BLASTX nr result

ID: Coptis21_contig00023165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023165
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310151.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002277444.1| PREDICTED: uncharacterized membrane protein ...    60   2e-07
ref|XP_002866972.1| hypothetical protein ARALYDRAFT_912643 [Arab...    58   9e-07
gb|AAU44535.1| hypothetical protein AT4G37030 [Arabidopsis thali...    55   6e-06
gb|AAU44534.1| hypothetical protein AT4G37030 [Arabidopsis thali...    55   6e-06

>ref|XP_002310151.1| predicted protein [Populus trichocarpa] gi|222853054|gb|EEE90601.1|
           predicted protein [Populus trichocarpa]
          Length = 570

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/51 (58%), Positives = 41/51 (80%)
 Frame = -1

Query: 419 RLTGMTRNISMIPTYRRKYQQVVKDLISYSLEKEGSSKTNSMRSVASVDAV 267
           R+ GM R IS  PTYRR+++QVVK LI+Y  EKEG ++++SMRSVAS++ V
Sbjct: 520 RMIGMIRGISKFPTYRRRFRQVVKALIAYYAEKEGVTRSSSMRSVASIENV 570


>ref|XP_002277444.1| PREDICTED: uncharacterized membrane protein At3g27390 [Vitis
           vinifera] gi|296082433|emb|CBI21438.3| unnamed protein
           product [Vitis vinifera]
          Length = 559

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/48 (54%), Positives = 40/48 (83%)
 Frame = -1

Query: 419 RLTGMTRNISMIPTYRRKYQQVVKDLISYSLEKEGSSKTNSMRSVASV 276
           R+ G+ R++S +PTYRRK++ VVK LI+YS EK+G+ +++S RSVAS+
Sbjct: 512 RMIGIVRSVSKLPTYRRKFRNVVKALIAYSFEKDGTIRSSSARSVASI 559


>ref|XP_002866972.1| hypothetical protein ARALYDRAFT_912643 [Arabidopsis lyrata subsp.
           lyrata] gi|297312808|gb|EFH43231.1| hypothetical protein
           ARALYDRAFT_912643 [Arabidopsis lyrata subsp. lyrata]
          Length = 569

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/51 (50%), Positives = 39/51 (76%)
 Frame = -1

Query: 419 RLTGMTRNISMIPTYRRKYQQVVKDLISYSLEKEGSSKTNSMRSVASVDAV 267
           R+ GM R++S +PTYRR+++QVVK LI+Y LEK+G ++T SM S   ++ V
Sbjct: 519 RMMGMVRSVSKLPTYRRRFRQVVKALITYHLEKQGLNRTGSMSSGDFIEEV 569


>gb|AAU44535.1| hypothetical protein AT4G37030 [Arabidopsis thaliana]
           gi|52354431|gb|AAU44536.1| hypothetical protein
           AT4G37030 [Arabidopsis thaliana]
          Length = 255

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = -1

Query: 419 RLTGMTRNISMIPTYRRKYQQVVKDLISYSLEKEGSSKTNSMRS 288
           R+ GM R++S +PTYRR+++QVVK LI+Y  EK+G ++T SM S
Sbjct: 205 RMMGMVRSVSKLPTYRRRFRQVVKALITYYSEKQGLNRTGSMNS 248


>gb|AAU44534.1| hypothetical protein AT4G37030 [Arabidopsis thaliana]
          Length = 569

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = -1

Query: 419 RLTGMTRNISMIPTYRRKYQQVVKDLISYSLEKEGSSKTNSMRS 288
           R+ GM R++S +PTYRR+++QVVK LI+Y  EK+G ++T SM S
Sbjct: 519 RMMGMVRSVSKLPTYRRRFRQVVKALITYYSEKQGLNRTGSMNS 562


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