BLASTX nr result

ID: Coptis21_contig00023078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023078
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333092.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_002333091.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43
gb|AFW90592.1| germin-like protein subfamily 1 member 20 precurs...   176   1e-42
ref|XP_002319674.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-42
ref|XP_003618164.1| Germin-like protein subfamily 1 member [Medi...   175   3e-42

>ref|XP_002333092.1| predicted protein [Populus trichocarpa] gi|222834858|gb|EEE73307.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  180 bits (456), Expect = 1e-43
 Identities = 89/112 (79%), Positives = 94/112 (83%)
 Frame = -3

Query: 456 HPRASEILICTEGTLYVGFVTSNPDYRLITKVLYQGDVFVFPVGLIHFQFNTGKTKAVAF 277
           HPRA+EIL   EGTLYVGFVTSNPD RLITKVL+ GDVFVFPVGLIHFQFN GKTKA A 
Sbjct: 114 HPRATEILTVLEGTLYVGFVTSNPDNRLITKVLHPGDVFVFPVGLIHFQFNVGKTKASAI 173

Query: 276 AGLSSQNPGVITIANSVFGTNPPISDDVLVKAFQVDKKVVDNLQAQFWMDIN 121
             LSSQNPGVITIAN+VFG+ PPI  DVL KAFQVDKK+VD LQ QFW D N
Sbjct: 174 GALSSQNPGVITIANAVFGSTPPIRSDVLAKAFQVDKKIVDYLQKQFWYDNN 225


>ref|XP_002333091.1| predicted protein [Populus trichocarpa] gi|222834857|gb|EEE73306.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  177 bits (450), Expect = 6e-43
 Identities = 88/112 (78%), Positives = 93/112 (83%)
 Frame = -3

Query: 456 HPRASEILICTEGTLYVGFVTSNPDYRLITKVLYQGDVFVFPVGLIHFQFNTGKTKAVAF 277
           HPRA+EIL   EGTLYVGFVTSNPD RLITKVL+ GDVFVFPVGLIHFQFN GKTKA A 
Sbjct: 114 HPRATEILTVLEGTLYVGFVTSNPDNRLITKVLHPGDVFVFPVGLIHFQFNVGKTKASAI 173

Query: 276 AGLSSQNPGVITIANSVFGTNPPISDDVLVKAFQVDKKVVDNLQAQFWMDIN 121
             LSSQNPGVITIAN+VFG+ PPI  DVL KAFQVDK +VD LQ QFW D N
Sbjct: 174 GALSSQNPGVITIANAVFGSTPPIRSDVLAKAFQVDKNIVDFLQKQFWYDNN 225


>gb|AFW90592.1| germin-like protein subfamily 1 member 20 precursor [Solanum
           tuberosum]
          Length = 228

 Score =  176 bits (447), Expect = 1e-42
 Identities = 86/116 (74%), Positives = 98/116 (84%), Gaps = 4/116 (3%)
 Frame = -3

Query: 456 HPRASEILICTEGTLYVGFVTSNPD----YRLITKVLYQGDVFVFPVGLIHFQFNTGKTK 289
           HPR +E+L   EGTLYVGFV SNP      +L TK+L+ GDVFVFP+GLIHFQFN GKTK
Sbjct: 113 HPRGTEVLTVLEGTLYVGFVLSNPGPNMKNKLFTKILHPGDVFVFPIGLIHFQFNVGKTK 172

Query: 288 AVAFAGLSSQNPGVITIANSVFGTNPPISDDVLVKAFQVDKKVVDNLQAQFWMDIN 121
           AVAFAGLSSQNPGVITIAN+VFG++PPI+DD+L KAFQVDKKVVD LQ+QFW D N
Sbjct: 173 AVAFAGLSSQNPGVITIANAVFGSDPPINDDILAKAFQVDKKVVDYLQSQFWWDNN 228


>ref|XP_002319674.1| predicted protein [Populus trichocarpa] gi|222858050|gb|EEE95597.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  176 bits (447), Expect = 1e-42
 Identities = 88/112 (78%), Positives = 92/112 (82%)
 Frame = -3

Query: 456 HPRASEILICTEGTLYVGFVTSNPDYRLITKVLYQGDVFVFPVGLIHFQFNTGKTKAVAF 277
           HPRA+EIL   EGTLYVGFVTSNPD RLITKVL  GDVFVFPVGLIHFQFN GKTKA A 
Sbjct: 114 HPRATEILTVLEGTLYVGFVTSNPDNRLITKVLNAGDVFVFPVGLIHFQFNVGKTKASAI 173

Query: 276 AGLSSQNPGVITIANSVFGTNPPISDDVLVKAFQVDKKVVDNLQAQFWMDIN 121
             LSSQNPGVITIAN+VFG+ PPI  DVL KAFQVDK +VD LQ QFW D N
Sbjct: 174 GALSSQNPGVITIANAVFGSTPPIRSDVLAKAFQVDKNIVDYLQKQFWYDNN 225


>ref|XP_003618164.1| Germin-like protein subfamily 1 member [Medicago truncatula]
           gi|355493179|gb|AES74382.1| Germin-like protein
           subfamily 1 member [Medicago truncatula]
          Length = 220

 Score =  175 bits (444), Expect = 3e-42
 Identities = 86/112 (76%), Positives = 95/112 (84%)
 Frame = -3

Query: 456 HPRASEILICTEGTLYVGFVTSNPDYRLITKVLYQGDVFVFPVGLIHFQFNTGKTKAVAF 277
           HPRA+EILI  EGTLYVGFVTSNP+ RLITKVL +GDVFVFP+GLIHFQ N G   AVA 
Sbjct: 109 HPRATEILIVLEGTLYVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAI 168

Query: 276 AGLSSQNPGVITIANSVFGTNPPISDDVLVKAFQVDKKVVDNLQAQFWMDIN 121
           AGLSSQNPGVITIAN+VFG+NP IS +VL KAFQVD  +VDNLQ QFW+D N
Sbjct: 169 AGLSSQNPGVITIANAVFGSNPKISSEVLTKAFQVDNNIVDNLQKQFWVDNN 220


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