BLASTX nr result
ID: Coptis21_contig00023196
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023196 (377 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002522932.1| conserved hypothetical protein [Ricinus comm... 76 3e-12 gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas... 68 7e-10 emb|CAN62294.1| hypothetical protein VITISV_019972 [Vitis vinifera] 63 2e-08 emb|CAN62025.1| hypothetical protein VITISV_006739 [Vitis vinifera] 62 4e-08 gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago ... 62 4e-08 >ref|XP_002522932.1| conserved hypothetical protein [Ricinus communis] gi|223537826|gb|EEF39443.1| conserved hypothetical protein [Ricinus communis] Length = 303 Score = 75.9 bits (185), Expect = 3e-12 Identities = 33/74 (44%), Positives = 46/74 (62%) Frame = +1 Query: 7 RFPIFNMYIYKWPIFNMYIYKWPLAVRKECEMVMRNFLWSGSSGVRKGVTVKWDSCCKPQ 186 R + N I+ + +Y+WP ++ K E +RNFLW+GS +K VTVKW CCKP Sbjct: 176 RLALINSVIFASLLHTFMMYRWPSSLLKSIEKAIRNFLWTGSVSYKKLVTVKWGHCCKPI 235 Query: 187 DEGGLGLRRLKDVN 228 EGG+GL+RL +N Sbjct: 236 SEGGIGLKRLDVLN 249 >gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago truncatula] Length = 528 Score = 68.2 bits (165), Expect = 7e-10 Identities = 31/61 (50%), Positives = 37/61 (60%) Frame = +1 Query: 46 IFNMYIYKWPLAVRKECEMVMRNFLWSGSSGVRKGVTVKWDSCCKPQDEGGLGLRRLKDV 225 I + IY WP + KE E RNF+WSG RK VTV W CKPQ +GGLG+R L + Sbjct: 454 IHTITIYDWPSFLLKELETCFRNFIWSGDITKRKLVTVAWKKLCKPQSQGGLGIRSLSQL 513 Query: 226 N 228 N Sbjct: 514 N 514 >emb|CAN62294.1| hypothetical protein VITISV_019972 [Vitis vinifera] Length = 1851 Score = 63.2 bits (152), Expect = 2e-08 Identities = 26/74 (35%), Positives = 45/74 (60%) Frame = +1 Query: 7 RFPIFNMYIYKWPIFNMYIYKWPLAVRKECEMVMRNFLWSGSSGVRKGVTVKWDSCCKPQ 186 R + + PI++M +++ P +V + + V R+FLW G S RK +KW++ C+ + Sbjct: 1433 RITLIRSALASMPIYHMSLFRMPKSVARRLDKVQRDFLWGGGSAERKAHLIKWEAICEDK 1492 Query: 187 DEGGLGLRRLKDVN 228 +GGLGLR+L +N Sbjct: 1493 SKGGLGLRKLVLLN 1506 >emb|CAN62025.1| hypothetical protein VITISV_006739 [Vitis vinifera] Length = 524 Score = 62.4 bits (150), Expect = 4e-08 Identities = 26/74 (35%), Positives = 45/74 (60%) Frame = +1 Query: 7 RFPIFNMYIYKWPIFNMYIYKWPLAVRKECEMVMRNFLWSGSSGVRKGVTVKWDSCCKPQ 186 R + + PI++M +++ P +V + + V R+FLW G S RK +KW++ C+ + Sbjct: 250 RITLIRSTLASMPIYHMSLFRMPKSVARRLDKVQRDFLWGGGSVERKAHLIKWEAICEDK 309 Query: 187 DEGGLGLRRLKDVN 228 +GGLGLR+L +N Sbjct: 310 SKGGLGLRKLMLLN 323 >gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago truncatula] Length = 161 Score = 62.4 bits (150), Expect = 4e-08 Identities = 25/56 (44%), Positives = 37/56 (66%) Frame = +1 Query: 61 IYKWPLAVRKECEMVMRNFLWSGSSGVRKGVTVKWDSCCKPQDEGGLGLRRLKDVN 228 +Y WP ++ K+ E ++NF+WSG + RK VTV W C+P D+GGL +R L +N Sbjct: 94 VYNWPTSLLKDLEKSIKNFIWSGDTSKRKLVTVAWKKLCRPFDQGGLRIRSLIQLN 149