BLASTX nr result
ID: Coptis21_contig00023203
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023203 (406 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002523727.1| conserved hypothetical protein [Ricinus comm... 89 3e-16 ref|XP_002879111.1| predicted protein [Arabidopsis lyrata subsp.... 84 1e-14 emb|CBI17132.3| unnamed protein product [Vitis vinifera] 84 1e-14 ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267... 84 1e-14 emb|CAN59835.1| hypothetical protein VITISV_017621 [Vitis vinifera] 83 3e-14 >ref|XP_002523727.1| conserved hypothetical protein [Ricinus communis] gi|223537031|gb|EEF38667.1| conserved hypothetical protein [Ricinus communis] Length = 1233 Score = 89.4 bits (220), Expect = 3e-16 Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 6/109 (5%) Frame = +1 Query: 88 NTPPPSLRVITRXXXXXXXXXXXXXXXXXHFS------EGVVVIGFIGKNEEEVTQLMNR 249 N PPS+RV+TR +GV+V+GFI N + +QL+NR Sbjct: 5 NPNPPSVRVLTRPPTPAPSPDTQPLSSQSQTQLFPRSRDGVIVVGFISHNPDHSSQLINR 64 Query: 250 VLDDNVFGSGELDKRFNIEEGDGVVKDWFNFRKISYFYEEEKGLVFLLF 396 VLD NVFGSG LDK +I++ + +KDWF +R+ISY+++EEKG +FL F Sbjct: 65 VLDSNVFGSGHLDKLLSIDKEE--LKDWFKWRRISYYHDEEKGFLFLQF 111 >ref|XP_002879111.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297324950|gb|EFH55370.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 1189 Score = 84.0 bits (206), Expect = 1e-14 Identities = 37/74 (50%), Positives = 57/74 (77%) Frame = +1 Query: 181 SEGVVVIGFIGKNEEEVTQLMNRVLDDNVFGSGELDKRFNIEEGDGVVKDWFNFRKISYF 360 S GVVV+GF+ + ++ + L+N+VLD+NVFGSG+L+K +++ D +DWF FRKI Y+ Sbjct: 43 SNGVVVVGFLSRRPDDSSHLINQVLDNNVFGSGKLNKILTVDKPD--FQDWFRFRKICYY 100 Query: 361 YEEEKGLVFLLFVP 402 +EE+KG+VF+ F P Sbjct: 101 HEEDKGIVFVQFSP 114 >emb|CBI17132.3| unnamed protein product [Vitis vinifera] Length = 935 Score = 84.0 bits (206), Expect = 1e-14 Identities = 40/75 (53%), Positives = 56/75 (74%) Frame = +1 Query: 181 SEGVVVIGFIGKNEEEVTQLMNRVLDDNVFGSGELDKRFNIEEGDGVVKDWFNFRKISYF 360 SE VVV+GFIG+ ++V+ LMNR+LD N FGSG L+K IE+ + VK WF R+ISY+ Sbjct: 57 SENVVVVGFIGRRPDDVSHLMNRILDLNAFGSGNLEKGLCIEKEE--VKGWFESRRISYY 114 Query: 361 YEEEKGLVFLLFVPT 405 ++EEKG++FL + T Sbjct: 115 HDEEKGILFLQYCST 129 >ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267175 [Vitis vinifera] Length = 1226 Score = 84.0 bits (206), Expect = 1e-14 Identities = 40/75 (53%), Positives = 56/75 (74%) Frame = +1 Query: 181 SEGVVVIGFIGKNEEEVTQLMNRVLDDNVFGSGELDKRFNIEEGDGVVKDWFNFRKISYF 360 SE VVV+GFIG+ ++V+ LMNR+LD N FGSG L+K IE+ + VK WF R+ISY+ Sbjct: 48 SENVVVVGFIGRRPDDVSHLMNRILDLNAFGSGNLEKGLCIEKEE--VKGWFESRRISYY 105 Query: 361 YEEEKGLVFLLFVPT 405 ++EEKG++FL + T Sbjct: 106 HDEEKGILFLQYCST 120 >emb|CAN59835.1| hypothetical protein VITISV_017621 [Vitis vinifera] Length = 177 Score = 82.8 bits (203), Expect = 3e-14 Identities = 40/75 (53%), Positives = 56/75 (74%) Frame = +1 Query: 181 SEGVVVIGFIGKNEEEVTQLMNRVLDDNVFGSGELDKRFNIEEGDGVVKDWFNFRKISYF 360 SE VVV+GFIG+ ++V+ LMNR+LD N FGSG L+K IE+ + VK WF R+ISY+ Sbjct: 48 SENVVVVGFIGRRPDDVSHLMNRLLDLNAFGSGNLEKGLCIEKEE--VKGWFEGRRISYY 105 Query: 361 YEEEKGLVFLLFVPT 405 ++EEKG++FL + T Sbjct: 106 HDEEKGILFLQYCST 120