BLASTX nr result
ID: Coptis21_contig00023110
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023110 (502 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN60831.1| hypothetical protein VITISV_004737 [Vitis vinifera] 121 5e-26 ref|XP_002281810.1| PREDICTED: uncharacterized protein LOC100247... 120 9e-26 ref|XP_003524275.1| PREDICTED: uncharacterized protein LOC100806... 112 3e-23 ref|XP_003630069.1| Fasciclin-like arabinogalactan protein [Medi... 110 2e-22 emb|CBI26751.3| unnamed protein product [Vitis vinifera] 109 2e-22 >emb|CAN60831.1| hypothetical protein VITISV_004737 [Vitis vinifera] Length = 412 Score = 121 bits (304), Expect = 5e-26 Identities = 72/160 (45%), Positives = 95/160 (59%), Gaps = 3/160 (1%) Frame = +1 Query: 4 FSCNIQGMNSFSFPPQTQTDRGTXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXHNNGFS 183 FSCNI+ +NS SFP Q +DR A NGFS Sbjct: 190 FSCNIERVNSVSFPFQP-SDRS------------HSVPSFAIMRLMLRDAMVRLRMNGFS 236 Query: 184 VLSQALKVQYPEIVNLQNRTVFALDDEYSFYYGRAYLSNFSFHIVPNKMMLSSDLMKLPI 363 +L+ AL+++YPE+V+LQN TVF LDD F G+AY+SN FHIVPN+++L++DL KLP+ Sbjct: 237 ILALALRLKYPELVSLQNMTVFTLDDASIFTGGQAYVSNVRFHIVPNRLLLAADLQKLPV 296 Query: 364 GTTLPTLDPGQSLMVTTSGHL---MKINSVGIKDYDVVFN 474 T LPTL+P Q L VTT+G ++IN V IK DV+ N Sbjct: 297 ATLLPTLEPDQKLKVTTAGGXAMPIRINYVRIKKPDVMHN 336 >ref|XP_002281810.1| PREDICTED: uncharacterized protein LOC100247334 [Vitis vinifera] gi|297737558|emb|CBI26759.3| unnamed protein product [Vitis vinifera] Length = 412 Score = 120 bits (302), Expect = 9e-26 Identities = 72/160 (45%), Positives = 95/160 (59%), Gaps = 3/160 (1%) Frame = +1 Query: 4 FSCNIQGMNSFSFPPQTQTDRGTXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXHNNGFS 183 FSCNI+ +NS SFP Q +DR A NGFS Sbjct: 190 FSCNIERVNSVSFPFQP-SDRS------------HSVPSFAIMRLMLRDAMVRLRMNGFS 236 Query: 184 VLSQALKVQYPEIVNLQNRTVFALDDEYSFYYGRAYLSNFSFHIVPNKMMLSSDLMKLPI 363 +L+ AL+++YPE+V+LQN TVF LDD F G+AY+SN FHIVPN+++L++DL KLP+ Sbjct: 237 ILALALRLKYPELVSLQNMTVFTLDDASIFTGGQAYVSNVRFHIVPNRLLLAADLQKLPV 296 Query: 364 GTTLPTLDPGQSLMVTTSG---HLMKINSVGIKDYDVVFN 474 T LPTL+P Q L VTT+G ++IN V IK DV+ N Sbjct: 297 ATLLPTLEPDQKLKVTTAGGGAMPIRINYVRIKKPDVMHN 336 >ref|XP_003524275.1| PREDICTED: uncharacterized protein LOC100806312 [Glycine max] Length = 444 Score = 112 bits (280), Expect = 3e-23 Identities = 67/162 (41%), Positives = 86/162 (53%), Gaps = 5/162 (3%) Frame = +1 Query: 4 FSCNIQGMNSFSFPPQTQTDRGTXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXHNNGFS 183 FSC+++ MNS SFP R A NNGF Sbjct: 201 FSCDVERMNSLSFPFHPD-HRSGHAQHHLHHSNSATVQPAAMMRLMLRDAMLRLRNNGFG 259 Query: 184 VLSQALKVQYPEIVNLQNRTVFALDDEYSFYYGRAYLSNFSFHIVPNKMMLSSDLMKLPI 363 +L+ A+KV+Y E+V L N TVFA+DD F AY+ N FHIVPN + +DL KLP+ Sbjct: 260 ILALAMKVKYAELVTLNNMTVFAVDDLSIFSGSHAYIGNVRFHIVPNHYLSIADLEKLPV 319 Query: 364 GTTLPTLDPGQSLMVTTSGH-----LMKINSVGIKDYDVVFN 474 GT LPTL+ GQSL++TTSG M+IN V +K DV+ N Sbjct: 320 GTALPTLERGQSLLITTSGRGETLAPMRINYVRVKVADVIRN 361 >ref|XP_003630069.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|355524091|gb|AET04545.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] Length = 448 Score = 110 bits (274), Expect = 2e-22 Identities = 64/162 (39%), Positives = 88/162 (54%), Gaps = 5/162 (3%) Frame = +1 Query: 4 FSCNIQGMNSFSFPPQTQTDRGTXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXHNNGFS 183 FSC+++ M+S SFP G A NNGFS Sbjct: 200 FSCDVERMSSLSFPFHPDHRSGAHVHTPGATVLP------AIMRLMLRDAMVRLRNNGFS 253 Query: 184 VLSQALKVQYPEIVNLQNRTVFALDDEYSFYYGRAYLSNFSFHIVPNKMMLSSDLMKLPI 363 +LS A+KV+Y E++ L N T+FA+DD F ++Y+SN FHI+PN + +DL KLP+ Sbjct: 254 ILSLAMKVKYAELITLNNMTIFAVDDLSIFSGSQSYISNVRFHIIPNHYLSIADLEKLPV 313 Query: 364 GTTLPTLDPGQSLMVTTSG-----HLMKINSVGIKDYDVVFN 474 GT LPTL+ GQ L++TTSG M+IN V +K DV+ N Sbjct: 314 GTALPTLERGQPLLITTSGGGVTSAPMRINYVRVKVADVIRN 355 >emb|CBI26751.3| unnamed protein product [Vitis vinifera] Length = 403 Score = 109 bits (273), Expect = 2e-22 Identities = 68/162 (41%), Positives = 84/162 (51%), Gaps = 3/162 (1%) Frame = +1 Query: 4 FSCNIQGMNSFSFPPQTQTDRGTXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXHNNGFS 183 +SCNI+ M S PPQ + +G+ Sbjct: 184 YSCNIERMTSLLLPPQPSE-------------RPQSISSFSITRLMLRDAMLRLRISGYG 230 Query: 184 VLSQALKVQYPEIVNLQNRTVFALDDEYSFYYGRAYLSNFSFHIVPNKMMLSSDLMKLPI 363 +LS AL V+Y E+V LQN TVFALDD F G Y+ N FHIVPN+M++++DL KLP+ Sbjct: 231 ILSLALGVKYAELVALQNMTVFALDDASIFSGGHEYIHNVRFHIVPNRMLMAADLAKLPV 290 Query: 364 GTTLPTLDPGQSLMVTTSG---HLMKINSVGIKDYDVVFNQR 480 T LPTL GQ LMVTTSG M IN V IK DV+ N R Sbjct: 291 ATVLPTLSQGQQLMVTTSGGGPTPMMINYVRIKATDVIDNLR 332