BLASTX nr result

ID: Coptis21_contig00023041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023041
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277937.1| PREDICTED: putative axial regulator YABBY 2 ...   226   7e-57
gb|AFY26892.1| YABBY2-like transcription factor YAB2 [Morella ru...   211   3e-52
gb|ADL36868.1| YABBY domain class transcription factor [Malus x ...   206   1e-50
ref|XP_002299655.1| predicted protein [Populus trichocarpa] gi|2...   205   2e-50
gb|ABK95415.1| unknown [Populus trichocarpa]                          205   2e-50

>ref|XP_002277937.1| PREDICTED: putative axial regulator YABBY 2 [Vitis vinifera]
            gi|296084019|emb|CBI24407.3| unnamed protein product
            [Vitis vinifera]
          Length = 183

 Score =  226 bits (577), Expect = 7e-57
 Identities = 118/187 (63%), Positives = 124/187 (66%)
 Frame = +1

Query: 442  MSLDVTPERVCYVHCNFCNTILAVSVPCTSLFNVVTVGCGHCANLLSVNMKALEXXXXXX 621
            MSLD+TPERVCYVHCNFCNTILAVSVPCTSLF +VTV CGHCANLLSVNM AL       
Sbjct: 1    MSLDITPERVCYVHCNFCNTILAVSVPCTSLFTIVTVRCGHCANLLSVNMGAL----LQT 56

Query: 622  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRMLPIRPPEKRQRVPSAY 801
                                                     PRM PIRPPEKRQRVPSAY
Sbjct: 57   VPTQDLQSQKQQLSCGDPSEDCGSSSKCNKFSAFESAEHEQPRMPPIRPPEKRQRVPSAY 116

Query: 802  NRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLMMDGNKRLKVGDALAVEGT 981
            NRFIKEEIQRIKASNPDI+HREAFSTAAKNWAHFPHIHFGL +DGNK+ K+  A A EG 
Sbjct: 117  NRFIKEEIQRIKASNPDITHREAFSTAAKNWAHFPHIHFGLKLDGNKQGKLDQAFAGEGP 176

Query: 982  QKTQEFY 1002
             K   FY
Sbjct: 177  HKAHGFY 183


>gb|AFY26892.1| YABBY2-like transcription factor YAB2 [Morella rubra]
          Length = 181

 Score =  211 bits (537), Expect = 3e-52
 Identities = 115/191 (60%), Positives = 123/191 (64%), Gaps = 4/191 (2%)
 Frame = +1

Query: 442  MSLDV--TPERVCYVHCNFCNTILAVSVPCTSLFNVVTVGCGHCANLLSVNMKALEXXXX 615
            MSLD+    ERVCYVHCNFCNTILAVSVPC+SLF +VTV CGHCANLLSVNM A      
Sbjct: 1    MSLDMMMASERVCYVHCNFCNTILAVSVPCSSLFTIVTVRCGHCANLLSVNMGA------ 54

Query: 616  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRMLPIRPPEKRQRVPS 795
                                                       PRM PIRPPEKRQRVPS
Sbjct: 55   ----SLQAVPPQDSQKQHVISEDCGSSSKCNKFSAFETVEHEQPRMPPIRPPEKRQRVPS 110

Query: 796  AYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLMMDGNKRLKVGDALA-- 969
            AYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL +DGNK+ K+   LA  
Sbjct: 111  AYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDQTLAGS 170

Query: 970  VEGTQKTQEFY 1002
             +GTQ +  FY
Sbjct: 171  DQGTQNSNGFY 181


>gb|ADL36868.1| YABBY domain class transcription factor [Malus x domestica]
          Length = 194

 Score =  206 bits (523), Expect = 1e-50
 Identities = 110/194 (56%), Positives = 120/194 (61%), Gaps = 7/194 (3%)
 Frame = +1

Query: 442  MSLDV-TPERVCYVHCNFCNTILAVSVPCTSLFNVVTVGCGHCANLLSVNM------KAL 600
            MS+D+   ERVCYVHCNFCNTILAVSVPC S  N+VTV CGHCANLLSVN+        +
Sbjct: 1    MSMDLMASERVCYVHCNFCNTILAVSVPCNSSMNMVTVRCGHCANLLSVNIGGSLQSTTI 60

Query: 601  EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRMLPIRPPEKR 780
                                                            PR+ PIRPPEKR
Sbjct: 61   PPHQDPQKQHLSSEDSNKNCGSSSSSSSSSSKSNKFGHAFESLELHDQPRISPIRPPEKR 120

Query: 781  QRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLMMDGNKRLKVGD 960
            QRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL +D N+  K+  
Sbjct: 121  QRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDANREPKLDQ 180

Query: 961  ALAVEGTQKTQEFY 1002
            A A EGTQK+  FY
Sbjct: 181  AFAGEGTQKSNGFY 194


>ref|XP_002299655.1| predicted protein [Populus trichocarpa] gi|222846913|gb|EEE84460.1|
            predicted protein [Populus trichocarpa]
          Length = 185

 Score =  205 bits (522), Expect = 2e-50
 Identities = 111/188 (59%), Positives = 118/188 (62%), Gaps = 1/188 (0%)
 Frame = +1

Query: 442  MSLDVTPERVCYVHCNFCNTILAVSVPCTSLFNVVTVGCGHCANLLSVNMKALEXXXXXX 621
            MSL++  E VCYVHCN CNTILAVSVP +SLFN+VTV CGHC NLLSVNM A        
Sbjct: 1    MSLELVSEPVCYVHCNLCNTILAVSVPSSSLFNIVTVRCGHCGNLLSVNMGA---SLQTL 57

Query: 622  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRMLPIRPPEKRQRVPSAY 801
                                                    PPRM  IRPPEKRQRVPSAY
Sbjct: 58   PLQDPQSQKLLLINSEDLNKNFGSSSKCNKVTASESTEHEPPRMPAIRPPEKRQRVPSAY 117

Query: 802  NRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLMMDGNKRLKVG-DALAVEG 978
            NRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL +D NK  K+   + A EG
Sbjct: 118  NRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDSNKHAKLDHQSFAGEG 177

Query: 979  TQKTQEFY 1002
            TQKT   Y
Sbjct: 178  TQKTSGLY 185


>gb|ABK95415.1| unknown [Populus trichocarpa]
          Length = 191

 Score =  205 bits (522), Expect = 2e-50
 Identities = 111/188 (59%), Positives = 118/188 (62%), Gaps = 1/188 (0%)
 Frame = +1

Query: 442  MSLDVTPERVCYVHCNFCNTILAVSVPCTSLFNVVTVGCGHCANLLSVNMKALEXXXXXX 621
            MSL++  E VCYVHCN CNTILAVSVP +SLFN+VTV CGHC NLLSVNM A        
Sbjct: 1    MSLELVSEPVCYVHCNLCNTILAVSVPSSSLFNIVTVRCGHCGNLLSVNMGA---SLQTL 57

Query: 622  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRMLPIRPPEKRQRVPSAY 801
                                                    PPRM  IRPPEKRQRVPSAY
Sbjct: 58   PLQDPQSQKLLLINSEDLNKNFGSSSKCNKVTASESTEHEPPRMPAIRPPEKRQRVPSAY 117

Query: 802  NRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLMMDGNKRLKVG-DALAVEG 978
            NRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL +D NK  K+   + A EG
Sbjct: 118  NRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDSNKHAKLDHQSFAGEG 177

Query: 979  TQKTQEFY 1002
            TQKT   Y
Sbjct: 178  TQKTSGLY 185


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