BLASTX nr result

ID: Coptis21_contig00023069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023069
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631223.1| PREDICTED: protein NIM1-INTERACTING 2-like [...    66   3e-09
ref|XP_003631222.1| PREDICTED: uncharacterized protein LOC100243...    60   2e-07
ref|XP_002312395.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_003631223.1| PREDICTED: protein NIM1-INTERACTING 2-like [Vitis vinifera]
          Length = 103

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = +1

Query: 256 FFAIIRRFHSAVRYFKKENDKGKGKLTEKSVSWKPDFVVRELE-ECNGVVKNKGKREERV 432
           FFAI+RR H AV+YF  EN  G G   ++   WKP F   + + E N V   K K+EE V
Sbjct: 30  FFAILRRIHVAVKYF--ENSNGPGMAAKR---WKPSFEREDFQVEANDVKIGKKKKEEGV 84

Query: 433 EENVGLDLNLDPESD 477
           EEN GLDLN+ PE++
Sbjct: 85  EENKGLDLNVGPETE 99


>ref|XP_003631222.1| PREDICTED: uncharacterized protein LOC100243974 [Vitis vinifera]
           gi|147785689|emb|CAN70911.1| hypothetical protein
           VITISV_043913 [Vitis vinifera]
          Length = 121

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 43/118 (36%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
 Frame = +1

Query: 127 ESEKRK-REVEINETKTKKRGDNRDQXXXXXXXXXXXXXXXXXXFFAIIRRFHSAVRYFK 303
           E+EKRK +E +I    T K+  + D                   F+AI+RR H+AV YF+
Sbjct: 2   EAEKRKNKENDIVSGPTPKKARDLDPGETAVNDDEVEE------FYAILRRIHAAVTYFE 55

Query: 304 KENDKGKGKLTEKSVSWKPDFVVRELEECNGVVKNKGKREERVEENVGLDLNLDPESD 477
           K    G+ +   K   W+       LEE  G    K KR E VEENVG DLN++P  D
Sbjct: 56  KGTGDGR-RSPVKGSKWRQGLEKEILEEVKGAGGEKLKRIEDVEENVGFDLNVNPGFD 112


>ref|XP_002312395.1| predicted protein [Populus trichocarpa] gi|222852215|gb|EEE89762.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
 Frame = +1

Query: 256 FFAIIRRFHSAVRYFKKENDKGKGKLTEKSVSWKPDFVVRELE-----ECNGVVKNKGKR 420
           FFAI+ R H AV+YFK+ N+ G+  L E          VR LE     E +G+  +  K+
Sbjct: 44  FFAILERIHVAVKYFKEANEDGRN-LAE----------VRSLESGLEVEGSGMKVSDIKK 92

Query: 421 EERVEENVGLDLNLDPESD 477
           EE VEENVG DLN DPE +
Sbjct: 93  EEGVEENVGFDLNADPEPE 111


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