BLASTX nr result
ID: Coptis21_contig00023126
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023126 (671 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN78364.1| hypothetical protein VITISV_028668 [Vitis vinifera] 285 4e-75 ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containi... 283 2e-74 ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containi... 281 6e-74 emb|CBI25159.3| unnamed protein product [Vitis vinifera] 273 2e-71 emb|CBI20033.3| unnamed protein product [Vitis vinifera] 273 2e-71 >emb|CAN78364.1| hypothetical protein VITISV_028668 [Vitis vinifera] Length = 488 Score = 285 bits (730), Expect = 4e-75 Identities = 139/222 (62%), Positives = 174/222 (78%) Frame = -2 Query: 670 ALIAFDSMRALIDGKPSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLI 491 A IAF SMR +IDGKPSV +YNILING+ K R+H++ + +Y +M+KDRVKPDV+TFN+LI Sbjct: 68 AEIAFASMRRMIDGKPSVAMYNILINGYVKCREHEKVMTVYEKMIKDRVKPDVFTFNSLI 127 Query: 490 SSFCRNSQFQLALEMFKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFD 311 SS CRNSQF LALEMFKEM+ KGC+PN+VSFNTLI G F+ +K EEGIGMAYEML++G + Sbjct: 128 SSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRDRKFEEGIGMAYEMLELGCE 187 Query: 310 FSVATCEILIDGLLREGRVSKACDLLTDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQL 131 FS TCEIL+DGL REGRV +ACDLL KGA+P+GFD ++E LC + ++R L+L Sbjct: 188 FSNVTCEILVDGLCREGRVLEACDLLIYFSGKGALPNGFDYFCLIEALCGEENVDRALEL 247 Query: 130 VDELLAKGIPLGPIACSTLIEGLRHAGKTAEAVTFTERMLKE 5 +D+L KG IAC+TLIEGLR GKT EA E+ML+E Sbjct: 248 LDQLWRKGNAPSSIACTTLIEGLRRFGKTEEAFQLMEKMLRE 289 >ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240-like [Vitis vinifera] Length = 480 Score = 283 bits (724), Expect = 2e-74 Identities = 137/222 (61%), Positives = 175/222 (78%) Frame = -2 Query: 670 ALIAFDSMRALIDGKPSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLI 491 A IAF SMR +IDGKPSV ++NILING+ K R+H++ + +Y +M+KDRVKPDV+TFN+LI Sbjct: 163 AEIAFASMRRMIDGKPSVAMHNILINGYVKCREHEKVMTVYEKMIKDRVKPDVFTFNSLI 222 Query: 490 SSFCRNSQFQLALEMFKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFD 311 SS CRNSQF LALEMFKEM+ KGC+PN+VSFNTLI G F+++K EEG+GMAYEML++G + Sbjct: 223 SSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGVGMAYEMLELGCE 282 Query: 310 FSVATCEILIDGLLREGRVSKACDLLTDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQL 131 FS TCEIL+DGL REGRV +A DLL D KGA+P+GFD ++E LC + ++R L+L Sbjct: 283 FSNVTCEILVDGLCREGRVLEAFDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALEL 342 Query: 130 VDELLAKGIPLGPIACSTLIEGLRHAGKTAEAVTFTERMLKE 5 +D+L KG IAC+TLIEGLR GKT EA E+ML+E Sbjct: 343 LDQLWRKGNAPSSIACTTLIEGLRRFGKTEEAFQLMEKMLRE 384 >ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240-like [Vitis vinifera] Length = 588 Score = 281 bits (720), Expect = 6e-74 Identities = 135/222 (60%), Positives = 173/222 (77%) Frame = -2 Query: 670 ALIAFDSMRALIDGKPSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLI 491 A I+F+SMR +IDGKPSV +YNILING+ R+H++ + +Y +M+KDRVKPDV+TFN+LI Sbjct: 271 AEISFESMRRMIDGKPSVAMYNILINGYVNCREHEKVMTVYEKMIKDRVKPDVFTFNSLI 330 Query: 490 SSFCRNSQFQLALEMFKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFD 311 SS CRNSQF LALEMFKEM+ KGC+PN+VSFNTLI G F+++K EEGIGMAYEML++G + Sbjct: 331 SSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGIGMAYEMLELGCE 390 Query: 310 FSVATCEILIDGLLREGRVSKACDLLTDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQL 131 FS TCEIL+DGL REGRV +ACDLL D KGA+P+GFD ++E LC + ++R L+L Sbjct: 391 FSNVTCEILVDGLCREGRVLEACDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALEL 450 Query: 130 VDELLAKGIPLGPIACSTLIEGLRHAGKTAEAVTFTERMLKE 5 +D+L KG IAC+ IEGLR KT EA E+ML+E Sbjct: 451 LDQLWRKGNAPSSIACTAFIEGLRRFRKTEEAFQLMEKMLRE 492 Score = 68.6 bits (166), Expect = 1e-09 Identities = 39/122 (31%), Positives = 66/122 (54%) Frame = -2 Query: 625 PSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLISSFCRNSQFQLALEM 446 PS + I G +FRK + A +L +M+++ + PD T N L+ C + A E+ Sbjct: 461 PSSIACTAFIEGLRRFRKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANEL 520 Query: 445 FKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFDFSVATCEILIDGLLR 266 SKG + + ++FN L+ G+ ++ K +EG + EMLD+GF +A+ L++GL Sbjct: 521 RLLASSKGLDSDGMTFNILVNGYSREGKRKEGKRLLNEMLDLGFIPDLASYNRLMNGLSN 580 Query: 265 EG 260 G Sbjct: 581 GG 582 >emb|CBI25159.3| unnamed protein product [Vitis vinifera] Length = 605 Score = 273 bits (698), Expect = 2e-71 Identities = 130/217 (59%), Positives = 168/217 (77%) Frame = -2 Query: 655 DSMRALIDGKPSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLISSFCR 476 D + ++IDGKPSV +YNILING+ R+H++ + +Y +M+KDRVKPDV+TFN+LISS CR Sbjct: 243 DGIFSMIDGKPSVAMYNILINGYVNCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCR 302 Query: 475 NSQFQLALEMFKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFDFSVAT 296 NSQF LALEMFKEM+ KGC+PN+VSFNTLI G F+++K EEGIGMAYEML++G +FS T Sbjct: 303 NSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGIGMAYEMLELGCEFSNVT 362 Query: 295 CEILIDGLLREGRVSKACDLLTDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQLVDELL 116 CEIL+DGL REGRV +ACDLL D KGA+P+GFD ++E LC + ++R L+L+D+L Sbjct: 363 CEILVDGLCREGRVLEACDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALELLDQLW 422 Query: 115 AKGIPLGPIACSTLIEGLRHAGKTAEAVTFTERMLKE 5 KG IAC+ IEGLR KT EA E+ML+E Sbjct: 423 RKGNAPSSIACTAFIEGLRRFRKTEEAFQLMEKMLRE 459 Score = 68.6 bits (166), Expect = 1e-09 Identities = 39/122 (31%), Positives = 66/122 (54%) Frame = -2 Query: 625 PSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLISSFCRNSQFQLALEM 446 PS + I G +FRK + A +L +M+++ + PD T N L+ C + A E+ Sbjct: 428 PSSIACTAFIEGLRRFRKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANEL 487 Query: 445 FKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFDFSVATCEILIDGLLR 266 SKG + + ++FN L+ G+ ++ K +EG + EMLD+GF +A+ L++GL Sbjct: 488 RLLASSKGLDSDGMTFNILVNGYSREGKRKEGKRLLNEMLDLGFIPDLASYNRLMNGLSN 547 Query: 265 EG 260 G Sbjct: 548 GG 549 >emb|CBI20033.3| unnamed protein product [Vitis vinifera] Length = 481 Score = 273 bits (698), Expect = 2e-71 Identities = 130/212 (61%), Positives = 168/212 (79%) Frame = -2 Query: 640 LIDGKPSVVLYNILINGFAKFRKHDRALELYGRMVKDRVKPDVYTFNTLISSFCRNSQFQ 461 +IDGKPSV ++NILING+ K R+H++ + +Y +M+KDRVKPDV+TFN+LISS CRNSQF Sbjct: 174 MIDGKPSVAMHNILINGYVKCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFG 233 Query: 460 LALEMFKEMRSKGCNPNLVSFNTLIMGFFKQKKIEEGIGMAYEMLDMGFDFSVATCEILI 281 LALEMFKEM+ KGC+PN+VSFNTLI G F+++K EEG+GMAYEML++G +FS TCEIL+ Sbjct: 234 LALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGVGMAYEMLELGCEFSNVTCEILV 293 Query: 280 DGLLREGRVSKACDLLTDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQLVDELLAKGIP 101 DGL REGRV +A DLL D KGA+P+GFD ++E LC + ++R L+L+D+L KG Sbjct: 294 DGLCREGRVLEAFDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALELLDQLWRKGNA 353 Query: 100 LGPIACSTLIEGLRHAGKTAEAVTFTERMLKE 5 IAC+TLIEGLR GKT EA E+ML+E Sbjct: 354 PSSIACTTLIEGLRRFGKTEEAFQLMEKMLRE 385