      AL+LFDELPDKDL+SWNS+IS FSR
Sbjct: 57  CRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSR 116


>ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Glycine max]
          Length = 626

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/62 (54%), Positives = 40/62 (64%)
 Frame = -1

Query: 187 CETIHTTLIKRGNYNDGFIGSQLVGLYAEFSNLNGALKLFDELPDKDLISWNSMISVFSR 8
           C  IH  +IK  +Y DGFIG QLV  Y    +   A KLFDE+P KD ISWNS++S FSR
Sbjct: 70  CRVIHARVIKSLDYRDGFIGDQLVSCYLNMGSTPDAQKLFDEMPHKDSISWNSLVSGFSR 129

Query: 7   NG 2
            G
Sbjct: 130 IG 131


>ref|XP_002510616.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551317|gb|EEF52803.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 390

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/62 (51%), Positives = 40/62 (64%)
 Frame = -1

Query: 187 CETIHTTLIKRGNYNDGFIGSQLVGLYAEFSNLNGALKLFDELPDKDLISWNSMISVFSR 8
           C  +H+ +IK  +YN GF+G Q V  Y        A  LFDELP+KDL+SWNS+IS FSR
Sbjct: 62  CGVLHSRVIKSLSYNHGFVGDQFVSAYVRLGCTKDAQNLFDELPEKDLVSWNSLISGFSR 121

Query: 7   NG 2
            G
Sbjct: 122 RG 123


>ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/60 (55%), Positives = 39/60 (65%)
 Frame = -1

Query: 187 CETIHTTLIKRGNYNDGFIGSQLVGLYAEFSNLNGALKLFDELPDKDLISWNSMISVFSR 8
           C  IH  + K   Y DGFIG QLV  Y +      ALKLFD++P KDL+SWNS+IS FSR
Sbjct: 58  CREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR 117


>ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/60 (55%), Positives = 39/60 (65%)
 Frame = -1

Query: 187 CETIHTTLIKRGNYNDGFIGSQLVGLYAEFSNLNGALKLFDELPDKDLISWNSMISVFSR 8
           C  IH  + K   Y DGFIG QLV  Y +      ALKLFD++P KDL+SWNS+IS FSR
Sbjct: 58  CREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR 117