BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023196
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522932.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    68   7e-10
emb|CAN62294.1| hypothetical protein VITISV_019972 [Vitis vinifera]    63   2e-08
emb|CAN62025.1| hypothetical protein VITISV_006739 [Vitis vinifera]    62   4e-08
gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago ...    62   4e-08

>ref|XP_002522932.1| conserved hypothetical protein [Ricinus communis]
           gi|223537826|gb|EEF39443.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/74 (44%), Positives = 46/74 (62%)
 Frame = +1

Query: 7   RFPIFNMYIYKWPIFNMYIYKWPLAVRKECEMVMRNFLWSGSSGVRKGVTVKWDSCCKPQ 186
           R  + N  I+   +    +Y+WP ++ K  E  +RNFLW+GS   +K VTVKW  CCKP 
Sbjct: 176 RLALINSVIFASLLHTFMMYRWPSSLLKSIEKAIRNFLWTGSVSYKKLVTVKWGHCCKPI 235

Query: 187 DEGGLGLRRLKDVN 228
            EGG+GL+RL  +N
Sbjct: 236 SEGGIGLKRLDVLN 249


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/61 (50%), Positives = 37/61 (60%)
 Frame = +1

Query: 46  IFNMYIYKWPLAVRKECEMVMRNFLWSGSSGVRKGVTVKWDSCCKPQDEGGLGLRRLKDV 225
           I  + IY WP  + KE E   RNF+WSG    RK VTV W   CKPQ +GGLG+R L  +
Sbjct: 454 IHTITIYDWPSFLLKELETCFRNFIWSGDITKRKLVTVAWKKLCKPQSQGGLGIRSLSQL 513

Query: 226 N 228
           N
Sbjct: 514 N 514


>emb|CAN62294.1| hypothetical protein VITISV_019972 [Vitis vinifera]
          Length = 1851

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/74 (35%), Positives = 45/74 (60%)
 Frame = +1

Query: 7    RFPIFNMYIYKWPIFNMYIYKWPLAVRKECEMVMRNFLWSGSSGVRKGVTVKWDSCCKPQ 186
            R  +    +   PI++M +++ P +V +  + V R+FLW G S  RK   +KW++ C+ +
Sbjct: 1433 RITLIRSALASMPIYHMSLFRMPKSVARRLDKVQRDFLWGGGSAERKAHLIKWEAICEDK 1492

Query: 187  DEGGLGLRRLKDVN 228
             +GGLGLR+L  +N
Sbjct: 1493 SKGGLGLRKLVLLN 1506


>emb|CAN62025.1| hypothetical protein VITISV_006739 [Vitis vinifera]
          Length = 524

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/74 (35%), Positives = 45/74 (60%)
 Frame = +1

Query: 7   RFPIFNMYIYKWPIFNMYIYKWPLAVRKECEMVMRNFLWSGSSGVRKGVTVKWDSCCKPQ 186
           R  +    +   PI++M +++ P +V +  + V R+FLW G S  RK   +KW++ C+ +
Sbjct: 250 RITLIRSTLASMPIYHMSLFRMPKSVARRLDKVQRDFLWGGGSVERKAHLIKWEAICEDK 309

Query: 187 DEGGLGLRRLKDVN 228
            +GGLGLR+L  +N
Sbjct: 310 SKGGLGLRKLMLLN 323


>gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago truncatula]
          Length = 161

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 25/56 (44%), Positives = 37/56 (66%)
 Frame = +1

Query: 61  IYKWPLAVRKECEMVMRNFLWSGSSGVRKGVTVKWDSCCKPQDEGGLGLRRLKDVN 228
           +Y WP ++ K+ E  ++NF+WSG +  RK VTV W   C+P D+GGL +R L  +N
Sbjct: 94  VYNWPTSLLKDLEKSIKNFIWSGDTSKRKLVTVAWKKLCRPFDQGGLRIRSLIQLN 149