BLASTX nr result

ID: Coptis21_contig00023124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023124
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]    43   2e-09
emb|CAN73765.1| hypothetical protein VITISV_035279 [Vitis vinifera]    40   1e-07
emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera]    41   3e-07
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]    46   3e-07
emb|CAN78434.1| hypothetical protein VITISV_003804 [Vitis vinifera]    41   5e-07

>emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
          Length = 1493

 Score = 43.1 bits (100), Expect(2) = 2e-09
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
 Frame = -1

Query: 324 HLLKQDLETRQTIGNGREVGGLYLFDPT--TPSAHQTXXXXXSHVNKDQLMLWYNRLGHV 151
           H + QDL + +TIG+ +E  GLY FD T     +  T     S+    +L+LW+ R+GH 
Sbjct: 500 HCVFQDLSSGKTIGSAKEREGLYYFDETDVLGQSSPTVCNSTSYSKDSELLLWHKRMGH- 558

Query: 150 PVSQS*RKYFP 118
           P  Q  +  FP
Sbjct: 559 PSFQYLKHLFP 569



 Score = 43.1 bits (100), Expect(2) = 2e-09
 Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = -3

Query: 136 LKKVLPSF-SSMSIDDFFCDSCMKAKHCRTIFPPSENKSTIPFNIV 2
           LK + PS  S+ +I DF C+ C  AKH RT FP S+ K +IPF ++
Sbjct: 564 LKHLFPSLCSNKTILDFQCEVCELAKHHRTSFPKSKYKPSIPFTLI 609


>emb|CAN73765.1| hypothetical protein VITISV_035279 [Vitis vinifera]
          Length = 2260

 Score = 40.4 bits (93), Expect(2) = 1e-07
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -1

Query: 330 LLHLLKQDLETRQTIGNGREVGGL-YLFDPTTPSAHQTXXXXXSHVNKDQLMLWYNRLGH 154
           L H L  D+ T++ IG G + GGL Y+ D +   A+ T        NK  ++LW+ RLGH
Sbjct: 377 LSHKLLSDILTKEIIGRGTKKGGLYYMEDFSIXQANHTRSSSDR--NKXNILLWHRRLGH 434



 Score = 40.0 bits (92), Expect(2) = 1e-07
 Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = -3

Query: 136 LKKVLPS-FSSMSIDDFFCDSCMKAKHCRTIFPPSENKSTIPFNIV 2
           LK V P  FS +S  DF C++C+ AK  R  +P S NKS +PF ++
Sbjct: 440 LKLVFPXLFSGLSNLDFKCETCILAKSHRVSYPLSFNKSQMPFELI 485


>emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera]
          Length = 1387

 Score = 40.8 bits (94), Expect(2) = 3e-07
 Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = -3

Query: 136 LKKVLPS-FSSMSIDDFFCDSCMKAKHCRTIFPPSENKSTIPFNIV 2
           LK V P+ FS +S  DF C++C+ AK  R  +P S NKS +PF ++
Sbjct: 528 LKLVFPALFSGLSNLDFKCETCILAKSHRVSYPLSFNKSQMPFELI 573



 Score = 38.5 bits (88), Expect(2) = 3e-07
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = -1

Query: 318 LKQDLETRQTIGNGREVGGL-YLFDPTTPSAHQTXXXXXSHVNKDQLMLWYNRLGH 154
           L QD+ T++ IG G + GGL Y+ D +   A+ T        NK  ++LW+ RLGH
Sbjct: 469 LLQDILTKEIIGRGTKKGGLYYMEDFSIGQANHTRSSSDR--NKANILLWHRRLGH 522


>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score = 45.8 bits (107), Expect(2) = 3e-07
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
 Frame = -1

Query: 312 QDLETRQTIGNGREVGGLYLFDPTTPS---AHQTXXXXXSHVNKDQLMLWYNRLGHVPVS 142
           Q+L + +TIGN RE+GGLY F+  + S      T     S  + D ++LW+ RLGH P  
Sbjct: 448 QELTSGRTIGNAREIGGLYFFENGSESRKPIQSTCFESISVASSDDIILWHYRLGH-PSF 506

Query: 141 QS*RKYFP 118
           Q  +  FP
Sbjct: 507 QYLKHLFP 514



 Score = 33.1 bits (74), Expect(2) = 3e-07
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -3

Query: 136 LKKVLPS-FSSMSIDDFFCDSCMKAKHCRTIFPPSENKSTIPFNIV 2
           LK + PS F + +   F C+ C  AKH RT FP    + + PF+++
Sbjct: 509 LKHLFPSLFRNKNPSSFQCEFCELAKHHRTSFPLQPYRISKPFSLI 554


>emb|CAN78434.1| hypothetical protein VITISV_003804 [Vitis vinifera]
          Length = 973

 Score = 41.2 bits (95), Expect(2) = 5e-07
 Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 136 LKKVLPS-FSSMSIDDFFCDSCMKAKHCRTIFPPSENKSTIPFNIV 2
           LKK+ PS F +  I  F CD C  AK  RT FP   NKS +PF ++
Sbjct: 145 LKKLFPSLFVNSDISGFHCDICELAKSHRTSFPLILNKSPLPFMVI 190



 Score = 37.4 bits (85), Expect(2) = 5e-07
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
 Frame = -1

Query: 315 KQDLETRQTIGNGREVGGLYLFDPTTPSAHQTXXXXXSH-----VNKDQLMLWYNRLGH 154
           +QD++TRQTI  G ++G LY  D  +  +++      ++       K ++ LW+ RLGH
Sbjct: 81  RQDIQTRQTINCGIKLGKLYYLDLQSNDSNKLQQALMANGFEGEKKKSEIWLWHRRLGH 139


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