BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023142
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003077950.1| U2 snRNP auxiliary factor, large subunit (IS...    54   1e-05

>ref|XP_003077950.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
           gi|116056401|emb|CAL52690.1| U2 snRNP auxiliary factor,
           large subunit (ISS) [Ostreococcus tauri]
          Length = 388

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = +3

Query: 36  TSQVSGHARRFCIGDLPSDANEQEILNLFQDKIKSVGG-SNHSAVILNVYINRRKKY 203
           T+Q + HARR  +G  P+ ANEQE+ + F D + +VGG ++  A ++NVYIN  KK+
Sbjct: 50  TAQTTRHARRIYLGGCPTMANEQELSSFFNDALVAVGGTTSEEAPVVNVYINLEKKF 106