BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023126
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78364.1| hypothetical protein VITISV_028668 [Vitis vinifera]   285   4e-75
ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containi...   283   2e-74
ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containi...   281   6e-74
emb|CBI25159.3| unnamed protein product [Vitis vinifera]              273   2e-71
emb|CBI20033.3| unnamed protein product [Vitis vinifera]              273   2e-71

>emb|CAN78364.1| hypothetical protein VITISV_028668 [Vitis vinifera]
          Length = 488

 Score =  285 bits (730), Expect = 4e-75
 Identities = 139/222 (62%), Positives = 174/222 (78%)
 Frame = -2

Query: 670 ALIAFDSMRALIDGKPSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLI 491
           A IAF SMR +IDGKPSV +YNILING+ K R+H++ + +Y +M+KDRVKPDV+TFN+LI
Sbjct: 68  AEIAFASMRRMIDGKPSVAMYNILINGYVKCREHEKVMTVYEKMIKDRVKPDVFTFNSLI 127

Query: 490 SSFCRNSQFQLALEMFKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFD 311
           SS CRNSQF LALEMFKEM+ KGC+PN+VSFNTLI G F+ +K EEGIGMAYEML++G +
Sbjct: 128 SSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRDRKFEEGIGMAYEMLELGCE 187

Query: 310 FSVATCEILIDGLLREGRVSKACDLLTDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQL 131
           FS  TCEIL+DGL REGRV +ACDLL     KGA+P+GFD   ++E LC +  ++R L+L
Sbjct: 188 FSNVTCEILVDGLCREGRVLEACDLLIYFSGKGALPNGFDYFCLIEALCGEENVDRALEL 247

Query: 130 VDELLAKGIPLGPIACSTLIEGLRHAGKTAEAVTFTERMLKE 5
           +D+L  KG     IAC+TLIEGLR  GKT EA    E+ML+E
Sbjct: 248 LDQLWRKGNAPSSIACTTLIEGLRRFGKTEEAFQLMEKMLRE 289


>ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Vitis vinifera]
          Length = 480

 Score =  283 bits (724), Expect = 2e-74
 Identities = 137/222 (61%), Positives = 175/222 (78%)
 Frame = -2

Query: 670 ALIAFDSMRALIDGKPSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLI 491
           A IAF SMR +IDGKPSV ++NILING+ K R+H++ + +Y +M+KDRVKPDV+TFN+LI
Sbjct: 163 AEIAFASMRRMIDGKPSVAMHNILINGYVKCREHEKVMTVYEKMIKDRVKPDVFTFNSLI 222

Query: 490 SSFCRNSQFQLALEMFKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFD 311
           SS CRNSQF LALEMFKEM+ KGC+PN+VSFNTLI G F+++K EEG+GMAYEML++G +
Sbjct: 223 SSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGVGMAYEMLELGCE 282

Query: 310 FSVATCEILIDGLLREGRVSKACDLLTDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQL 131
           FS  TCEIL+DGL REGRV +A DLL D   KGA+P+GFD   ++E LC +  ++R L+L
Sbjct: 283 FSNVTCEILVDGLCREGRVLEAFDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALEL 342

Query: 130 VDELLAKGIPLGPIACSTLIEGLRHAGKTAEAVTFTERMLKE 5
           +D+L  KG     IAC+TLIEGLR  GKT EA    E+ML+E
Sbjct: 343 LDQLWRKGNAPSSIACTTLIEGLRRFGKTEEAFQLMEKMLRE 384


>ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Vitis vinifera]
          Length = 588

 Score =  281 bits (720), Expect = 6e-74
 Identities = 135/222 (60%), Positives = 173/222 (77%)
 Frame = -2

Query: 670 ALIAFDSMRALIDGKPSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLI 491
           A I+F+SMR +IDGKPSV +YNILING+   R+H++ + +Y +M+KDRVKPDV+TFN+LI
Sbjct: 271 AEISFESMRRMIDGKPSVAMYNILINGYVNCREHEKVMTVYEKMIKDRVKPDVFTFNSLI 330

Query: 490 SSFCRNSQFQLALEMFKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFD 311
           SS CRNSQF LALEMFKEM+ KGC+PN+VSFNTLI G F+++K EEGIGMAYEML++G +
Sbjct: 331 SSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGIGMAYEMLELGCE 390

Query: 310 FSVATCEILIDGLLREGRVSKACDLLTDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQL 131
           FS  TCEIL+DGL REGRV +ACDLL D   KGA+P+GFD   ++E LC +  ++R L+L
Sbjct: 391 FSNVTCEILVDGLCREGRVLEACDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALEL 450

Query: 130 VDELLAKGIPLGPIACSTLIEGLRHAGKTAEAVTFTERMLKE 5
           +D+L  KG     IAC+  IEGLR   KT EA    E+ML+E
Sbjct: 451 LDQLWRKGNAPSSIACTAFIEGLRRFRKTEEAFQLMEKMLRE 492



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 39/122 (31%), Positives = 66/122 (54%)
 Frame = -2

Query: 625 PSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLISSFCRNSQFQLALEM 446
           PS +     I G  +FRK + A +L  +M+++ + PD  T N L+   C   +   A E+
Sbjct: 461 PSSIACTAFIEGLRRFRKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANEL 520

Query: 445 FKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFDFSVATCEILIDGLLR 266
                SKG + + ++FN L+ G+ ++ K +EG  +  EMLD+GF   +A+   L++GL  
Sbjct: 521 RLLASSKGLDSDGMTFNILVNGYSREGKRKEGKRLLNEMLDLGFIPDLASYNRLMNGLSN 580

Query: 265 EG 260
            G
Sbjct: 581 GG 582


>emb|CBI25159.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  273 bits (698), Expect = 2e-71
 Identities = 130/217 (59%), Positives = 168/217 (77%)
 Frame = -2

Query: 655 DSMRALIDGKPSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLISSFCR 476
           D + ++IDGKPSV +YNILING+   R+H++ + +Y +M+KDRVKPDV+TFN+LISS CR
Sbjct: 243 DGIFSMIDGKPSVAMYNILINGYVNCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCR 302

Query: 475 NSQFQLALEMFKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFDFSVAT 296
           NSQF LALEMFKEM+ KGC+PN+VSFNTLI G F+++K EEGIGMAYEML++G +FS  T
Sbjct: 303 NSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGIGMAYEMLELGCEFSNVT 362

Query: 295 CEILIDGLLREGRVSKACDLLTDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQLVDELL 116
           CEIL+DGL REGRV +ACDLL D   KGA+P+GFD   ++E LC +  ++R L+L+D+L 
Sbjct: 363 CEILVDGLCREGRVLEACDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALELLDQLW 422

Query: 115 AKGIPLGPIACSTLIEGLRHAGKTAEAVTFTERMLKE 5
            KG     IAC+  IEGLR   KT EA    E+ML+E
Sbjct: 423 RKGNAPSSIACTAFIEGLRRFRKTEEAFQLMEKMLRE 459



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 39/122 (31%), Positives = 66/122 (54%)
 Frame = -2

Query: 625 PSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLISSFCRNSQFQLALEM 446
           PS +     I G  +FRK + A +L  +M+++ + PD  T N L+   C   +   A E+
Sbjct: 428 PSSIACTAFIEGLRRFRKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANEL 487

Query: 445 FKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFDFSVATCEILIDGLLR 266
                SKG + + ++FN L+ G+ ++ K +EG  +  EMLD+GF   +A+   L++GL  
Sbjct: 488 RLLASSKGLDSDGMTFNILVNGYSREGKRKEGKRLLNEMLDLGFIPDLASYNRLMNGLSN 547

Query: 265 EG 260
            G
Sbjct: 548 GG 549


>emb|CBI20033.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  273 bits (698), Expect = 2e-71
 Identities = 130/212 (61%), Positives = 168/212 (79%)
 Frame = -2

Query: 640 LIDGKPSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLISSFCRNSQFQ 461
           +IDGKPSV ++NILING+ K R+H++ + +Y +M+KDRVKPDV+TFN+LISS CRNSQF 
Sbjct: 174 MIDGKPSVAMHNILINGYVKCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFG 233

Query: 460 LALEMFKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFDFSVATCEILI 281
           LALEMFKEM+ KGC+PN+VSFNTLI G F+++K EEG+GMAYEML++G +FS  TCEIL+
Sbjct: 234 LALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGVGMAYEMLELGCEFSNVTCEILV 293

Query: 280 DGLLREGRVSKACDLLTDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQLVDELLAKGIP 101
           DGL REGRV +A DLL D   KGA+P+GFD   ++E LC +  ++R L+L+D+L  KG  
Sbjct: 294 DGLCREGRVLEAFDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALELLDQLWRKGNA 353

Query: 100 LGPIACSTLIEGLRHAGKTAEAVTFTERMLKE 5
              IAC+TLIEGLR  GKT EA    E+ML+E
Sbjct: 354 PSSIACTTLIEGLRRFGKTEEAFQLMEKMLRE 385