BLASTX nr result

ID: Coptis21_contig00023056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023056
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]    92   3e-17
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]    92   6e-17
emb|CAN78431.1| hypothetical protein VITISV_022851 [Vitis vinifera]    91   7e-17
ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256...    91   1e-16
emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]    89   5e-16

>emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]
          Length = 1905

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/127 (39%), Positives = 67/127 (52%)
 Frame = -3

Query: 404  GCGVWRAILKVLPLFLRGIRYSFATGEEILFWEDHWTDDGALASAFPLLFGLSRFKGKPI 225
            G GVW+AI K    F    R+    G  + FW+D W  + +L  AFP+LF LS  K   +
Sbjct: 1603 GVGVWKAIRKGWENFRSHSRFIIGDGTRVKFWKDLWCGNQSLEEAFPILFNLSVNKEGWV 1662

Query: 224  SDCMVRSEGGISWNLGLRRALNDWEIGDLASLMARLDVTIPYAQNGDKRVWCPSNKGIFS 45
            ++     EGG SW L   R LNDWE+G++ SL+++L          D   W  +  G FS
Sbjct: 1663 AEAWEEDEGGGSWGLRFNRHLNDWEVGEVESLLSKLHPLTIRRGVEDLFRWKENKNGTFS 1722

Query: 44   VKSFYFS 24
            VKSFY S
Sbjct: 1723 VKSFYSS 1729


>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
          Length = 4128

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 49/127 (38%), Positives = 67/127 (52%)
 Frame = -3

Query: 404  GCGVWRAILKVLPLFLRGIRYSFATGEEILFWEDHWTDDGALASAFPLLFGLSRFKGKPI 225
            G GVW+AI K    F    R+    G ++ FW+D W  + +L   FP+LF LS  K   +
Sbjct: 3315 GVGVWKAIRKGWENFRSHSRFIIGDGTKVKFWKDLWCGNQSLKETFPILFNLSVNKEGWV 3374

Query: 224  SDCMVRSEGGISWNLGLRRALNDWEIGDLASLMARLDVTIPYAQNGDKRVWCPSNKGIFS 45
            ++     EGG SW L   R LNDWE+G++ SL+++L          D   W  +  G FS
Sbjct: 3375 AEAWEEDEGGXSWGLRFNRHLNDWEVGEVESLLSKLHPLTIRRGVEDMFRWKENKIGTFS 3434

Query: 44   VKSFYFS 24
            VKSFY S
Sbjct: 3435 VKSFYSS 3441



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/102 (38%), Positives = 50/102 (49%)
 Frame = -3

Query: 326  EEILFWEDHWTDDGALASAFPLLFGLSRFKGKPISDCMVRSEGGISWNLGLRRALNDWEI 147
            + I FWED W  D  L   +P L  +   K  PIS  ++ S    SWN    R L+D EI
Sbjct: 3840 DRIWFWEDLWWGDQPLGVQYPRLLIVVTDKNTPISS-ILGSTRPFSWNFNFCRNLSDSEI 3898

Query: 146  GDLASLMARLDVTIPYAQNGDKRVWCPSNKGIFSVKSFYFSI 21
             DL  LM  LD         D R W  S  G+F+VKSF+ ++
Sbjct: 3899 EDLEGLMRSLDRLHISPSVPDMRSWSLSXXGLFTVKSFFLAL 3940


>emb|CAN78431.1| hypothetical protein VITISV_022851 [Vitis vinifera]
          Length = 1033

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 49/127 (38%), Positives = 66/127 (51%)
 Frame = -3

Query: 404 GCGVWRAILKVLPLFLRGIRYSFATGEEILFWEDHWTDDGALASAFPLLFGLSRFKGKPI 225
           G GVW+AI K    F    R+    G  + FW+D W  + +L  AFP+LF LS  K   +
Sbjct: 423 GVGVWKAIRKGWENFRSHSRFIIGDGTRVKFWKDLWCGNQSLEEAFPILFNLSVNKEGWV 482

Query: 224 SDCMVRSEGGISWNLGLRRALNDWEIGDLASLMARLDVTIPYAQNGDKRVWCPSNKGIFS 45
           ++     EGG SW     R LNDWE+G++ SL+++L          D   W  +  G FS
Sbjct: 483 AEAWEEDEGGGSWGFRFNRHLNDWEVGEVESLLSKLHPLTIRRGVEDLLRWKENKNGTFS 542

Query: 44  VKSFYFS 24
           VKSFY S
Sbjct: 543 VKSFYSS 549


>ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
          Length = 2667

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 49/127 (38%), Positives = 67/127 (52%)
 Frame = -3

Query: 404  GCGVWRAILKVLPLFLRGIRYSFATGEEILFWEDHWTDDGALASAFPLLFGLSRFKGKPI 225
            G GVW+AI K    F    R+    G ++ FW+D W  + +L   FP+LF LS  K   +
Sbjct: 914  GVGVWKAIRKGWENFRSHSRFIIGDGTKVKFWKDLWCGNQSLKETFPILFNLSVNKEGWV 973

Query: 224  SDCMVRSEGGISWNLGLRRALNDWEIGDLASLMARLDVTIPYAQNGDKRVWCPSNKGIFS 45
            ++     EGG SW L   R LNDWE+G++ SL+++L          D   W  +  G FS
Sbjct: 974  AEAWEEDEGGGSWGLRFNRHLNDWEVGEVESLLSKLHPLTIRRGVEDMFRWKENKIGTFS 1033

Query: 44   VKSFYFS 24
            VKSFY S
Sbjct: 1034 VKSFYSS 1040


>emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]
          Length = 2095

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/125 (35%), Positives = 62/125 (49%)
 Frame = -3

Query: 404  GCGVWRAILKVLPLFLRGIRYSFATGEEILFWEDHWTDDGALASAFPLLFGLSRFKGKPI 225
            G G+W+AI K   LF   + +    G+ + FW+D W  DG L  +FP LF +S  K   +
Sbjct: 1794 GVGLWKAIRKKWGLFDGRVAFHLGNGQRVKFWKDKWCGDGPLCESFPSLFSISMSKNAWV 1853

Query: 224  SDCMVRSEGGISWNLGLRRALNDWEIGDLASLMARLDVTIPYAQNGDKRVWCPSNKGIFS 45
            SD       GI W     RA NDWEI  L  L+ ++       +  D+ +W  S  G+FS
Sbjct: 1854 SDVWNPVGDGIGWTPLFARAFNDWEIILLERLLQKIQAXRVQREEEDRVIWTASKDGVFS 1913

Query: 44   VKSFY 30
            V+  Y
Sbjct: 1914 VRXLY 1918


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