BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023224
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545312.1| PREDICTED: glutamate receptor 3.2-like [Glyc...    77   1e-12
ref|XP_002310140.1| glutamate-gated kainate-type ion channel rec...    77   1e-12
ref|XP_003541827.1| PREDICTED: glutamate receptor 2.8-like [Glyc...    74   1e-11
ref|XP_002300411.1| glutamate-gated kainate-type ion channel rec...    71   1e-10
ref|XP_002327147.1| glutamate-gated kainate-type ion channel rec...    71   1e-10

>ref|XP_003545312.1| PREDICTED: glutamate receptor 3.2-like [Glycine max]
          Length = 865

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   YDTLSTLAFALEKSSNRTTLLENILSSNFSGLSGQIKFTNGELSRSTTYEVVNVLGKKYI 182
           YD + T+  AL+KS    +L ENIL SN  GLSG+I F +  L    T+++VNV+GK Y 
Sbjct: 344 YDAVWTITHALKKSQGNFSLSENILHSNHEGLSGKISFKDKMLLEPPTFKIVNVIGKGYK 403

Query: 183 VLKSWSAEYGFSDNVIDKMV---QVKNTVGAVMQVLGNRVYWP 302
            L +WS   GFS+N+++ MV   +  +  G+   +LG+ V WP
Sbjct: 404 ELANWSPGSGFSENLVENMVVNTRRTSRAGSARVLLGS-VDWP 445


>ref|XP_002310140.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222853043|gb|EEE90590.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 760

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 7/107 (6%)
 Frame = +3

Query: 3   YDTLSTLAFA---LEKSSNRTTLLENILSSNFSGLSGQIKFTNGELSRSTTYEVVNVLGK 173
           YD + T+A +   L + +   TLL++ILSS+F GLSG+I FTN +L+    +++VN++GK
Sbjct: 331 YDAIWTVAKSSKMLHEKNYSKTLLQHILSSDFEGLSGRIHFTNYKLTYGPNFQIVNIVGK 390

Query: 174 KYIVLKSWSAEYGFSDNVIDKMVQVKNTVGAVMQVLG----NRVYWP 302
            Y  L  WS E+GF+DN+      VKN  G      G    N VYWP
Sbjct: 391 SYRELGFWSPEFGFTDNL------VKNNSGKDRSQSGEEVLNPVYWP 431


>ref|XP_003541827.1| PREDICTED: glutamate receptor 2.8-like [Glycine max]
          Length = 891

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
 Frame = +3

Query: 3   YDTLSTLAFALEKSSNR--TTLLENILSSNFSGLSGQIKFTNGELSRSTTYEVVNVLGKK 176
           YD   TLA A+ ++ N+    LL+NIL +NF+GLSG+I+FT+ +L  S T+++ NV+GK 
Sbjct: 344 YDAAWTLALAMTQTDNKGGQILLDNILLNNFTGLSGKIQFTDQKLDPSNTFQITNVIGKG 403

Query: 177 YIVLKSWSAEYGFSDNVIDKMVQVKNTVGAVMQVLGNRVYWP 302
           Y  +  WS   GFS+N+     Q   T  + M+ LG +V WP
Sbjct: 404 YKEVGFWSDGLGFSNNI----GQNATTFNSSMKELG-QVLWP 440


>ref|XP_002300411.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222847669|gb|EEE85216.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 829

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   YDTLSTLAFALEKSSNRT---TLLENILSSNFSGLSGQIKFTNGELSRSTTYEVVNVLGK 173
           YD + T+A  L K+ ++     LLENIL ++F GLSG++KF N  ++ +  +E+VNV+G 
Sbjct: 325 YDAMRTIALGLIKTGSKRGGKELLENILDADFHGLSGKVKFKNQNVAAAEIFEIVNVIGT 384

Query: 174 KYIVLKSWSAEYGFSDNVIDKMVQVKNTVGAVMQVLGNRVYWP 302
            Y  L  WS   GFS+N+ +      + +G        +VYWP
Sbjct: 385 GYNELGYWSNGLGFSENIHENSSYNTSMIGL------GQVYWP 421


>ref|XP_002327147.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222835462|gb|EEE73897.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 765

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   YDTLSTLAFALEKSSNRTTLLE---NILSSNFSGLSGQIKFTNGELSRSTTYEVVNVLGK 173
           YD    +A A+EKS  + T  E   NILSSNF GLSG ++F N  L +S +++++NV+G 
Sbjct: 231 YDATWAIARAMEKSQGKITSKELSGNILSSNFEGLSGTVRFENNVLWQSPSFQIINVVGN 290

Query: 174 KYIVLKSWSAEYGFSDNVIDKMVQVKNTVGAVMQVLGNRVYWP 302
            Y V+  WS ++GFS +   +      T  + ++ LG  VYWP
Sbjct: 291 SYRVMAVWSPKFGFSQS---EEKYNGATANSSLKNLG-PVYWP 329