BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023108
         (1476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   238   3e-60
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...   172   2e-40
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   170   1e-39
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   163   9e-38
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   162   2e-37

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  238 bits (607), Expect = 3e-60
 Identities = 155/402 (38%), Positives = 215/402 (53%), Gaps = 15/402 (3%)
 Frame = +1

Query: 214  LMACWSELPEDIIALFAKRLPPIEDFVRFSAVCKSWRSAAIREKQRRRINCFAPWLMLTN 393
            +MA WS++P+D + L A++L  +ED+VRF  VCKSW S    +K+    +  +PWLML  
Sbjct: 918  VMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSI-FEDKECCCPSSKSPWLMLAE 976

Query: 394  RENDKIANVNDEGNITFYSLSSKKFFHIQLPEAQGRRCWGSPYGWLFTVGIDCNIHLLNP 573
            +EN +I          FYS  S K + I+LPE  G+ CWGSPYGWL T+G D ++ LLNP
Sbjct: 977  KENSEIRG--------FYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNP 1028

Query: 574  LSRIQISFP-LRTTFRYQYDIGAAGPEHLCR-VFVKKFALASNPCFWTIPPALESDKSSV 747
            L+R+QI  P LR        I ++      + +F+ K  L+S P          S     
Sbjct: 1029 LTRVQILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAP----------SSPDCA 1078

Query: 748  VMVIYGEGFRLAFASLGDEAWTDVESPIGCYDDIMFFNGSFYAVDTEGMLRICDITTTPP 927
            VM+IY +  RLAF   G + WT +ES  G  DDI++FNGSF AV+    + ICDI+ +  
Sbjct: 1079 VMIIYSDYGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQL 1138

Query: 928  KTVDIACPPDGVRSTDQF-----YLTEISGDLHLIARVL--TADDDAPACEFHYDTLCIG 1086
            KT+  A  P  ++  D+      YL E  G+++++ R L  TA  D P    +  T    
Sbjct: 1139 KTIRFAAAP-ALQDVDEIEYEAKYLVESGGEIYMVTRNLYDTARRDIP----YMRTWTFS 1193

Query: 1087 LFKFDFHEKIWIEVFNLGDHALFIGNNTGFVISTSDYPTLKGNSIYFTDDRYECYC---- 1254
            + K D   K W EV NL   + F+GNN  F    SDYP  + NSIYFTDD    YC    
Sbjct: 1194 VLKLDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDD----YCGFLN 1249

Query: 1255 --NNFCDMGVYDYNEETSESFYLGNADDIFSKLSRPLFFMPS 1374
               NF DMG+Y++     E + +G+  D  S  S PL+  PS
Sbjct: 1250 IPRNF-DMGIYNFQNTQIEHYPVGH--DALSMFSAPLWIRPS 1288


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
            gi|223551309|gb|EEF52795.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score =  172 bits (437), Expect = 2e-40
 Identities = 118/354 (33%), Positives = 170/354 (48%), Gaps = 12/354 (3%)
 Frame = +1

Query: 217  MACWSELPEDIIALFAKRLPPIEDFVRFSAVCKSWRSAAIREKQRRRINCFAPWLMLTNR 396
            M+ WSELP++++    ++     D++   AVCKSW SA    K+   + C  PWL+L   
Sbjct: 1    MSNWSELPQELLQTITQKQSNYVDYISTRAVCKSWWSAI--PKKPHDLLCQLPWLLLPYH 58

Query: 397  ENDKIANVNDEGNITFYSLSSKKFFHIQLPEAQGRRCWGSPYGWLFTVGIDCNIHLLNPL 576
            +N    N N  G   FY+L+  K +H++LPE   +RC GS +GWL  V    +I LLNPL
Sbjct: 59   KN----NPNHRG---FYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIFLLNPL 111

Query: 577  SRIQISFPLRTTFRY-QYDIGAAGPEHLCRVFVKKFALASNPCFWTIPPALESDKSS--- 744
            ++ +I  P  +TF Y   ++      ++   F  K  L     +  I  A+ S+  S   
Sbjct: 112  TKARIELPSLSTFPYFPTEVVYENSRNINEYFNTKAKLRIRETY--IRKAIVSEDPSTGN 169

Query: 745  -VVMVIY---GEGFRLAFASLGDEAWTDVE--SPIGCYDDIMFFNGSFYAVDTEGMLRIC 906
              VM IY        +AF   GD  W  ++  S    Y D+MF  G FYAVD +G + IC
Sbjct: 170  FAVMAIYKTINSTENIAFCKSGDATWFTIQETSQKIHYQDVMFHRGKFYAVDDKGRVSIC 229

Query: 907  DITTTPPKTVDIACPP--DGVRSTDQFYLTEISGDLHLIARVLTADDDAPACEFHYDTLC 1080
                 PP  + +A PP    +    Q+YL  +  DL L  R            + Y T  
Sbjct: 230  ITDINPPSVIQVADPPPVPPLMGYKQWYLASLDEDLILAGRFRKYRGSG----YEYQTHK 285

Query: 1081 IGLFKFDFHEKIWIEVFNLGDHALFIGNNTGFVISTSDYPTLKGNSIYFTDDRY 1242
              ++K D     W+E+  LGD   F+G N    IST +Y    GN IYFTDD++
Sbjct: 286  FMVYKLDASSSNWLELDGLGDMLSFLGWNCFHSISTQNYRNYSGNCIYFTDDKF 339


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  170 bits (430), Expect = 1e-39
 Identities = 119/386 (30%), Positives = 190/386 (49%), Gaps = 26/386 (6%)
 Frame = +1

Query: 226  WSELPEDIIALFAKRLPPIEDFVRFSAVCKSWRSAAIREKQRRRINCFAPWLMLTNREND 405
            WS+LP ++I + +K L    D++   AVC +WR +    K    +    PWLML   ++ 
Sbjct: 5    WSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSI--PKTPNHLPPQLPWLMLPQSQSQ 62

Query: 406  KIANVNDEGNITFYSLSSKKFFHIQLPEAQGR-RCWGSPYGWLFTVGIDCNIHLLNPLSR 582
                 +++    F+SLS+ KF  + LPE   R R  GS +GWL  +     I L+NPL+R
Sbjct: 63   -----SNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTR 117

Query: 583  IQISFPLRTTFR--YQYDIGAAGPEHLCR----------------VFVKKFALASNPCFW 708
             ++S P  ++F     ++    G E+  R                 F++K  L+S+P   
Sbjct: 118  AKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPL-- 175

Query: 709  TIPPALESDKSSVVMVIYGEGFRLAFASLGDEAWTDVESPIGCYDDIMFFNGSFYAVDTE 888
                    D + VV+ I  +   LA+   GD++W+ VE+     +D++F NG FYAV+  
Sbjct: 176  -------KDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKA 228

Query: 889  GMLRICDITTTPPKTVDIACPPDGVRSTDQFYLTEISGDLHLIARVLTA--DDDAPACEF 1062
            G + ICDI++  P+   +  P       D  YL     +L L+ R L    + D P  E 
Sbjct: 229  GQIVICDISSDSPRVSFMETPRQA--GGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEP 286

Query: 1063 H--YDTLCIGLFKFDFHEKIWIEVFNLGDHALFIGNNTGFVISTSDYPTLKGNSIYFTDD 1236
            H  Y T+   +F+ D++   W+ +  LGD ALFIG N+   +S +D+    GN IY+TDD
Sbjct: 287  HLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDD 346

Query: 1237 RYEC-YCNNF--CDMGVYDYNEETSE 1305
              +  Y  +F   D+G++   +ET E
Sbjct: 347  YLDANYDGHFGDHDLGIFKLCDETIE 372


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  163 bits (413), Expect = 9e-38
 Identities = 118/387 (30%), Positives = 179/387 (46%), Gaps = 24/387 (6%)
 Frame = +1

Query: 217  MACWSELPEDIIALFAKRLPPIEDFVRFSAVCKSWRSAAIREKQRRRINCFAPWLMLTNR 396
            MA WS+L  +++   AK+     D+VRF AVC +WR++    K    +    PWLML   
Sbjct: 1    MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASV--PKTPHHLPTQLPWLMLPQS 58

Query: 397  ENDKIANVNDEGNITFYSLSSKKFFHIQLPEAQGRRCW-GSPYGWLFTVGIDCNIHLLNP 573
            +              F+SLS  KF  +QLPEA  RR   GS +GWL  +     I LLNP
Sbjct: 59   QPHHTHR-------PFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNP 111

Query: 574  LSRIQISFPLRTTFR--YQYDIGAAGPEHLCRV----------------FVKKFALASNP 699
            L+R ++  P  +TF    +++    G E+  R                 F+KK  L+S+P
Sbjct: 112  LTRSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSP 171

Query: 700  CFWTIPPALESDKSSVVMVIYGEGFRLAFASLGDEAWTDVESPIGCYDDIMFFNGSFYAV 879
                      +    + +VI  +   LA     D++WT +E      +D++F  G FYAV
Sbjct: 172  A---------NGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAV 222

Query: 880  DTEGMLRICDITTTPPKTVDIACPPDGVRSTDQFYLTEISGDLHLIARVL--TADDDAPA 1053
            +  G + +CD++ + P+   I  P       D  YL E   +L L+ R L  T D +   
Sbjct: 223  NKYGSIAVCDVSGSSPRVSIIEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEPDQ 280

Query: 1054 CEFHYDTLCIGLFKFDFHEKIWIEVFNLGDHALFIGNNTGFVISTSDYPTLKGNSIYFTD 1233
                Y T    + + D     W  V +LGD ALF+G N    +S+ D+P  KGN IY+TD
Sbjct: 281  TSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTD 340

Query: 1234 DRYECYCNNF---CDMGVYDYNEETSE 1305
            D  E   +      D+G+++  + + E
Sbjct: 341  DYSEDNYDGIGGEQDLGIFNLEDGSIE 367


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  162 bits (411), Expect = 2e-37
 Identities = 118/387 (30%), Positives = 179/387 (46%), Gaps = 24/387 (6%)
 Frame = +1

Query: 217  MACWSELPEDIIALFAKRLPPIEDFVRFSAVCKSWRSAAIREKQRRRINCFAPWLMLTNR 396
            MA WS+L  +++   AK+     D+VRF AVC +WR++    K    +    PWLML   
Sbjct: 1    MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASV--PKTPHHLPTQLPWLMLPQS 58

Query: 397  ENDKIANVNDEGNITFYSLSSKKFFHIQLPEAQGRRCW-GSPYGWLFTVGIDCNIHLLNP 573
            +              F+SLS  KF  +QLPEA  RR   GS +GWL  +     I LLNP
Sbjct: 59   QPHHTHR-------PFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNP 111

Query: 574  LSRIQISFPLRTTFR--YQYDIGAAGPEHLCRV----------------FVKKFALASNP 699
            L+R ++  P  +TF    +++    G E+  R                 F+KK  L+S+P
Sbjct: 112  LTRSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSP 171

Query: 700  CFWTIPPALESDKSSVVMVIYGEGFRLAFASLGDEAWTDVESPIGCYDDIMFFNGSFYAV 879
                      +    + +VI  +   LA     D++WT +E      +D++F  G FYAV
Sbjct: 172  A---------NGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAV 222

Query: 880  DTEGMLRICDITTTPPKTVDIACPPDGVRSTDQFYLTEISGDLHLIARVL--TADDDAPA 1053
            +  G + +CD++ + P+   I  P       D  YL E   +L L+ R L  T D +   
Sbjct: 223  NKYGSIAVCDVSGSSPRVSIIEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEXDQ 280

Query: 1054 CEFHYDTLCIGLFKFDFHEKIWIEVFNLGDHALFIGNNTGFVISTSDYPTLKGNSIYFTD 1233
                Y T    + + D     W  V +LGD ALF+G N    +S+ D+P  KGN IY+TD
Sbjct: 281  TSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTD 340

Query: 1234 DRYECYCNNF---CDMGVYDYNEETSE 1305
            D  E   +      D+G+++  + + E
Sbjct: 341  DYSEDNYDGIGGEQDLGIFNLEDGSIE 367