BLASTX nr result
ID: Coptis21_contig00023058
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00023058
(591 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [S... 68 3e-23
gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze... 69 1e-20
gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japo... 68 2e-20
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi... 68 2e-19
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ... 68 2e-19
>ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [Sorghum bicolor]
gi|241941323|gb|EES14468.1| hypothetical protein
SORBIDRAFT_07g002160 [Sorghum bicolor]
Length = 469
Score = 68.2 bits (165), Expect(2) = 3e-23
Identities = 35/95 (36%), Positives = 49/95 (51%)
Frame = -2
Query: 587 GASKIWQGILKARDEILPKLCWHIGTGTNIDIWLDPWIPTLPYNKPMGPMPPVGPYRCVA 408
G S W+ I++ + L W +G GT I+IW DPWIP +P P V+
Sbjct: 68 GISYAWRSIVRGVQALKDGLIWRVGDGTQINIWTDPWIPQGVTRRPCTPRGQT-ILNKVS 126
Query: 407 DLIDPENRSW*RNVLDTIFLLTTVKEILKVPLSRQ 303
+LIDP + W RN++ IF VK IL +PL +
Sbjct: 127 ELIDPISGEWDRNLVTDIFWEADVKNILSIPLKNE 161
Score = 65.9 bits (159), Expect(2) = 3e-23
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Frame = -3
Query: 304 KNTM--TIRWSEETNGELTVKSVYKYLSESKNVDQKQN*------------QLWKSIWNL 167
KN M T+ W + G+ +VKS Y L++ K + +++ W IW L
Sbjct: 159 KNEMEDTLAWHYDPKGDFSVKSAYHVLTDMKELSKRRQIGEASASLISPCNNNWHKIWKL 218
Query: 166 NTAKKVKLFFWKAIRNSLPTRENLVNRNIISSAICPRCSNQVESTHHALFHC 11
+ KVKLFFW+ NSLP R N++ R + CP C E H C
Sbjct: 219 HCPPKVKLFFWRFTHNSLPLRMNILRRGMDIDTRCPVCWRLNEDGGHCFLRC 270
>gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays]
Length = 472
Score = 68.6 bits (166), Expect(2) = 1e-20
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Frame = -3
Query: 292 TIRWSEETNGELTVKSVYKYLSESK----NVDQKQN*Q-----LWKSIWNLNTAKKVKLF 140
T+ W + G +VKS Y S + N D + +WKSIWN+N K+K+F
Sbjct: 107 TLAWHGDPKGNFSVKSAYALASRRRDHHNNADASSSISGRGENVWKSIWNVNVTNKIKMF 166
Query: 139 FWKAIRNSLPTRENLVNRNIISSAICPRCSNQVESTHHALFHC 11
W+ NS P R N+ R I +CP C E H C
Sbjct: 167 LWRLAHNSHPVRVNIARRGIKIETLCPMCFRLDEDGGHLFLKC 209
Score = 56.6 bits (135), Expect(2) = 1e-20
Identities = 31/93 (33%), Positives = 47/93 (50%)
Frame = -2
Query: 590 RGASKIWQGILKARDEILPKLCWHIGTGTNIDIWLDPWIPTLPYNKPMGPMPPVGPYRCV 411
+G S W+ +LK + L W IG G ++IW+DPWIP + + P ++ V
Sbjct: 9 KGISYTWRNVLKGLHLLKEGLIWRIGDGNQVNIWVDPWIPRGETRRVITPRNGSLLHK-V 67
Query: 410 ADLIDPENRSW*RNVLDTIFLLTTVKEILKVPL 312
A+LIDP SW ++ FL IL +P+
Sbjct: 68 AELIDPITGSWDCRLVRDTFLQEDADCILAIPI 100
>gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japonica Group]
Length = 613
Score = 68.2 bits (165), Expect(2) = 2e-20
Identities = 38/103 (36%), Positives = 53/103 (51%)
Frame = -2
Query: 587 GASKIWQGILKARDEILPKLCWHIGTGTNIDIWLDPWIPTLPYNKPMGPMPPVGPYRCVA 408
G S W+ I++ + L W +G GT+ID+W DPWIP +P+ P + VA
Sbjct: 147 GISYSWRSIVRGVQVLKVGLIWRVGDGTDIDMWNDPWIPLGTTKRPITPRRGI-VLNKVA 205
Query: 407 DLIDPENRSW*RNVLDTIFLLTTVKEILKVPLSRQEHNDYQMV 279
DLI+P W R ++ IF VK IL +P+ HN Y V
Sbjct: 206 DLINPITGEWDRELIQDIFWEEDVKNILAIPV----HNGYSDV 244
Score = 56.2 bits (134), Expect(2) = 2e-20
Identities = 32/103 (31%), Positives = 42/103 (40%), Gaps = 12/103 (11%)
Frame = -3
Query: 283 WSEETNGELTVKSVYKYLS------------ESKNVDQKQN*QLWKSIWNLNTAKKVKLF 140
W + G +VKS Y L ES + W+ +W LN KVK F
Sbjct: 247 WHFDPRGIFSVKSAYHTLEYQRDRQAIRQTGESSSGKTSSAALQWEKLWRLNHLPKVKHF 306
Query: 139 FWKAIRNSLPTRENLVNRNIISSAICPRCSNQVESTHHALFHC 11
W+ NSLP R+N+ R + CP C E+ H F C
Sbjct: 307 LWRLAHNSLPLRQNISKRGMEIDTRCPVCLRLDENGGHCFFKC 349
>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 67.8 bits (164), Expect(2) = 2e-19
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Frame = -3
Query: 283 WSEETNGELTVKSVYKY---------LSESKNVDQKQN*QLWKSIWNLNTAKKVKLFFWK 131
W E +G TVKS YK + S + ++W +WN KVK+F WK
Sbjct: 891 WHHEKSGLFTVKSAYKLAWNLSGKGVVQSSSSTATSGERKIWSRVWNAKVQAKVKIFIWK 950
Query: 130 AIRNSLPTRENLVNRNIISSAICPRCSNQVESTHHALFHC 11
++ LPT EN R I + CP C + E+++HA C
Sbjct: 951 LAQDKLPTWENKRRRKIEMNGTCPVCGTKGENSYHATVEC 990
Score = 53.5 bits (127), Expect(2) = 2e-19
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = -2
Query: 584 ASKIWQGILKARDEILPKLCWHIGTGTNIDIWLDPWIPTLPYNKPMGPMPPVGPYRC--V 411
+S +W+GI D + W +G G NI IW W+ P+ + + + G R V
Sbjct: 791 SSSVWKGIQHGLDLLKQGTIWRVGNGHNIKIWRHKWV---PHGEHINVLEKKGRNRLIYV 847
Query: 410 ADLIDPENRSW*RNVLDTIFLLTTVKEILKVPLSRQEHNDYQMVRGNKWGI 258
+LI+ ENR W ++ + E+LK+ L + +D+ K G+
Sbjct: 848 NELINEENRCWNETLVRHVLKEEDANEVLKIRLPNHQMDDFPAWHHEKSGL 898
>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 67.8 bits (164), Expect(2) = 2e-19
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Frame = -3
Query: 283 WSEETNGELTVKSVYKY---------LSESKNVDQKQN*QLWKSIWNLNTAKKVKLFFWK 131
W E +G TVKS YK + S + ++W +WN KVK+F WK
Sbjct: 916 WHHEKSGLFTVKSAYKLAWNLSGKGVVQSSSSTATSGERKIWSRVWNAKVQAKVKIFIWK 975
Query: 130 AIRNSLPTRENLVNRNIISSAICPRCSNQVESTHHALFHC 11
++ LPT EN R I + CP C + E+++HA C
Sbjct: 976 LAQDKLPTWENKRRRKIEMNGTCPVCGTKGENSYHATVEC 1015
Score = 53.5 bits (127), Expect(2) = 2e-19
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = -2
Query: 584 ASKIWQGILKARDEILPKLCWHIGTGTNIDIWLDPWIPTLPYNKPMGPMPPVGPYRC--V 411
+S +W+GI D + W +G G NI IW W+ P+ + + + G R V
Sbjct: 816 SSSVWKGIQHGLDLLKQGTIWRVGNGHNIKIWRHKWV---PHGEHINVLEKKGRNRLIYV 872
Query: 410 ADLIDPENRSW*RNVLDTIFLLTTVKEILKVPLSRQEHNDYQMVRGNKWGI 258
+LI+ ENR W ++ + E+LK+ L + +D+ K G+
Sbjct: 873 NELINEENRCWNETLVRHVLKEEDANEVLKIRLPNHQMDDFPAWHHEKSGL 923