BLASTX nr result

ID: Coptis21_contig00023063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023063
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274272.1| PREDICTED: uncharacterized protein LOC100244...   258   1e-66
gb|AFK37947.1| unknown [Lotus japonicus]                              240   2e-61
ref|NP_001235611.1| uncharacterized protein LOC100527917 [Glycin...   234   9e-60
ref|XP_002306992.1| predicted protein [Populus trichocarpa] gi|2...   232   6e-59
ref|XP_002510713.1| conserved hypothetical protein [Ricinus comm...   229   3e-58

>ref|XP_002274272.1| PREDICTED: uncharacterized protein LOC100244433 [Vitis vinifera]
           gi|297745586|emb|CBI40751.3| unnamed protein product
           [Vitis vinifera]
          Length = 167

 Score =  258 bits (658), Expect = 1e-66
 Identities = 121/168 (72%), Positives = 142/168 (84%)
 Frame = +3

Query: 48  METSLRCDGNSNSLTIHAKEKIPVIDSQTFLQVHAGLDTQVGAPIYCGTIIRHFYPELSA 227
           METSLR  G++ +L IHAKEK P ID +T L V   LDT++GAP Y   +IRHFYP+LSA
Sbjct: 1   METSLRYGGDTKALRIHAKEKFP-IDLKTHLLVRGELDTRIGAPSYVSAVIRHFYPDLSA 59

Query: 228 SLGVGLRFDKQEQFRYTVRAKKAFPITSSGSLSLNIKGRCDADREFKERKGRGAAEFSWS 407
           SLGVGL++DK E+ RY+VR KK FP+T+ G LS N+KG+CD D+EF+ERK RGAAEFSWS
Sbjct: 60  SLGVGLQYDKHEKLRYSVRGKKTFPVTTDGLLSFNVKGQCDVDKEFRERKSRGAAEFSWS 119

Query: 408 IFNFQKDQDVRLKVGYELFDKVPYLQIRENNWTLNADSNGRWNVRFDL 551
           IFNFQ+DQDVR+KVGYE+FDKVPYLQIRENNWTLNAD NGRWNVRFDL
Sbjct: 120 IFNFQRDQDVRIKVGYEVFDKVPYLQIRENNWTLNADINGRWNVRFDL 167


>gb|AFK37947.1| unknown [Lotus japonicus]
          Length = 167

 Score =  240 bits (612), Expect = 2e-61
 Identities = 115/168 (68%), Positives = 135/168 (80%)
 Frame = +3

Query: 48  METSLRCDGNSNSLTIHAKEKIPVIDSQTFLQVHAGLDTQVGAPIYCGTIIRHFYPELSA 227
           METSLR  G+S +L IHAKEK+  ID+ TF QV   LDT+ G P     +IRHFYP LSA
Sbjct: 1   METSLRYAGDSKALRIHAKEKLR-IDTNTFFQVQGELDTRYGQPNSLRALIRHFYPNLSA 59

Query: 228 SLGVGLRFDKQEQFRYTVRAKKAFPITSSGSLSLNIKGRCDADREFKERKGRGAAEFSWS 407
           +LGVG+R+DK E+ RYTV AKK FP+T +G ++  IKG CD D+EFKERK RGAAEFSWS
Sbjct: 60  TLGVGMRYDKHEKLRYTVVAKKTFPVTINGLVNFKIKGGCDVDKEFKERKSRGAAEFSWS 119

Query: 408 IFNFQKDQDVRLKVGYELFDKVPYLQIRENNWTLNADSNGRWNVRFDL 551
           +FNFQKDQDVRL+VGYE+FD+VPYLQIRENNWT NAD  GRWNVR+DL
Sbjct: 120 VFNFQKDQDVRLRVGYEIFDQVPYLQIRENNWTFNADYKGRWNVRYDL 167


>ref|NP_001235611.1| uncharacterized protein LOC100527917 [Glycine max]
           gi|255633566|gb|ACU17142.1| unknown [Glycine max]
          Length = 167

 Score =  234 bits (598), Expect = 9e-60
 Identities = 109/168 (64%), Positives = 136/168 (80%)
 Frame = +3

Query: 48  METSLRCDGNSNSLTIHAKEKIPVIDSQTFLQVHAGLDTQVGAPIYCGTIIRHFYPELSA 227
           METSLR   +S +L IHAK+K+  IDS T+ Q+   LDT++G P     +IRHFYP LSA
Sbjct: 1   METSLRYGEDSKALRIHAKQKLR-IDSNTYFQLRGELDTRLGQPSSSSALIRHFYPSLSA 59

Query: 228 SLGVGLRFDKQEQFRYTVRAKKAFPITSSGSLSLNIKGRCDADREFKERKGRGAAEFSWS 407
           +LGVG+R+DK+++ RYTV AKK FP+T  G L+  IKG CD D++FKERK RGAAEFSW+
Sbjct: 60  TLGVGVRYDKRDKLRYTVSAKKTFPVTVDGLLNFKIKGGCDVDKDFKERKSRGAAEFSWN 119

Query: 408 IFNFQKDQDVRLKVGYELFDKVPYLQIRENNWTLNADSNGRWNVRFDL 551
           +FNFQKDQDVRL++GYE+FD+VPYLQIRENNWT+NAD  GRWNVR+DL
Sbjct: 120 VFNFQKDQDVRLRIGYEVFDQVPYLQIRENNWTVNADYKGRWNVRYDL 167


>ref|XP_002306992.1| predicted protein [Populus trichocarpa] gi|222856441|gb|EEE93988.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  232 bits (591), Expect = 6e-59
 Identities = 106/168 (63%), Positives = 133/168 (79%)
 Frame = +3

Query: 48  METSLRCDGNSNSLTIHAKEKIPVIDSQTFLQVHAGLDTQVGAPIYCGTIIRHFYPELSA 227
           METSLR   +S +L IHAKE+   IDS T LQVH  LDT++GAP Y   +IRHFYP+LSA
Sbjct: 1   METSLRYGVDSKALKIHAKERF-AIDSSTHLQVHGELDTRIGAPSYVSAMIRHFYPDLSA 59

Query: 228 SLGVGLRFDKQEQFRYTVRAKKAFPITSSGSLSLNIKGRCDADREFKERKGRGAAEFSWS 407
            LGVGL++DK E+ RY VR KK FP+T+ G +S N+KGRCD D+EFK+R  + AA+ SWS
Sbjct: 60  CLGVGLQYDKHEKLRYFVRGKKGFPVTNDGLISFNVKGRCDVDKEFKQRNSKAAADVSWS 119

Query: 408 IFNFQKDQDVRLKVGYELFDKVPYLQIRENNWTLNADSNGRWNVRFDL 551
           I+NF ++QDVR ++GYE+  KVPYLQI+ENNWTLNAD NG+WNV+FDL
Sbjct: 120 IYNFHREQDVRFRIGYEVITKVPYLQIKENNWTLNADMNGKWNVKFDL 167


>ref|XP_002510713.1| conserved hypothetical protein [Ricinus communis]
           gi|223551414|gb|EEF52900.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score =  229 bits (585), Expect = 3e-58
 Identities = 109/163 (66%), Positives = 131/163 (80%)
 Frame = +3

Query: 48  METSLRCDGNSNSLTIHAKEKIPVIDSQTFLQVHAGLDTQVGAPIYCGTIIRHFYPELSA 227
           METS+R  G+S +L IHAK+K P  DSQT LQVH  LDT++GAP Y   +IR FYP+LSA
Sbjct: 1   METSMRYGGDSKALKIHAKQKFPP-DSQTQLQVHGVLDTRIGAPSYVSAMIRRFYPDLSA 59

Query: 228 SLGVGLRFDKQEQFRYTVRAKKAFPITSSGSLSLNIKGRCDADREFKERKGRGAAEFSWS 407
           SLGVG+++DKQE+  Y +R KKAFP+TS G L+ N+KG C  D+EFKERK  GAAEFSWS
Sbjct: 60  SLGVGVQYDKQEKLTYRLRGKKAFPVTSDGLLTFNVKGWCTIDKEFKERKSEGAAEFSWS 119

Query: 408 IFNFQKDQDVRLKVGYELFDKVPYLQIRENNWTLNADSNGRWN 536
            FNFQ+DQDVR KVGY++ +KVPY+QIRENNWTLNAD  GRWN
Sbjct: 120 KFNFQRDQDVRFKVGYKVTEKVPYMQIRENNWTLNADLKGRWN 162


Top