BLASTX nr result
ID: Coptis21_contig00023020
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023020 (726 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 338 7e-91 emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 326 3e-87 sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 321 1e-85 emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera] 314 1e-83 emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] 309 3e-82 >dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] Length = 1338 Score = 338 bits (867), Expect = 7e-91 Identities = 160/211 (75%), Positives = 181/211 (85%) Frame = -2 Query: 725 GSLMYAMVCTRPDIAFAVGVVSRFLSNPGKEHWEGVKWILRYLKGTSKACLCFGGSKTLL 546 GSLMYAMVCTRPDIA AVGVVSRFLSNPGKEHW+ VKWILRYL+GTSK CLCFG +L Sbjct: 1117 GSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFGEDNPVL 1176 Query: 545 EGYTDADMAGDVDSMKSTSGYLFTFAGGAVSWQSKLQKCVALSTTEAEYIAATECCKEML 366 GYTDADMAGDVDS KSTSGYL F+GGAVSWQSKLQKCVALSTTEAE+IAATE CKE++ Sbjct: 1177 VGYTDADMAGDVDSRKSTSGYLINFSGGAVSWQSKLQKCVALSTTEAEFIAATEACKELI 1236 Query: 365 WMKRFFNELGLKQKQFVVLCDSQSAIHLSKNPSFHSRSKHIHVRYHWIREVLDEKQLCIE 186 WMK+F ELG Q + + CDSQSAIHL+KN SFHSRSKHI VRY+WIR+VL++K L +E Sbjct: 1237 WMKKFLTELGFSQDGYQLFCDSQSAIHLAKNASFHSRSKHIDVRYNWIRDVLEKKMLRLE 1296 Query: 185 KVHTDKNGSDMMTKILPKGKFDAGCATAGLV 93 K+HTD+NGSDM+TK LPKGKF+ AG+V Sbjct: 1297 KIHTDENGSDMLTKTLPKGKFEFCREAAGIV 1327 >emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] Length = 1362 Score = 326 bits (835), Expect = 3e-87 Identities = 151/212 (71%), Positives = 179/212 (84%) Frame = -2 Query: 725 GSLMYAMVCTRPDIAFAVGVVSRFLSNPGKEHWEGVKWILRYLKGTSKACLCFGGSKTLL 546 GSLMYAMVCTRPDIA+AVGVVSRFLSNPG+ HWE VKWI+RYL+GTSK L FG K +L Sbjct: 1087 GSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPIL 1146 Query: 545 EGYTDADMAGDVDSMKSTSGYLFTFAGGAVSWQSKLQKCVALSTTEAEYIAATECCKEML 366 GYTD+DMAGDVD+ KSTSGYL TF+GGAVSWQS+LQKCVALSTTEAEYIAA E CKE+L Sbjct: 1147 VGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYIAAVEACKELL 1206 Query: 365 WMKRFFNELGLKQKQFVVLCDSQSAIHLSKNPSFHSRSKHIHVRYHWIREVLDEKQLCIE 186 WMK F ELG KQ+++VV CD+QSAIHLSKN ++H+RSKHI VRYHW+R+ L++ IE Sbjct: 1207 WMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVRYHWMRDALNDNLFEIE 1266 Query: 185 KVHTDKNGSDMMTKILPKGKFDAGCATAGLVA 90 K+HTD NGSDM+TK LP+ K C+ AG+++ Sbjct: 1267 KIHTDNNGSDMLTKTLPREKLGVCCSIAGMIS 1298 >sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Includes: RecName: Full=Protease; Includes: RecName: Full=Reverse transcriptase; Includes: RecName: Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed protein product [Nicotiana tabacum] Length = 1328 Score = 321 bits (822), Expect = 1e-85 Identities = 147/202 (72%), Positives = 178/202 (88%) Frame = -2 Query: 725 GSLMYAMVCTRPDIAFAVGVVSRFLSNPGKEHWEGVKWILRYLKGTSKACLCFGGSKTLL 546 GSLMYAMVCTRPDIA AVGVVSRFL NPGKEHWE VKWILRYL+GT+ CLCFGGS +L Sbjct: 1116 GSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPIL 1175 Query: 545 EGYTDADMAGDVDSMKSTSGYLFTFAGGAVSWQSKLQKCVALSTTEAEYIAATECCKEML 366 +GYTDADMAGD+D+ KS++GYLFTF+GGA+SWQSKLQKCVALSTTEAEYIAATE KEM+ Sbjct: 1176 KGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMI 1235 Query: 365 WMKRFFNELGLKQKQFVVLCDSQSAIHLSKNPSFHSRSKHIHVRYHWIREVLDEKQLCIE 186 W+KRF ELGL QK++VV CDSQSAI LSKN +H+R+KHI VRYHWIRE++D++ L + Sbjct: 1236 WLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVL 1295 Query: 185 KVHTDKNGSDMMTKILPKGKFD 120 K+ T++N +DM+TK++P+ KF+ Sbjct: 1296 KISTNENPADMLTKVVPRNKFE 1317 >emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera] Length = 1204 Score = 314 bits (805), Expect = 1e-83 Identities = 144/212 (67%), Positives = 174/212 (82%) Frame = -2 Query: 725 GSLMYAMVCTRPDIAFAVGVVSRFLSNPGKEHWEGVKWILRYLKGTSKACLCFGGSKTLL 546 GSLMY MVCTRPDIA+A+GVV RFLSNPG+ HWE VKWI+RYL+GTSK L FGG K +L Sbjct: 933 GSLMYVMVCTRPDIAYAIGVVIRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGGGKPIL 992 Query: 545 EGYTDADMAGDVDSMKSTSGYLFTFAGGAVSWQSKLQKCVALSTTEAEYIAATECCKEML 366 GYTD+DMAGDVD+ +ST GYL TF+GG VSWQS+ QKCVALSTTEAEYIAA E C E+L Sbjct: 993 VGYTDSDMAGDVDNRRSTLGYLMTFSGGTVSWQSRQQKCVALSTTEAEYIAAXEACNELL 1052 Query: 365 WMKRFFNELGLKQKQFVVLCDSQSAIHLSKNPSFHSRSKHIHVRYHWIREVLDEKQLCIE 186 WMK F ELG KQ+++VV CD+QSAIHLSKN ++H+RSKHI VRYHW+R+ L++ IE Sbjct: 1053 WMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVRYHWMRDALNDNLFEIE 1112 Query: 185 KVHTDKNGSDMMTKILPKGKFDAGCATAGLVA 90 K+HTD NGSDM+TK LP+ K C+ AG+++ Sbjct: 1113 KIHTDNNGSDMLTKTLPREKLGVCCSIAGMIS 1144 >emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] Length = 1317 Score = 309 bits (792), Expect = 3e-82 Identities = 143/212 (67%), Positives = 172/212 (81%) Frame = -2 Query: 725 GSLMYAMVCTRPDIAFAVGVVSRFLSNPGKEHWEGVKWILRYLKGTSKACLCFGGSKTLL 546 GSL+Y MVC RPDIA+AVGVVSRFLSNPG+ HWE VKWI+RYL+G SK L FG K +L Sbjct: 1046 GSLIYVMVCIRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGISKLKLTFGSGKPIL 1105 Query: 545 EGYTDADMAGDVDSMKSTSGYLFTFAGGAVSWQSKLQKCVALSTTEAEYIAATECCKEML 366 GYTD+DMAGDVD+ +STS YL TF+GGAVSWQS+LQKCVALSTTEAEYIAA E CKE+L Sbjct: 1106 VGYTDSDMAGDVDNRRSTSSYLMTFSGGAVSWQSRLQKCVALSTTEAEYIAAAEACKELL 1165 Query: 365 WMKRFFNELGLKQKQFVVLCDSQSAIHLSKNPSFHSRSKHIHVRYHWIREVLDEKQLCIE 186 WMK F EL KQ+++VV CD+Q+AIHLSKN +H+RSKHI VRYHW+R+ L+ IE Sbjct: 1166 WMKCFMQELXFKQQRYVVYCDNQNAIHLSKNSXYHARSKHIDVRYHWMRDALNNNLFEIE 1225 Query: 185 KVHTDKNGSDMMTKILPKGKFDAGCATAGLVA 90 K+HTD NGSDM+TK LP+ K C+ AG+++ Sbjct: 1226 KIHTDNNGSDMLTKTLPREKLGVCCSIAGMIS 1257