BLASTX nr result

ID: Coptis21_contig00023203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023203
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523727.1| conserved hypothetical protein [Ricinus comm...    89   3e-16
ref|XP_002879111.1| predicted protein [Arabidopsis lyrata subsp....    84   1e-14
emb|CBI17132.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267...    84   1e-14
emb|CAN59835.1| hypothetical protein VITISV_017621 [Vitis vinifera]    83   3e-14

>ref|XP_002523727.1| conserved hypothetical protein [Ricinus communis]
           gi|223537031|gb|EEF38667.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1233

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 6/109 (5%)
 Frame = +1

Query: 88  NTPPPSLRVITRXXXXXXXXXXXXXXXXXHFS------EGVVVIGFIGKNEEEVTQLMNR 249
           N  PPS+RV+TR                          +GV+V+GFI  N +  +QL+NR
Sbjct: 5   NPNPPSVRVLTRPPTPAPSPDTQPLSSQSQTQLFPRSRDGVIVVGFISHNPDHSSQLINR 64

Query: 250 VLDDNVFGSGELDKRFNIEEGDGVVKDWFNFRKISYFYEEEKGLVFLLF 396
           VLD NVFGSG LDK  +I++ +  +KDWF +R+ISY+++EEKG +FL F
Sbjct: 65  VLDSNVFGSGHLDKLLSIDKEE--LKDWFKWRRISYYHDEEKGFLFLQF 111


>ref|XP_002879111.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324950|gb|EFH55370.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1189

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 37/74 (50%), Positives = 57/74 (77%)
 Frame = +1

Query: 181 SEGVVVIGFIGKNEEEVTQLMNRVLDDNVFGSGELDKRFNIEEGDGVVKDWFNFRKISYF 360
           S GVVV+GF+ +  ++ + L+N+VLD+NVFGSG+L+K   +++ D   +DWF FRKI Y+
Sbjct: 43  SNGVVVVGFLSRRPDDSSHLINQVLDNNVFGSGKLNKILTVDKPD--FQDWFRFRKICYY 100

Query: 361 YEEEKGLVFLLFVP 402
           +EE+KG+VF+ F P
Sbjct: 101 HEEDKGIVFVQFSP 114


>emb|CBI17132.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/75 (53%), Positives = 56/75 (74%)
 Frame = +1

Query: 181 SEGVVVIGFIGKNEEEVTQLMNRVLDDNVFGSGELDKRFNIEEGDGVVKDWFNFRKISYF 360
           SE VVV+GFIG+  ++V+ LMNR+LD N FGSG L+K   IE+ +  VK WF  R+ISY+
Sbjct: 57  SENVVVVGFIGRRPDDVSHLMNRILDLNAFGSGNLEKGLCIEKEE--VKGWFESRRISYY 114

Query: 361 YEEEKGLVFLLFVPT 405
           ++EEKG++FL +  T
Sbjct: 115 HDEEKGILFLQYCST 129


>ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267175 [Vitis vinifera]
          Length = 1226

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/75 (53%), Positives = 56/75 (74%)
 Frame = +1

Query: 181 SEGVVVIGFIGKNEEEVTQLMNRVLDDNVFGSGELDKRFNIEEGDGVVKDWFNFRKISYF 360
           SE VVV+GFIG+  ++V+ LMNR+LD N FGSG L+K   IE+ +  VK WF  R+ISY+
Sbjct: 48  SENVVVVGFIGRRPDDVSHLMNRILDLNAFGSGNLEKGLCIEKEE--VKGWFESRRISYY 105

Query: 361 YEEEKGLVFLLFVPT 405
           ++EEKG++FL +  T
Sbjct: 106 HDEEKGILFLQYCST 120


>emb|CAN59835.1| hypothetical protein VITISV_017621 [Vitis vinifera]
          Length = 177

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/75 (53%), Positives = 56/75 (74%)
 Frame = +1

Query: 181 SEGVVVIGFIGKNEEEVTQLMNRVLDDNVFGSGELDKRFNIEEGDGVVKDWFNFRKISYF 360
           SE VVV+GFIG+  ++V+ LMNR+LD N FGSG L+K   IE+ +  VK WF  R+ISY+
Sbjct: 48  SENVVVVGFIGRRPDDVSHLMNRLLDLNAFGSGNLEKGLCIEKEE--VKGWFEGRRISYY 105

Query: 361 YEEEKGLVFLLFVPT 405
           ++EEKG++FL +  T
Sbjct: 106 HDEEKGILFLQYCST 120


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