BLASTX nr result

ID: Coptis21_contig00023076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023076
         (1383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532119.1| conserved hypothetical protein [Ricinus comm...   422   e-116
ref|XP_002283657.2| PREDICTED: uncharacterized membrane protein ...   417   e-114
emb|CBI20114.3| unnamed protein product [Vitis vinifera]              417   e-114
ref|XP_002317441.1| predicted protein [Populus trichocarpa] gi|2...   413   e-113
ref|XP_004137222.1| PREDICTED: uncharacterized membrane protein ...   410   e-112

>ref|XP_002532119.1| conserved hypothetical protein [Ricinus communis]
            gi|223528199|gb|EEF30259.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 320

 Score =  422 bits (1086), Expect = e-116
 Identities = 222/326 (68%), Positives = 258/326 (79%), Gaps = 3/326 (0%)
 Frame = -2

Query: 1352 MAFFSVIKTFHSP-PPFHLHPQNPSLHSLIP--SKPKLIKLHPSPKMLSFKAHSLPDSSF 1182
            MA    ++   SP PP   +     L  ++   S P L K+ P  K         P++  
Sbjct: 1    MALSIFLQVNPSPLPPSQFNKSTIRLKKILTLNSNPGLPKMLPQEKQTQ-----TPNAVS 55

Query: 1181 QTTVISTVFDLIQTSPPTWASSIFNNVLIFTFGSPILVTGLSLSGIATAFLLGTLTWRAF 1002
                +S   +LIQ++PPTW S++ NNVLIF  GSPIL++GLSLSGI  AFLLGTLTWRAF
Sbjct: 56   MQGALSGAMNLIQSAPPTWQSALVNNVLIFILGSPILLSGLSLSGICAAFLLGTLTWRAF 115

Query: 1001 GPTGFLLVATYFVFGTAATKVKMAQKEALGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIY 822
            GP+GFLLVA YFV GTAATKVKMAQKEA GVAEKRKGRRGPGSVIGSSAAGCVCAFLSIY
Sbjct: 116  GPSGFLLVACYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIY 175

Query: 821  GVGGAAFSSLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTSFKVVPRGTEGAVSVEG 642
            GVGG AFS LW+LGFVASFCTKLSDTVSSEIGKAYGK TYLVT+FK+VPRGTEGAVSVEG
Sbjct: 176  GVGGEAFSRLWELGFVASFCTKLSDTVSSEIGKAYGKITYLVTTFKIVPRGTEGAVSVEG 235

Query: 641  TIAGILASILLAYVGCLVGEVNAVEAAICVVASQIANLGESMIGAILQDKEGFKWLNNDA 462
            T+AG+LASILLA +GC +GE++  EA ICV+ASQIAN+GES+IGA  Q+KEGF+WLNND 
Sbjct: 236  TLAGLLASILLASIGCFLGEIHIPEAVICVIASQIANVGESIIGATFQEKEGFRWLNNDV 295

Query: 461  VNVINISLGSILAVLIQQTVTQNWHQ 384
            VNV+NIS+GSILAVL+QQ + QN H+
Sbjct: 296  VNVLNISIGSILAVLMQQ-LLQNLHK 320


>ref|XP_002283657.2| PREDICTED: uncharacterized membrane protein sll0875-like [Vitis
            vinifera]
          Length = 315

 Score =  417 bits (1073), Expect = e-114
 Identities = 218/275 (79%), Positives = 238/275 (86%), Gaps = 1/275 (0%)
 Frame = -2

Query: 1229 PKM-LSFKAHSLPDSSFQTTVISTVFDLIQTSPPTWASSIFNNVLIFTFGSPILVTGLSL 1053
            PKM L+ KA   P   F+  V S    LIQ+SP TW S++ NN LIF  G+PILV+GLSL
Sbjct: 37   PKMPLTAKALPNPVPGFRGAV-SEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSL 95

Query: 1052 SGIATAFLLGTLTWRAFGPTGFLLVATYFVFGTAATKVKMAQKEALGVAEKRKGRRGPGS 873
            SGIA AFLLGTLTWRAFG  GFLLVATYFV GTAATKVKMAQKEA GVAEKRKGRRGPGS
Sbjct: 96   SGIAAAFLLGTLTWRAFGSPGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGS 155

Query: 872  VIGSSAAGCVCAFLSIYGVGGAAFSSLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT 693
            VIGSSAAGCVCAFLSIYGVGG AF  LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT
Sbjct: 156  VIGSSAAGCVCAFLSIYGVGGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT 215

Query: 692  SFKVVPRGTEGAVSVEGTIAGILASILLAYVGCLVGEVNAVEAAICVVASQIANLGESMI 513
            + K+VPRGTEGAVS EGT AG+LASILLA+VGCL+G+++AVEA ICVVA+QIANLGES I
Sbjct: 216  TLKIVPRGTEGAVSAEGTSAGLLASILLAFVGCLMGQIDAVEAVICVVAAQIANLGESFI 275

Query: 512  GAILQDKEGFKWLNNDAVNVINISLGSILAVLIQQ 408
            GA LQ KEGF+WLNND VNVINIS+GSILA+LIQ+
Sbjct: 276  GAALQGKEGFRWLNNDVVNVINISMGSILAILIQK 310


>emb|CBI20114.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  417 bits (1073), Expect = e-114
 Identities = 218/275 (79%), Positives = 238/275 (86%), Gaps = 1/275 (0%)
 Frame = -2

Query: 1229 PKM-LSFKAHSLPDSSFQTTVISTVFDLIQTSPPTWASSIFNNVLIFTFGSPILVTGLSL 1053
            PKM L+ KA   P   F+  V S    LIQ+SP TW S++ NN LIF  G+PILV+GLSL
Sbjct: 384  PKMPLTAKALPNPVPGFRGAV-SEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSL 442

Query: 1052 SGIATAFLLGTLTWRAFGPTGFLLVATYFVFGTAATKVKMAQKEALGVAEKRKGRRGPGS 873
            SGIA AFLLGTLTWRAFG  GFLLVATYFV GTAATKVKMAQKEA GVAEKRKGRRGPGS
Sbjct: 443  SGIAAAFLLGTLTWRAFGSPGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGS 502

Query: 872  VIGSSAAGCVCAFLSIYGVGGAAFSSLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT 693
            VIGSSAAGCVCAFLSIYGVGG AF  LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT
Sbjct: 503  VIGSSAAGCVCAFLSIYGVGGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT 562

Query: 692  SFKVVPRGTEGAVSVEGTIAGILASILLAYVGCLVGEVNAVEAAICVVASQIANLGESMI 513
            + K+VPRGTEGAVS EGT AG+LASILLA+VGCL+G+++AVEA ICVVA+QIANLGES I
Sbjct: 563  TLKIVPRGTEGAVSAEGTSAGLLASILLAFVGCLMGQIDAVEAVICVVAAQIANLGESFI 622

Query: 512  GAILQDKEGFKWLNNDAVNVINISLGSILAVLIQQ 408
            GA LQ KEGF+WLNND VNVINIS+GSILA+LIQ+
Sbjct: 623  GAALQGKEGFRWLNNDVVNVINISMGSILAILIQK 657


>ref|XP_002317441.1| predicted protein [Populus trichocarpa] gi|222860506|gb|EEE98053.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  413 bits (1062), Expect = e-113
 Identities = 205/255 (80%), Positives = 233/255 (91%)
 Frame = -2

Query: 1172 VISTVFDLIQTSPPTWASSIFNNVLIFTFGSPILVTGLSLSGIATAFLLGTLTWRAFGPT 993
            V+S   +LIQ++ PTW S++F+N+LIF  GSPILV+GLSLSGI  A+LLGTLTWRAFG +
Sbjct: 14   VLSDAMNLIQSAHPTWKSALFSNLLIFVVGSPILVSGLSLSGIFAAYLLGTLTWRAFGAS 73

Query: 992  GFLLVATYFVFGTAATKVKMAQKEALGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVG 813
            GFLLVA+YFV GTA TKVKMAQKEA GVAEKRKGRRGPGSVIGSSAAGCVCAFLSI+G G
Sbjct: 74   GFLLVASYFVIGTAVTKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIFGTG 133

Query: 812  GAAFSSLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTSFKVVPRGTEGAVSVEGTIA 633
            G AF +LWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT+FKVVPRGTEGAVS EGT+A
Sbjct: 134  GRAFIALWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSAEGTLA 193

Query: 632  GILASILLAYVGCLVGEVNAVEAAICVVASQIANLGESMIGAILQDKEGFKWLNNDAVNV 453
            G+LASILLA +GC++GE+NA EA ICV+ASQIAN+GES+IGA  Q+KEGF+WLNNDAVNV
Sbjct: 194  GLLASILLASIGCILGEINAPEAVICVIASQIANVGESIIGAAFQEKEGFQWLNNDAVNV 253

Query: 452  INISLGSILAVLIQQ 408
            INIS+GSILAVL+QQ
Sbjct: 254  INISVGSILAVLMQQ 268


>ref|XP_004137222.1| PREDICTED: uncharacterized membrane protein sll0875-like [Cucumis
            sativus] gi|449517377|ref|XP_004165722.1| PREDICTED:
            uncharacterized membrane protein sll0875-like [Cucumis
            sativus]
          Length = 313

 Score =  410 bits (1054), Expect = e-112
 Identities = 214/307 (69%), Positives = 251/307 (81%), Gaps = 2/307 (0%)
 Frame = -2

Query: 1316 PPPFHLHPQNPSLHSL-IPSKPKLIKLHPSPKM-LSFKAHSLPDSSFQTTVISTVFDLIQ 1143
            P P  L P+      L  P KP + K +P+P   +  +A S        T+ S   +L+Q
Sbjct: 10   PFPLLLSPKRHQFPLLPFPLKPLITKSNPNPSSKMVVRAQSFE------TLASGAVNLLQ 63

Query: 1142 TSPPTWASSIFNNVLIFTFGSPILVTGLSLSGIATAFLLGTLTWRAFGPTGFLLVATYFV 963
            ++P TW S++ +N+LIF  GSPILV+GLS SGIA+AFLLGTLTWRAFGP+GFLLVATYFV
Sbjct: 64   SNPATWHSALLSNLLIFLLGSPILVSGLSPSGIASAFLLGTLTWRAFGPSGFLLVATYFV 123

Query: 962  FGTAATKVKMAQKEALGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGAAFSSLWQL 783
             GTAATKVKMAQKEA GVAEKRKGRRGPGSVIGSSAAGCVCA L I  VGG AF+ LW+L
Sbjct: 124  IGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAVLMINKVGGEAFAQLWRL 183

Query: 782  GFVASFCTKLSDTVSSEIGKAYGKTTYLVTSFKVVPRGTEGAVSVEGTIAGILASILLAY 603
            GFVASFCTKLSDTVSSEIGKAYG+ TYLVT+FKVVPRGTEGAVS+EGT AG+LA+I LA+
Sbjct: 184  GFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLEGTFAGLLAAIALAF 243

Query: 602  VGCLVGEVNAVEAAICVVASQIANLGESMIGAILQDKEGFKWLNNDAVNVINISLGSILA 423
            VGCL+G+V A EA +CV+ASQIANLGES+IGA+LQ+KEGF+WLNND VNVINIS+GSILA
Sbjct: 244  VGCLLGDVTASEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMGSILA 303

Query: 422  VLIQQTV 402
            VL+QQ +
Sbjct: 304  VLMQQLI 310


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