BLASTX nr result

ID: Coptis21_contig00023153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023153
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518064.1| conserved hypothetical protein [Ricinus comm...   180   9e-44
emb|CBI18339.3| unnamed protein product [Vitis vinifera]              177   1e-42
ref|XP_002268871.1| PREDICTED: DUF246 domain-containing protein ...   177   1e-42
ref|XP_002298687.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
emb|CBI17217.3| unnamed protein product [Vitis vinifera]              174   9e-42

>ref|XP_002518064.1| conserved hypothetical protein [Ricinus communis]
           gi|223542660|gb|EEF44197.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 518

 Score =  180 bits (457), Expect = 9e-44
 Identities = 87/96 (90%), Positives = 93/96 (96%)
 Frame = -2

Query: 290 NGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFKGIYDVDHFI 111
           NGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGF GIYDV+HFI
Sbjct: 86  NGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFHGIYDVEHFI 145

Query: 110 KSLRYDVRIVESLPEIRSNGKTKKKMKAYQLRPPRD 3
           +SL+YDVRIVES+PEIR NGKT KK+KA+QLRPPRD
Sbjct: 146 QSLKYDVRIVESIPEIRKNGKT-KKIKAFQLRPPRD 180


>emb|CBI18339.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/96 (89%), Positives = 90/96 (93%)
 Frame = -2

Query: 290 NGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFKGIYDVDHFI 111
           NGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDAN+FWHD SGF+GIYDV+HFI
Sbjct: 92  NGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANAFWHDHSGFEGIYDVEHFI 151

Query: 110 KSLRYDVRIVESLPEIRSNGKTKKKMKAYQLRPPRD 3
           KSLRYDVRIVE LPEI  NGKT KK+K YQLRPPRD
Sbjct: 152 KSLRYDVRIVEKLPEITKNGKT-KKIKGYQLRPPRD 186


>ref|XP_002268871.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
           vinifera]
          Length = 529

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/96 (89%), Positives = 90/96 (93%)
 Frame = -2

Query: 290 NGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFKGIYDVDHFI 111
           NGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDAN+FWHD SGF+GIYDV+HFI
Sbjct: 101 NGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANAFWHDHSGFEGIYDVEHFI 160

Query: 110 KSLRYDVRIVESLPEIRSNGKTKKKMKAYQLRPPRD 3
           KSLRYDVRIVE LPEI  NGKT KK+K YQLRPPRD
Sbjct: 161 KSLRYDVRIVEKLPEITKNGKT-KKIKGYQLRPPRD 195


>ref|XP_002298687.1| predicted protein [Populus trichocarpa] gi|222845945|gb|EEE83492.1|
           predicted protein [Populus trichocarpa]
          Length = 522

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/95 (89%), Positives = 91/95 (95%)
 Frame = -2

Query: 287 GYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFKGIYDVDHFIK 108
           GYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGF GIYDV+HFI+
Sbjct: 92  GYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFHGIYDVEHFIQ 151

Query: 107 SLRYDVRIVESLPEIRSNGKTKKKMKAYQLRPPRD 3
           SLR+DVRIVE +PEIR NGKT KK+KA+QLRPPRD
Sbjct: 152 SLRFDVRIVERIPEIRKNGKT-KKIKAFQLRPPRD 185


>emb|CBI17217.3| unnamed protein product [Vitis vinifera]
          Length = 564

 Score =  174 bits (440), Expect = 9e-42
 Identities = 84/96 (87%), Positives = 90/96 (93%)
 Frame = -2

Query: 290 NGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFKGIYDVDHFI 111
           NGYLRVRCNGGLNQQR+AICNAVLAARIMNATLVLPELDANSFWHD SGF+GIYDV+HFI
Sbjct: 131 NGYLRVRCNGGLNQQRTAICNAVLAARIMNATLVLPELDANSFWHDSSGFQGIYDVEHFI 190

Query: 110 KSLRYDVRIVESLPEIRSNGKTKKKMKAYQLRPPRD 3
             LR+DVRIVES+PE R NGKT KK+KAYQLRPPRD
Sbjct: 191 AVLRFDVRIVESIPETRKNGKT-KKIKAYQLRPPRD 225


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