BLASTX nr result
ID: Coptis21_contig00023084
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023084 (456 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI38908.3| unnamed protein product [Vitis vinifera] 65 6e-09 ref|XP_002274837.1| PREDICTED: scarecrow-like protein 6-like [Vi... 65 6e-09 ref|XP_002266783.1| PREDICTED: scarecrow-like protein 22-like [V... 64 2e-08 ref|XP_002329873.1| GRAS family transcription factor [Populus tr... 57 2e-06 >emb|CBI38908.3| unnamed protein product [Vitis vinifera] Length = 573 Score = 65.1 bits (157), Expect = 6e-09 Identities = 32/47 (68%), Positives = 34/47 (72%) Frame = -2 Query: 158 GTEDWESVLFESGASLIQEQSFLGWIMGKVEDPPSSLKHLLQNGGGG 18 G EDWESVL E+ AS QEQS L WIMG VEDP L LLQ+GGGG Sbjct: 89 GMEDWESVLSETAASPSQEQSILRWIMGDVEDPSVGLNKLLQSGGGG 135 >ref|XP_002274837.1| PREDICTED: scarecrow-like protein 6-like [Vitis vinifera] Length = 804 Score = 65.1 bits (157), Expect = 6e-09 Identities = 32/47 (68%), Positives = 34/47 (72%) Frame = -2 Query: 158 GTEDWESVLFESGASLIQEQSFLGWIMGKVEDPPSSLKHLLQNGGGG 18 G EDWESVL E+ AS QEQS L WIMG VEDP L LLQ+GGGG Sbjct: 174 GMEDWESVLSETAASPSQEQSILRWIMGDVEDPSVGLNKLLQSGGGG 220 >ref|XP_002266783.1| PREDICTED: scarecrow-like protein 22-like [Vitis vinifera] Length = 814 Score = 63.5 bits (153), Expect = 2e-08 Identities = 38/79 (48%), Positives = 45/79 (56%), Gaps = 13/79 (16%) Frame = -2 Query: 206 SDLQPIAKALQVVNRGGT------------EDWESVLFESGA-SLIQEQSFLGWIMGKVE 66 ++LQPI L + GG EDWES+L ES A S EQS LGWI G V+ Sbjct: 123 AELQPITSGLVELVAGGAGEERCGGLGLGLEDWESMLSESAAASPGHEQSLLGWISGDVD 182 Query: 65 DPPSSLKHLLQNGGGGLDF 9 DP LKHLLQ+GG L+F Sbjct: 183 DPSFGLKHLLQSGGNPLEF 201 >ref|XP_002329873.1| GRAS family transcription factor [Populus trichocarpa] gi|222871110|gb|EEF08241.1| GRAS family transcription factor [Populus trichocarpa] Length = 777 Score = 57.0 bits (136), Expect = 2e-06 Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 5/71 (7%) Frame = -2 Query: 206 SDLQPIAKALQVVNRG-----GTEDWESVLFESGASLIQEQSFLGWIMGKVEDPPSSLKH 42 ++LQPI L+ V+ G G EDWE++L E QEQSFL WI G V+D LK Sbjct: 107 TELQPIPSGLEFVSSGARCGLGLEDWENMLSEPS----QEQSFLRWIAGDVDDTQFGLKQ 162 Query: 41 LLQNGGGGLDF 9 LLQ+G L++ Sbjct: 163 LLQSGNNQLEY 173