BLASTX nr result
ID: Coptis21_contig00023165
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023165 (419 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310151.1| predicted protein [Populus trichocarpa] gi|2... 64 2e-08 ref|XP_002277444.1| PREDICTED: uncharacterized membrane protein ... 60 2e-07 ref|XP_002866972.1| hypothetical protein ARALYDRAFT_912643 [Arab... 58 9e-07 gb|AAU44535.1| hypothetical protein AT4G37030 [Arabidopsis thali... 55 6e-06 gb|AAU44534.1| hypothetical protein AT4G37030 [Arabidopsis thali... 55 6e-06 >ref|XP_002310151.1| predicted protein [Populus trichocarpa] gi|222853054|gb|EEE90601.1| predicted protein [Populus trichocarpa] Length = 570 Score = 63.5 bits (153), Expect = 2e-08 Identities = 30/51 (58%), Positives = 41/51 (80%) Frame = -1 Query: 419 RLTGMTRNISMIPTYRRKYQQVVKDLISYSLEKEGSSKTNSMRSVASVDAV 267 R+ GM R IS PTYRR+++QVVK LI+Y EKEG ++++SMRSVAS++ V Sbjct: 520 RMIGMIRGISKFPTYRRRFRQVVKALIAYYAEKEGVTRSSSMRSVASIENV 570 >ref|XP_002277444.1| PREDICTED: uncharacterized membrane protein At3g27390 [Vitis vinifera] gi|296082433|emb|CBI21438.3| unnamed protein product [Vitis vinifera] Length = 559 Score = 60.1 bits (144), Expect = 2e-07 Identities = 26/48 (54%), Positives = 40/48 (83%) Frame = -1 Query: 419 RLTGMTRNISMIPTYRRKYQQVVKDLISYSLEKEGSSKTNSMRSVASV 276 R+ G+ R++S +PTYRRK++ VVK LI+YS EK+G+ +++S RSVAS+ Sbjct: 512 RMIGIVRSVSKLPTYRRKFRNVVKALIAYSFEKDGTIRSSSARSVASI 559 >ref|XP_002866972.1| hypothetical protein ARALYDRAFT_912643 [Arabidopsis lyrata subsp. lyrata] gi|297312808|gb|EFH43231.1| hypothetical protein ARALYDRAFT_912643 [Arabidopsis lyrata subsp. lyrata] Length = 569 Score = 57.8 bits (138), Expect = 9e-07 Identities = 26/51 (50%), Positives = 39/51 (76%) Frame = -1 Query: 419 RLTGMTRNISMIPTYRRKYQQVVKDLISYSLEKEGSSKTNSMRSVASVDAV 267 R+ GM R++S +PTYRR+++QVVK LI+Y LEK+G ++T SM S ++ V Sbjct: 519 RMMGMVRSVSKLPTYRRRFRQVVKALITYHLEKQGLNRTGSMSSGDFIEEV 569 >gb|AAU44535.1| hypothetical protein AT4G37030 [Arabidopsis thaliana] gi|52354431|gb|AAU44536.1| hypothetical protein AT4G37030 [Arabidopsis thaliana] Length = 255 Score = 55.1 bits (131), Expect = 6e-06 Identities = 24/44 (54%), Positives = 35/44 (79%) Frame = -1 Query: 419 RLTGMTRNISMIPTYRRKYQQVVKDLISYSLEKEGSSKTNSMRS 288 R+ GM R++S +PTYRR+++QVVK LI+Y EK+G ++T SM S Sbjct: 205 RMMGMVRSVSKLPTYRRRFRQVVKALITYYSEKQGLNRTGSMNS 248 >gb|AAU44534.1| hypothetical protein AT4G37030 [Arabidopsis thaliana] Length = 569 Score = 55.1 bits (131), Expect = 6e-06 Identities = 24/44 (54%), Positives = 35/44 (79%) Frame = -1 Query: 419 RLTGMTRNISMIPTYRRKYQQVVKDLISYSLEKEGSSKTNSMRS 288 R+ GM R++S +PTYRR+++QVVK LI+Y EK+G ++T SM S Sbjct: 519 RMMGMVRSVSKLPTYRRRFRQVVKALITYYSEKQGLNRTGSMNS 562