BLASTX nr result

ID: Coptis21_contig00023038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023038
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199361.1| uncharacterized protein [Arabidopsis thaliana] ...    57   1e-06
ref|NP_199360.1| uncharacterized protein [Arabidopsis thaliana] ...    56   3e-06
ref|XP_002863478.1| hypothetical protein ARALYDRAFT_494437 [Arab...    56   3e-06

>ref|NP_199361.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758738|dbj|BAB09176.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007874|gb|AED95257.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 877

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/56 (44%), Positives = 34/56 (60%)
 Frame = +3

Query: 186 IPEQIKKIWNVWDIRIFIXXXXXXXXXXXXFAPLRRRNQHRLLVHFLWSAYLLADW 353
           IP+ IK IW+ W IR  +            FAP R+R+  ++L+ F+WSAYLLADW
Sbjct: 5   IPKPIKDIWDEWSIRSTLIFSLSLQTFLIFFAPQRKRSSRKVLLSFIWSAYLLADW 60


>ref|NP_199360.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758737|dbj|BAB09175.1| unnamed protein product
           [Arabidopsis thaliana] gi|110742213|dbj|BAE99033.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332007873|gb|AED95256.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 866

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/56 (42%), Positives = 34/56 (60%)
 Frame = +3

Query: 186 IPEQIKKIWNVWDIRIFIXXXXXXXXXXXXFAPLRRRNQHRLLVHFLWSAYLLADW 353
           IP+ IK +W+ W+IR  +            F+PLR+R   RLL+  +WS+YLLADW
Sbjct: 5   IPKHIKDVWDRWNIRGAVILSLTLQAILICFSPLRKRTPRRLLIVLVWSSYLLADW 60


>ref|XP_002863478.1| hypothetical protein ARALYDRAFT_494437 [Arabidopsis lyrata subsp.
           lyrata] gi|297309313|gb|EFH39737.1| hypothetical protein
           ARALYDRAFT_494437 [Arabidopsis lyrata subsp. lyrata]
          Length = 838

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/56 (42%), Positives = 34/56 (60%)
 Frame = +3

Query: 186 IPEQIKKIWNVWDIRIFIXXXXXXXXXXXXFAPLRRRNQHRLLVHFLWSAYLLADW 353
           IP+ IK +W+ W+IR  +            F+PLR+R   RLL+  +WS+YLLADW
Sbjct: 5   IPKHIKDVWDRWNIRGAVILSLTLQAILICFSPLRKRTPRRLLIVLVWSSYLLADW 60


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