BLASTX nr result

ID: Coptis21_contig00023106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023106
         (1777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15032.3| unnamed protein product [Vitis vinifera]              317   5e-84
emb|CAN67883.1| hypothetical protein VITISV_022357 [Vitis vinifera]   317   7e-84
ref|XP_002282800.1| PREDICTED: probable inactive poly [ADP-ribos...   314   6e-83
ref|XP_002511397.1| conserved hypothetical protein [Ricinus comm...   300   6e-79
ref|XP_002322165.1| predicted protein [Populus trichocarpa] gi|2...   298   4e-78

>emb|CBI15032.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  317 bits (813), Expect = 5e-84
 Identities = 166/305 (54%), Positives = 207/305 (67%)
 Frame = +3

Query: 411  GLVKLGEEDNSYKIVKKAFVSGMKSLAKHTEVVSVHKNVFSGFNGQARLQSFRIFSETMT 590
            GLV+L E++  ++I++KA VSG+  L +HT VV +H+N ++    QARLQSFRIF   + 
Sbjct: 39   GLVRLDEDEKLHRIIEKALVSGLGPLRQHTSVVDIHRNGYASVISQARLQSFRIFGRAVE 98

Query: 591  KKCGKDAGNVKFAWYGASKEGVSRIVNHGFGHCGRPENNGSYGFGIYLSPHGLSIDSAMS 770
            KKC  +A NVKF WY ASK+ + RI++HGF H     +NG YG G+YL PH  SI+S  S
Sbjct: 99   KKCEGNA-NVKFGWYSASKDEIGRIISHGFSH-----SNGLYGCGVYLYPHHSSIESMKS 152

Query: 771  TIKGEDGLRHVVLCRVILGNMEEVHPGSDQSHPSSMDFDSGVVNLLSPKKYVVWSTHMNT 950
             +  EDGLRH++LCRVILG ME VHPGS Q HPSS DFDSGV NL +PKKY+VWSTHMNT
Sbjct: 153  CVVDEDGLRHLLLCRVILGKMEVVHPGSQQYHPSSEDFDSGVDNLPAPKKYIVWSTHMNT 212

Query: 951  HILPEYVISFKAPPSCFVGKQFNVNQMCLVNNGKRLDELNSDGFSNCKVLQEPTVKPKSP 1130
            HILPEYV++F+APP             CL             GF N    Q    KP SP
Sbjct: 213  HILPEYVVTFRAPP-------------CL------------KGFLN---TQGSLKKPTSP 244

Query: 1131 WMPFPTLISILSRFLPPIKISLIQKFHREYQEKKLSRQHLIQHVRQIAGDKLLISIIKEF 1310
            WMPF TLIS+LS+FLPP  ++LI K HR+++E K+ R  LI+ VRQIAGDKLL  +IK  
Sbjct: 245  WMPFTTLISVLSKFLPPQSVNLIAKHHRDHRENKIPRHELIRLVRQIAGDKLLTVVIKSH 304

Query: 1311 RSKQL 1325
            R+KQL
Sbjct: 305  RAKQL 309


>emb|CAN67883.1| hypothetical protein VITISV_022357 [Vitis vinifera]
          Length = 341

 Score =  317 bits (812), Expect = 7e-84
 Identities = 166/305 (54%), Positives = 207/305 (67%)
 Frame = +3

Query: 411  GLVKLGEEDNSYKIVKKAFVSGMKSLAKHTEVVSVHKNVFSGFNGQARLQSFRIFSETMT 590
            GLV+L E++  ++I++KA VSG+  L +HT VV +H+N ++    QARLQSFRIF   + 
Sbjct: 36   GLVRLDEDEKLHRIIEKAXVSGLGPLRQHTSVVDIHRNGYASVISQARLQSFRIFGRAVE 95

Query: 591  KKCGKDAGNVKFAWYGASKEGVSRIVNHGFGHCGRPENNGSYGFGIYLSPHGLSIDSAMS 770
            KKC  +A NVKF WY ASK+ + RI++HGF H     +NG YG G+YL PH  SI+S  S
Sbjct: 96   KKCEGNA-NVKFGWYSASKDEIGRIISHGFSH-----SNGLYGCGVYLYPHHSSIESMKS 149

Query: 771  TIKGEDGLRHVVLCRVILGNMEEVHPGSDQSHPSSMDFDSGVVNLLSPKKYVVWSTHMNT 950
             +  EDGLRH++LCRVILG ME VHPGS Q HPSS DFDSGV NL +PKKY+VWSTHMNT
Sbjct: 150  CVVDEDGLRHLLLCRVILGKMEVVHPGSQQYHPSSEDFDSGVDNLPAPKKYIVWSTHMNT 209

Query: 951  HILPEYVISFKAPPSCFVGKQFNVNQMCLVNNGKRLDELNSDGFSNCKVLQEPTVKPKSP 1130
            HILPEYV++F+APP             CL             GF N    Q    KP SP
Sbjct: 210  HILPEYVVTFRAPP-------------CL------------KGFLN---TQGSLKKPTSP 241

Query: 1131 WMPFPTLISILSRFLPPIKISLIQKFHREYQEKKLSRQHLIQHVRQIAGDKLLISIIKEF 1310
            WMPF TLIS+LS+FLPP  ++LI K HR+++E K+ R  LI+ VRQIAGDKLL  +IK  
Sbjct: 242  WMPFTTLISVLSKFLPPQSVNLIAKHHRDHRENKIPRHELIRLVRQIAGDKLLTVVIKSH 301

Query: 1311 RSKQL 1325
            R+KQL
Sbjct: 302  RAKQL 306


>ref|XP_002282800.1| PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO2 [Vitis
            vinifera]
          Length = 310

 Score =  314 bits (804), Expect = 6e-83
 Identities = 164/303 (54%), Positives = 205/303 (67%)
 Frame = +3

Query: 411  GLVKLGEEDNSYKIVKKAFVSGMKSLAKHTEVVSVHKNVFSGFNGQARLQSFRIFSETMT 590
            GLV+L E++  ++I++KA VSG+  L +HT VV +H+N ++    QARLQSFRIF   + 
Sbjct: 39   GLVRLDEDEKLHRIIEKALVSGLGPLRQHTSVVDIHRNGYASVISQARLQSFRIFGRAVE 98

Query: 591  KKCGKDAGNVKFAWYGASKEGVSRIVNHGFGHCGRPENNGSYGFGIYLSPHGLSIDSAMS 770
            KKC  +A NVKF WY ASK+ + RI++HGF H     +NG YG G+YL PH  SI+S  S
Sbjct: 99   KKCEGNA-NVKFGWYSASKDEIGRIISHGFSH-----SNGLYGCGVYLYPHHSSIESMKS 152

Query: 771  TIKGEDGLRHVVLCRVILGNMEEVHPGSDQSHPSSMDFDSGVVNLLSPKKYVVWSTHMNT 950
             +  EDGLRH++LCRVILG ME VHPGS Q HPSS DFDSGV NL +PKKY+VWSTHMNT
Sbjct: 153  CVVDEDGLRHLLLCRVILGKMEVVHPGSQQYHPSSEDFDSGVDNLPAPKKYIVWSTHMNT 212

Query: 951  HILPEYVISFKAPPSCFVGKQFNVNQMCLVNNGKRLDELNSDGFSNCKVLQEPTVKPKSP 1130
            HILPEYV++F+APP             CL             GF N    Q    KP SP
Sbjct: 213  HILPEYVVTFRAPP-------------CL------------KGFLN---TQGSLKKPTSP 244

Query: 1131 WMPFPTLISILSRFLPPIKISLIQKFHREYQEKKLSRQHLIQHVRQIAGDKLLISIIKEF 1310
            WMPF TLIS+LS+FLPP  ++LI K HR+++E K+ R  LI+ VRQIAGDKLL  +IK  
Sbjct: 245  WMPFTTLISVLSKFLPPQSVNLIAKHHRDHRENKIPRHELIRLVRQIAGDKLLTVVIKSH 304

Query: 1311 RSK 1319
            R+K
Sbjct: 305  RAK 307


>ref|XP_002511397.1| conserved hypothetical protein [Ricinus communis]
            gi|223550512|gb|EEF51999.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 374

 Score =  300 bits (769), Expect = 6e-79
 Identities = 157/304 (51%), Positives = 202/304 (66%), Gaps = 1/304 (0%)
 Frame = +3

Query: 411  GLVKLGEEDNSYKIVKKAFVSGMKSLAKHTEVVSVHKNVFSGFNGQARLQSFRIFSETMT 590
            GLV+L E D    ++K+ F+SG+  L K   VV++H+N +SG  GQAR+QSF+IF++ M 
Sbjct: 70   GLVRLSEGDRVNDLIKRRFISGLGLLGKQATVVAIHRNKYSGIVGQARMQSFQIFTKAME 129

Query: 591  KKCGKDAGNVKFAWYGAS-KEGVSRIVNHGFGHCGRPENNGSYGFGIYLSPHGLSIDSAM 767
             KCG +A NVK+AW+GAS ++ +  I+ HGFG     +NNG YG GIYLSP    ++S  
Sbjct: 130  DKCGGNA-NVKYAWFGASSRDDICNIMTHGFGRQIN-DNNGLYGCGIYLSPDDSPLESVK 187

Query: 768  STIKGEDGLRHVVLCRVILGNMEEVHPGSDQSHPSSMDFDSGVVNLLSPKKYVVWSTHMN 947
            +    +DGLRH++LCRVILG  EEVHPGS+Q HPSS  FDSG+   LSPKKY+VWST+MN
Sbjct: 188  NLRVDKDGLRHLLLCRVILGRSEEVHPGSEQCHPSSEKFDSGIDTFLSPKKYIVWSTYMN 247

Query: 948  THILPEYVISFKAPPSCFVGKQFNVNQMCLVNNGKRLDELNSDGFSNCKVLQEPTVKPKS 1127
            THI PE+VISFKAP                                 C + + P V P S
Sbjct: 248  THIFPEFVISFKAP---------------------------------CCLKESPGV-PTS 273

Query: 1128 PWMPFPTLISILSRFLPPIKISLIQKFHREYQEKKLSRQHLIQHVRQIAGDKLLISIIKE 1307
            PWMPFP LIS LS FLPP  I L+ K H++++EKK+SRQ LIQ VRQIAGD+LLI++IK 
Sbjct: 274  PWMPFPALISALSEFLPPATIGLLDKHHKDHREKKISRQELIQRVRQIAGDRLLIAVIKS 333

Query: 1308 FRSK 1319
            FR+K
Sbjct: 334  FRTK 337


>ref|XP_002322165.1| predicted protein [Populus trichocarpa] gi|222869161|gb|EEF06292.1|
            predicted protein [Populus trichocarpa]
          Length = 291

 Score =  298 bits (762), Expect = 4e-78
 Identities = 158/318 (49%), Positives = 201/318 (63%)
 Frame = +3

Query: 366  NGVSPKKEVGYFDTVGLVKLGEEDNSYKIVKKAFVSGMKSLAKHTEVVSVHKNVFSGFNG 545
            +GVS  +   + D  GL++L E D  + ++K+ FVSG+  L K   VV++H+N +SG   
Sbjct: 6    SGVSYNQSPSFND--GLIRLFEGDRVHDLIKQRFVSGLGLLGKKATVVAIHRNTYSGVLE 63

Query: 546  QARLQSFRIFSETMTKKCGKDAGNVKFAWYGASKEGVSRIVNHGFGHCGRPENNGSYGFG 725
            QAR+QSF+I ++ M KKCG DA NVKF WYG +++ +  I+ HGF       +NG YG G
Sbjct: 64   QARMQSFQIIAKAMEKKCGGDA-NVKFGWYGGTRDEICEIMKHGFSARMIDNSNGLYGSG 122

Query: 726  IYLSPHGLSIDSAMSTIKGEDGLRHVVLCRVILGNMEEVHPGSDQSHPSSMDFDSGVVNL 905
            IYLSP    ++       G+DGLRH++LCRVILG  E VHPGSDQ HPSS +FDSG+ NL
Sbjct: 123  IYLSPDDSPVECVKKLSVGKDGLRHMLLCRVILGKAEVVHPGSDQYHPSSDEFDSGMDNL 182

Query: 906  LSPKKYVVWSTHMNTHILPEYVISFKAPPSCFVGKQFNVNQMCLVNNGKRLDELNSDGFS 1085
             SPKKY+VWS  MNTHILPEYVISF AP S   G                          
Sbjct: 183  SSPKKYIVWSARMNTHILPEYVISFSAPSSLKGGSS------------------------ 218

Query: 1086 NCKVLQEPTVKPKSPWMPFPTLISILSRFLPPIKISLIQKFHREYQEKKLSRQHLIQHVR 1265
                    T+ P SPWMPFP+LIS LS+FLPP    LI K++R ++ KK+SRQ LIQ VR
Sbjct: 219  --------TILPTSPWMPFPSLISALSKFLPPTTTKLIIKYYRAHRAKKISRQELIQQVR 270

Query: 1266 QIAGDKLLISIIKEFRSK 1319
            +I GDKLLIS+IK FR+K
Sbjct: 271  KIVGDKLLISVIKSFRTK 288