BLASTX nr result

ID: Coptis21_contig00023035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023035
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63578.1| hypothetical protein VITISV_002837 [Vitis vinifera]   148   5e-34
emb|CBI26412.3| unnamed protein product [Vitis vinifera]              134   8e-30
ref|XP_003620138.1| Mitochondrial protein, putative [Medicago tr...   133   2e-29
gb|AAR87370.1| expressed protein [Oryza sativa Japonica Group] g...   116   2e-24
gb|EEC67219.1| hypothetical protein OsI_34122 [Oryza sativa Indi...   116   2e-24

>emb|CAN63578.1| hypothetical protein VITISV_002837 [Vitis vinifera]
          Length = 516

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/123 (59%), Positives = 89/123 (72%), Gaps = 4/123 (3%)
 Frame = -1

Query: 432 LSLHKKLPTFQNICTVVKVITKRILSYNHLAQMKYVFPEAIQIE---IHS-QDLCMTPDM 265
           L L KK  TFQNICT V+++TKR  SY HLAQ+KY+ PE +Q +   IH  + LCM PDM
Sbjct: 174 LGLRKKPTTFQNICTQVEILTKRKFSYRHLAQIKYILPEVVQXDYILIHDVKSLCMKPDM 233

Query: 264 KITLLFDAVEIHPNQSPFKALRQVFHERLLDFFKIHSESCDIPEAMLPEPFSQRNHTALP 85
           KI+LLFD +E H  +S F ALRQVF  RLLDFF  H E CDIPEA+LPEPF+QR    +P
Sbjct: 234 KISLLFDVIEGHQEKSTFMALRQVFAYRLLDFFNXHPEGCDIPEAILPEPFNQRTQNIIP 293

Query: 84  RSM 76
           +S+
Sbjct: 294 KSL 296


>emb|CBI26412.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  134 bits (337), Expect = 8e-30
 Identities = 75/158 (47%), Positives = 91/158 (57%), Gaps = 39/158 (24%)
 Frame = -1

Query: 432 LSLHKKLPTFQNICTVVKVITKRILSYNHLAQMKYVFPEAIQIE---IHS-QDLCMTPDM 265
           L L KK  TFQNICT V+++TKR  SY HLAQ+KY+ PE +QI+   IH  + LCM PDM
Sbjct: 8   LGLRKKPTTFQNICTQVEILTKRKFSYRHLAQIKYILPEVVQIDYILIHDVKSLCMKPDM 67

Query: 264 KITLLFDAVEIHPNQSPFKALRQVFHERLLDFFKIHSE---------------------- 151
           KI+LLFD +E H  +S F ALRQVF  RLLDFF IH E                      
Sbjct: 68  KISLLFDVIEGHQEKSTFMALRQVFAYRLLDFFNIHPEVIAAALLLLVTYRWHVTIFSQD 127

Query: 150 -------------SCDIPEAMLPEPFSQRNHTALPRSM 76
                         CDIPEA+LPEPF+QR    +P+S+
Sbjct: 128 LFELNSVLFFGEQGCDIPEAILPEPFNQRTQNIIPKSL 165


>ref|XP_003620138.1| Mitochondrial protein, putative [Medicago truncatula]
           gi|355495153|gb|AES76356.1| Mitochondrial protein,
           putative [Medicago truncatula]
          Length = 622

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/133 (51%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
 Frame = -1

Query: 432 LSLHKKLPTFQNICTVVKVITKRILSYNHLAQMKYVFPEAIQIE----IHSQDLCMTPDM 265
           L L KK PTFQNIC  V+V+ KR  SY HLAQMKY+ P+ I+IE    +  + LCM PD+
Sbjct: 75  LHLRKKSPTFQNICNKVEVLAKRNFSYAHLAQMKYILPKGIEIEKVVVVDKKSLCMKPDL 134

Query: 264 KITLLFDAVEIHPNQSPFKALRQVFHERLLDFFKIHSESCDIPEAMLPEPFSQRNHTALP 85
           KITL+FD VE H  QS   AL + F+ +L++FF +H E  DIPEA LPEPFSQR +  + 
Sbjct: 135 KITLVFDVVEDHSEQSADLALIRYFNSKLINFFNLHPEVTDIPEAALPEPFSQRPYNLIF 194

Query: 84  RSMSPNLLKSYTA 46
           +  + NL K  ++
Sbjct: 195 KDGTVNLSKELSS 207


>gb|AAR87370.1| expressed protein [Oryza sativa Japonica Group]
           gi|78708839|gb|ABB47814.1| expressed protein [Oryza
           sativa Japonica Group] gi|125575225|gb|EAZ16509.1|
           hypothetical protein OsJ_31981 [Oryza sativa Japonica
           Group] gi|215768881|dbj|BAH01110.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 573

 Score =  116 bits (290), Expect = 2e-24
 Identities = 68/145 (46%), Positives = 89/145 (61%), Gaps = 5/145 (3%)
 Frame = -1

Query: 432 LSLHKKLPTFQNICTVVKVITKRILSYNHLAQMKYVFPEAIQIE---IHSQ-DLCMTPDM 265
           L L KK+ TF+NI T V+++TKR   Y HLAQMK++FPEAIQI+   +H +  LCM  DM
Sbjct: 139 LHLRKKMTTFKNIATQVEILTKREFLYTHLAQMKHLFPEAIQIKKILLHDEKSLCMYADM 198

Query: 264 KITLLFDAVE-IHPNQSPFKALRQVFHERLLDFFKIHSESCDIPEAMLPEPFSQRNHTAL 88
           +IT+L D VE   P+QS   A+ + FH +LL F   H +  DIPEAMLPEPF+ R+   L
Sbjct: 199 EITILMDTVESSSPDQSLSMAICEAFHSKLLSFLDAHHKDIDIPEAMLPEPFNSRDKLHL 258

Query: 87  PRSMSPNLLKSYTAPIECEPLLVSS 13
              +  +           EPLL SS
Sbjct: 259 KAPLDGH---------SAEPLLQSS 274


>gb|EEC67219.1| hypothetical protein OsI_34122 [Oryza sativa Indica Group]
          Length = 439

 Score =  116 bits (290), Expect = 2e-24
 Identities = 68/145 (46%), Positives = 89/145 (61%), Gaps = 5/145 (3%)
 Frame = -1

Query: 432 LSLHKKLPTFQNICTVVKVITKRILSYNHLAQMKYVFPEAIQIE---IHSQ-DLCMTPDM 265
           L L KK+ TF+NI T V+++TKR   Y HLAQMK++FPEAIQI+   +H +  LCM  DM
Sbjct: 139 LHLRKKMTTFKNIATQVEILTKREFLYTHLAQMKHLFPEAIQIKKILLHDEKSLCMYADM 198

Query: 264 KITLLFDAVE-IHPNQSPFKALRQVFHERLLDFFKIHSESCDIPEAMLPEPFSQRNHTAL 88
           +IT+L D VE   P+QS   A+ + FH +LL F   H +  DIPEAMLPEPF+ R+   L
Sbjct: 199 EITILMDTVESSSPDQSLSMAICEAFHSKLLSFLDAHHKDIDIPEAMLPEPFNSRDKLHL 258

Query: 87  PRSMSPNLLKSYTAPIECEPLLVSS 13
              +  +           EPLL SS
Sbjct: 259 KAPLDGH---------SAEPLLQSS 274


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