BLASTX nr result

ID: Coptis21_contig00023187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023187
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299351.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002269943.2| PREDICTED: uncharacterized protein LOC100267...   123   1e-26
ref|XP_002512665.1| conserved hypothetical protein [Ricinus comm...   123   1e-26
ref|XP_003556587.1| PREDICTED: uncharacterized protein LOC100779...   122   2e-26
ref|XP_002303748.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26

>ref|XP_002299351.1| predicted protein [Populus trichocarpa] gi|222846609|gb|EEE84156.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/86 (74%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
 Frame = +1

Query: 118 TNGVD-----GSDDVNKAPRLPRWTRHEILVLIEGKRVAENQVRRVRT---GNGSNQSEP 273
           TNGVD     G DD NKAPRLPRWTR EILVLI+GKRVAEN+VRR R    G GS Q EP
Sbjct: 21  TNGVDTNIRDGGDDGNKAPRLPRWTRQEILVLIQGKRVAENRVRRGRASGMGIGSGQIEP 80

Query: 274 KWVSISSYCKRHGVSREPVQCRKRWS 351
           KW S+SSYCKRHGV+R PVQCRKRWS
Sbjct: 81  KWASVSSYCKRHGVNRGPVQCRKRWS 106


>ref|XP_002269943.2| PREDICTED: uncharacterized protein LOC100267783 [Vitis vinifera]
          Length = 340

 Score =  123 bits (309), Expect = 1e-26
 Identities = 64/101 (63%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
 Frame = +1

Query: 61  ELTMTSPEKEPTPPQVVAVTNGVDGS-DDVNKAPRLPRWTRHEILVLIEGKRVAENQVRR 237
           EL   S    P      AV NGV+ + DD ++APRLPRWTR EILVLI+GK+VAE++VRR
Sbjct: 2   ELERLSLAPAPVDDDADAVPNGVNAAGDDGSRAPRLPRWTRQEILVLIQGKKVAESRVRR 61

Query: 238 VRTGN---GSNQSEPKWVSISSYCKRHGVSREPVQCRKRWS 351
            RTG    GS Q EPKW S+SSYCKRHGV+R PVQCRKRWS
Sbjct: 62  GRTGGLAFGSAQIEPKWASVSSYCKRHGVNRGPVQCRKRWS 102


>ref|XP_002512665.1| conserved hypothetical protein [Ricinus communis]
           gi|223548626|gb|EEF50117.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 347

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/105 (58%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
 Frame = +1

Query: 46  LRYRYELTMTSPEKEPTPPQVVAVTNGVDGSDDVNKAPRLPRWTRHEILVLIEGKRVAEN 225
           L+ ++ LT  + + + T          +DG+DD +K PRLPRWTR EILVLI+GK+VAEN
Sbjct: 3   LQQQFNLTSNTVDGDTTNGVDNTRPASIDGADDGSKTPRLPRWTRQEILVLIQGKKVAEN 62

Query: 226 QVRRVRTGN---GSNQSEPKWVSISSYCKRHGVSREPVQCRKRWS 351
           +VRR RT     GS Q EPKW S+SSYCKRHGV+R PVQCRKRWS
Sbjct: 63  RVRRGRTAGMAFGSGQVEPKWASVSSYCKRHGVNRGPVQCRKRWS 107


>ref|XP_003556587.1| PREDICTED: uncharacterized protein LOC100779050 [Glycine max]
          Length = 319

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 3/81 (3%)
 Frame = +1

Query: 118 TNGVDGSDDVNKAPRLPRWTRHEILVLIEGKRVAENQVRRVRTGN---GSNQSEPKWVSI 288
           TNGVDG D+  KAPRLPRWTR EILVLI+GKR AEN+ RR RT     GS Q EPKW S+
Sbjct: 13  TNGVDGGDEGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLAFGSGQVEPKWASV 72

Query: 289 SSYCKRHGVSREPVQCRKRWS 351
           SSYC++HGV+R PVQCRKRWS
Sbjct: 73  SSYCRKHGVNRGPVQCRKRWS 93


>ref|XP_002303748.1| predicted protein [Populus trichocarpa] gi|222841180|gb|EEE78727.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/86 (70%), Positives = 67/86 (77%), Gaps = 8/86 (9%)
 Frame = +1

Query: 118 TNGVD-----GSDDVNKAPRLPRWTRHEILVLIEGKRVAENQVRRVRT---GNGSNQSEP 273
           TNGVD     G DD NKAPRLPRWTR EILVLI+GKRVAEN+VRR R    G G  Q EP
Sbjct: 21  TNGVDTSIRDGGDDGNKAPRLPRWTRQEILVLIQGKRVAENRVRRGRASGMGIGPGQVEP 80

Query: 274 KWVSISSYCKRHGVSREPVQCRKRWS 351
           KW S+S+YCK+HGV+R PVQCRKRWS
Sbjct: 81  KWASVSTYCKKHGVNRGPVQCRKRWS 106


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