BLASTX nr result

ID: Coptis21_contig00023208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023208
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28864.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002271314.1| PREDICTED: vacuolar protein 8 [Vitis vinifera]    110   2e-22
gb|AEE00747.1| armadillo repeat-containing protein [Gossypium hi...   105   4e-21
ref|XP_002321152.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_002885801.1| armadillo/beta-catenin repeat family protein...    99   6e-19

>emb|CBI28864.3| unnamed protein product [Vitis vinifera]
          Length = 256

 Score =  110 bits (274), Expect = 2e-22
 Identities = 60/115 (52%), Positives = 77/115 (66%)
 Frame = -3

Query: 346 TVKSFITKFQILRSKLTHLQTSLNQISDSTHWSEXXXXXXXXXXXXXXXXXXXXXXXQCQ 167
           +VKSFI ++Q+LRSKL+ LQ+S+ +ISDS HWSE                       QC 
Sbjct: 34  SVKSFIGRWQVLRSKLSSLQSSIVEISDSPHWSENPLFQTLIPSLVSTLQRLKSLSDQCA 93

Query: 166 NESSCYGKLRMQSDIDMATSSISAHSHDLDLLLKSGVLRHTNAIVLSQPGPLSSK 2
           + +   GKL MQSD+DMA++S+S   HDLDLLL+SGVLR +NAIVLSQPGP S+K
Sbjct: 94  DSAYAGGKLLMQSDLDMASASLSKQLHDLDLLLRSGVLRQSNAIVLSQPGPGSAK 148


>ref|XP_002271314.1| PREDICTED: vacuolar protein 8 [Vitis vinifera]
          Length = 569

 Score =  110 bits (274), Expect = 2e-22
 Identities = 60/115 (52%), Positives = 77/115 (66%)
 Frame = -3

Query: 346 TVKSFITKFQILRSKLTHLQTSLNQISDSTHWSEXXXXXXXXXXXXXXXXXXXXXXXQCQ 167
           +VKSFI ++Q+LRSKL+ LQ+S+ +ISDS HWSE                       QC 
Sbjct: 34  SVKSFIGRWQVLRSKLSSLQSSIVEISDSPHWSENPLFQTLIPSLVSTLQRLKSLSDQCA 93

Query: 166 NESSCYGKLRMQSDIDMATSSISAHSHDLDLLLKSGVLRHTNAIVLSQPGPLSSK 2
           + +   GKL MQSD+DMA++S+S   HDLDLLL+SGVLR +NAIVLSQPGP S+K
Sbjct: 94  DSAYAGGKLLMQSDLDMASASLSKQLHDLDLLLRSGVLRQSNAIVLSQPGPGSAK 148


>gb|AEE00747.1| armadillo repeat-containing protein [Gossypium hirsutum]
          Length = 570

 Score =  105 bits (263), Expect = 4e-21
 Identities = 58/115 (50%), Positives = 73/115 (63%)
 Frame = -3

Query: 346 TVKSFITKFQILRSKLTHLQTSLNQISDSTHWSEXXXXXXXXXXXXXXXXXXXXXXXQCQ 167
           TV+SF+ ++Q+LRSKL  LQ+SL+ IS+S HW++                       QC 
Sbjct: 39  TVRSFVGRWQVLRSKLCSLQSSLSSISESPHWNDNSLLHNLFPSLLSTLQRLKALSDQCT 98

Query: 166 NESSCYGKLRMQSDIDMATSSISAHSHDLDLLLKSGVLRHTNAIVLSQPGPLSSK 2
             S   GKL MQSD+DMA+SS+S H HDLDLLL+SGVL  +NAIVLS PGP S K
Sbjct: 99  LSSFTGGKLLMQSDLDMASSSLSNHLHDLDLLLRSGVLHQSNAIVLSHPGPGSDK 153


>ref|XP_002321152.1| predicted protein [Populus trichocarpa] gi|222861925|gb|EEE99467.1|
           predicted protein [Populus trichocarpa]
          Length = 566

 Score =  101 bits (252), Expect = 7e-20
 Identities = 57/116 (49%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
 Frame = -3

Query: 346 TVKSFITKFQILRSKLTHLQTSLNQISDSTHWSEXXXXXXXXXXXXXXXXXXXXXXXQCQ 167
           TV+SFI ++Q+LR+KLT LQ+SL+ +S+S  WS+                       QC 
Sbjct: 30  TVQSFIGRWQVLRTKLTSLQSSLSSLSESPLWSQNPLLHTLLPSLLSTLQRLLALSRQCS 89

Query: 166 NESSCYG-KLRMQSDIDMATSSISAHSHDLDLLLKSGVLRHTNAIVLSQPGPLSSK 2
           + SS  G KL  QSD+D+A+SS+S H HDLDLLL+SGVL H+NAI+LS PGP S K
Sbjct: 90  STSSLPGGKLLFQSDLDIASSSLSNHLHDLDLLLRSGVLHHSNAIILSHPGPGSDK 145


>ref|XP_002885801.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331641|gb|EFH62060.1|
           armadillo/beta-catenin repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 578

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 56/115 (48%), Positives = 70/115 (60%)
 Frame = -3

Query: 346 TVKSFITKFQILRSKLTHLQTSLNQISDSTHWSEXXXXXXXXXXXXXXXXXXXXXXXQCQ 167
           TV+SFI ++QILRSKL  L +SL+ +S+S HWS+                       QC 
Sbjct: 40  TVRSFIGRWQILRSKLFSLNSSLSSLSESPHWSQNPLLHTLLPSLLSNLQRLTSLSDQCS 99

Query: 166 NESSCYGKLRMQSDIDMATSSISAHSHDLDLLLKSGVLRHTNAIVLSQPGPLSSK 2
           + S   GKL MQSD+D+A+SS+S H  DLDLLL+SGVL   NAIVLS P P S K
Sbjct: 100 SASFSGGKLLMQSDLDIASSSLSTHISDLDLLLRSGVLHQQNAIVLSLPPPTSDK 154


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