BLASTX nr result

ID: Coptis21_contig00023110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023110
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60831.1| hypothetical protein VITISV_004737 [Vitis vinifera]   121   5e-26
ref|XP_002281810.1| PREDICTED: uncharacterized protein LOC100247...   120   9e-26
ref|XP_003524275.1| PREDICTED: uncharacterized protein LOC100806...   112   3e-23
ref|XP_003630069.1| Fasciclin-like arabinogalactan protein [Medi...   110   2e-22
emb|CBI26751.3| unnamed protein product [Vitis vinifera]              109   2e-22

>emb|CAN60831.1| hypothetical protein VITISV_004737 [Vitis vinifera]
          Length = 412

 Score =  121 bits (304), Expect = 5e-26
 Identities = 72/160 (45%), Positives = 95/160 (59%), Gaps = 3/160 (1%)
 Frame = +1

Query: 4   FSCNIQGMNSFSFPPQTQTDRGTXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXHNNGFS 183
           FSCNI+ +NS SFP Q  +DR                   A               NGFS
Sbjct: 190 FSCNIERVNSVSFPFQP-SDRS------------HSVPSFAIMRLMLRDAMVRLRMNGFS 236

Query: 184 VLSQALKVQYPEIVNLQNRTVFALDDEYSFYYGRAYLSNFSFHIVPNKMMLSSDLMKLPI 363
           +L+ AL+++YPE+V+LQN TVF LDD   F  G+AY+SN  FHIVPN+++L++DL KLP+
Sbjct: 237 ILALALRLKYPELVSLQNMTVFTLDDASIFTGGQAYVSNVRFHIVPNRLLLAADLQKLPV 296

Query: 364 GTTLPTLDPGQSLMVTTSGHL---MKINSVGIKDYDVVFN 474
            T LPTL+P Q L VTT+G     ++IN V IK  DV+ N
Sbjct: 297 ATLLPTLEPDQKLKVTTAGGXAMPIRINYVRIKKPDVMHN 336


>ref|XP_002281810.1| PREDICTED: uncharacterized protein LOC100247334 [Vitis vinifera]
           gi|297737558|emb|CBI26759.3| unnamed protein product
           [Vitis vinifera]
          Length = 412

 Score =  120 bits (302), Expect = 9e-26
 Identities = 72/160 (45%), Positives = 95/160 (59%), Gaps = 3/160 (1%)
 Frame = +1

Query: 4   FSCNIQGMNSFSFPPQTQTDRGTXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXHNNGFS 183
           FSCNI+ +NS SFP Q  +DR                   A               NGFS
Sbjct: 190 FSCNIERVNSVSFPFQP-SDRS------------HSVPSFAIMRLMLRDAMVRLRMNGFS 236

Query: 184 VLSQALKVQYPEIVNLQNRTVFALDDEYSFYYGRAYLSNFSFHIVPNKMMLSSDLMKLPI 363
           +L+ AL+++YPE+V+LQN TVF LDD   F  G+AY+SN  FHIVPN+++L++DL KLP+
Sbjct: 237 ILALALRLKYPELVSLQNMTVFTLDDASIFTGGQAYVSNVRFHIVPNRLLLAADLQKLPV 296

Query: 364 GTTLPTLDPGQSLMVTTSG---HLMKINSVGIKDYDVVFN 474
            T LPTL+P Q L VTT+G     ++IN V IK  DV+ N
Sbjct: 297 ATLLPTLEPDQKLKVTTAGGGAMPIRINYVRIKKPDVMHN 336


>ref|XP_003524275.1| PREDICTED: uncharacterized protein LOC100806312 [Glycine max]
          Length = 444

 Score =  112 bits (280), Expect = 3e-23
 Identities = 67/162 (41%), Positives = 86/162 (53%), Gaps = 5/162 (3%)
 Frame = +1

Query: 4   FSCNIQGMNSFSFPPQTQTDRGTXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXHNNGFS 183
           FSC+++ MNS SFP      R                   A              NNGF 
Sbjct: 201 FSCDVERMNSLSFPFHPD-HRSGHAQHHLHHSNSATVQPAAMMRLMLRDAMLRLRNNGFG 259

Query: 184 VLSQALKVQYPEIVNLQNRTVFALDDEYSFYYGRAYLSNFSFHIVPNKMMLSSDLMKLPI 363
           +L+ A+KV+Y E+V L N TVFA+DD   F    AY+ N  FHIVPN  +  +DL KLP+
Sbjct: 260 ILALAMKVKYAELVTLNNMTVFAVDDLSIFSGSHAYIGNVRFHIVPNHYLSIADLEKLPV 319

Query: 364 GTTLPTLDPGQSLMVTTSGH-----LMKINSVGIKDYDVVFN 474
           GT LPTL+ GQSL++TTSG       M+IN V +K  DV+ N
Sbjct: 320 GTALPTLERGQSLLITTSGRGETLAPMRINYVRVKVADVIRN 361


>ref|XP_003630069.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|355524091|gb|AET04545.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
          Length = 448

 Score =  110 bits (274), Expect = 2e-22
 Identities = 64/162 (39%), Positives = 88/162 (54%), Gaps = 5/162 (3%)
 Frame = +1

Query: 4   FSCNIQGMNSFSFPPQTQTDRGTXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXHNNGFS 183
           FSC+++ M+S SFP       G                  A              NNGFS
Sbjct: 200 FSCDVERMSSLSFPFHPDHRSGAHVHTPGATVLP------AIMRLMLRDAMVRLRNNGFS 253

Query: 184 VLSQALKVQYPEIVNLQNRTVFALDDEYSFYYGRAYLSNFSFHIVPNKMMLSSDLMKLPI 363
           +LS A+KV+Y E++ L N T+FA+DD   F   ++Y+SN  FHI+PN  +  +DL KLP+
Sbjct: 254 ILSLAMKVKYAELITLNNMTIFAVDDLSIFSGSQSYISNVRFHIIPNHYLSIADLEKLPV 313

Query: 364 GTTLPTLDPGQSLMVTTSG-----HLMKINSVGIKDYDVVFN 474
           GT LPTL+ GQ L++TTSG       M+IN V +K  DV+ N
Sbjct: 314 GTALPTLERGQPLLITTSGGGVTSAPMRINYVRVKVADVIRN 355


>emb|CBI26751.3| unnamed protein product [Vitis vinifera]
          Length = 403

 Score =  109 bits (273), Expect = 2e-22
 Identities = 68/162 (41%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
 Frame = +1

Query: 4   FSCNIQGMNSFSFPPQTQTDRGTXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXHNNGFS 183
           +SCNI+ M S   PPQ                        +               +G+ 
Sbjct: 184 YSCNIERMTSLLLPPQPSE-------------RPQSISSFSITRLMLRDAMLRLRISGYG 230

Query: 184 VLSQALKVQYPEIVNLQNRTVFALDDEYSFYYGRAYLSNFSFHIVPNKMMLSSDLMKLPI 363
           +LS AL V+Y E+V LQN TVFALDD   F  G  Y+ N  FHIVPN+M++++DL KLP+
Sbjct: 231 ILSLALGVKYAELVALQNMTVFALDDASIFSGGHEYIHNVRFHIVPNRMLMAADLAKLPV 290

Query: 364 GTTLPTLDPGQSLMVTTSG---HLMKINSVGIKDYDVVFNQR 480
            T LPTL  GQ LMVTTSG     M IN V IK  DV+ N R
Sbjct: 291 ATVLPTLSQGQQLMVTTSGGGPTPMMINYVRIKATDVIDNLR 332


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