BLASTX nr result

ID: Coptis21_contig00023018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023018
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40096.3| unnamed protein product [Vitis vinifera]              253   1e-65
ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TA...   252   4e-65
ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase...   245   3e-63
ref|XP_003543068.1| PREDICTED: tRNA-specific adenosine deaminase...   238   4e-61
gb|ABN08468.1| CMP/dCMP deaminase, zinc-binding [Medicago trunca...   237   9e-61

>emb|CBI40096.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  253 bits (647), Expect = 1e-65
 Identities = 126/187 (67%), Positives = 145/187 (77%)
 Frame = +3

Query: 24  SDLEMASFEEEKTADTLAVMELAMQQANLALDNLEVPIGCVFVENGKVITAGRNRTSETR 203
           S ++MAS  EE    TLA MELA+QQA LALD+LEVP+GCV VE+GK+I  GRNRT+ETR
Sbjct: 12  SPVQMASLGEENLPGTLAFMELAIQQAKLALDSLEVPVGCVIVEDGKLIATGRNRTTETR 71

Query: 204 NATRHAEMEAIDDLLRNWQEIGLSATEIEGKLSRCDLYVTCEPCIMCASALSILGIRAVY 383
           NATRHAEMEAID LL  WQ+ GLS  E+    S+C LYVTCEPCIMCA++LSILGI+ VY
Sbjct: 72  NATRHAEMEAIDVLLEQWQKNGLSKLEVAEIFSKCSLYVTCEPCIMCAASLSILGIKEVY 131

Query: 384 YGCANDKFGGCGXXXXXXXXXXDKHRSNGVSQGKGFKCTGGIMASEAISLLARFFEQGNP 563
           YGCANDKFGGCG           K  ++G    KGFKCTGGIMA+EA+SLL RF+EQGNP
Sbjct: 132 YGCANDKFGGCG-SILSLHSSSSKLLTSGTPLVKGFKCTGGIMATEAVSLLQRFYEQGNP 190

Query: 564 NAPKPHR 584
           NAPKPHR
Sbjct: 191 NAPKPHR 197


>ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus
           communis] gi|223529101|gb|EEF31082.1| tRNA-specific
           adenosine deaminase subunit TAD2, putative [Ricinus
           communis]
          Length = 223

 Score =  252 bits (643), Expect = 4e-65
 Identities = 122/175 (69%), Positives = 140/175 (80%)
 Frame = +3

Query: 60  TADTLAVMELAMQQANLALDNLEVPIGCVFVENGKVITAGRNRTSETRNATRHAEMEAID 239
           +++T A MELA++QA  ALD+LEVP+GCV VE+GKVI +GRNRT+ETRNATRHAEMEAID
Sbjct: 40  SSETFAYMELALEQARHALDSLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAID 99

Query: 240 DLLRNWQEIGLSATEIEGKLSRCDLYVTCEPCIMCASALSILGIRAVYYGCANDKFGGCG 419
            LL  WQ+ GLS +E+  K S+C LYVTCEPCIMCA+ALSILGI  VYYGCANDKFGGCG
Sbjct: 100 VLLEQWQKGGLSVSEVAEKFSKCVLYVTCEPCIMCAAALSILGIEEVYYGCANDKFGGCG 159

Query: 420 XXXXXXXXXXDKHRSNGVSQGKGFKCTGGIMASEAISLLARFFEQGNPNAPKPHR 584
                         S  V+QGKGFKCTGGIMASEA+SLL  F+EQGNPNAPKPHR
Sbjct: 160 SILPLHSSSTQSLTSGVVAQGKGFKCTGGIMASEAVSLLRCFYEQGNPNAPKPHR 214


>ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Cucumis
           sativus]
          Length = 191

 Score =  245 bits (626), Expect = 3e-63
 Identities = 121/183 (66%), Positives = 139/183 (75%)
 Frame = +3

Query: 36  MASFEEEKTADTLAVMELAMQQANLALDNLEVPIGCVFVENGKVITAGRNRTSETRNATR 215
           M S  E+ ++DTL  MELA+QQA LAL+NLEVP+GCV VE+G VI  GRNRT+ETRNATR
Sbjct: 1   MDSSVEDCSSDTLRFMELAIQQAKLALNNLEVPVGCVIVEDGMVIATGRNRTTETRNATR 60

Query: 216 HAEMEAIDDLLRNWQEIGLSATEIEGKLSRCDLYVTCEPCIMCASALSILGIRAVYYGCA 395
           HAEMEAID L+  WQ  GLS +E+  K S+C LYVTCEPCIMCASALSI+GI+ VYYGCA
Sbjct: 61  HAEMEAIDILIEAWQRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSIIGIKEVYYGCA 120

Query: 396 NDKFGGCGXXXXXXXXXXDKHRSNGVSQGKGFKCTGGIMASEAISLLARFFEQGNPNAPK 575
           NDKFGGCG          +   S G   G+GFKCT GIMASEA+ L   F+EQGNPNAPK
Sbjct: 121 NDKFGGCGSILSLHLGSGEAPTS-GNGLGRGFKCTAGIMASEAVGLFRSFYEQGNPNAPK 179

Query: 576 PHR 584
           PHR
Sbjct: 180 PHR 182


>ref|XP_003543068.1| PREDICTED: tRNA-specific adenosine deaminase 2 [Glycine max]
          Length = 182

 Score =  238 bits (608), Expect = 4e-61
 Identities = 119/175 (68%), Positives = 136/175 (77%)
 Frame = +3

Query: 60  TADTLAVMELAMQQANLALDNLEVPIGCVFVENGKVITAGRNRTSETRNATRHAEMEAID 239
           +++TLA MELA+QQA LALD LEVP+GCV VE+GKVI +GRNRT+ETRNATRHAEMEAID
Sbjct: 3   SSETLAFMELAIQQAKLALDVLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAID 62

Query: 240 DLLRNWQEIGLSATEIEGKLSRCDLYVTCEPCIMCASALSILGIRAVYYGCANDKFGGCG 419
            LL  WQ+ GLS +E+  K S C LYVTCEPCIMCASALSILGI+ V+YGC+NDKFGGCG
Sbjct: 63  VLLGQWQKHGLSMSEVAEKFSNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGGCG 122

Query: 420 XXXXXXXXXXDKHRSNGVSQGKGFKCTGGIMASEAISLLARFFEQGNPNAPKPHR 584
                         +N V  GK FKCTG IMASEA+ L   F+EQGNPNAPKPHR
Sbjct: 123 -SILSLHLSNTAPLNNEVPSGKCFKCTGRIMASEAVLLFRTFYEQGNPNAPKPHR 176


>gb|ABN08468.1| CMP/dCMP deaminase, zinc-binding [Medicago truncatula]
          Length = 178

 Score =  237 bits (605), Expect = 9e-61
 Identities = 117/173 (67%), Positives = 132/173 (76%)
 Frame = +3

Query: 66  DTLAVMELAMQQANLALDNLEVPIGCVFVENGKVITAGRNRTSETRNATRHAEMEAIDDL 245
           +T   MELA+QQA LA+  LEVP+GCV VE+GKVI +GRNRT+ETRNATRHAEMEAID L
Sbjct: 5   ETHIFMELAIQQAKLAMGALEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVL 64

Query: 246 LRNWQEIGLSATEIEGKLSRCDLYVTCEPCIMCASALSILGIRAVYYGCANDKFGGCGXX 425
           L  WQ+ GLS TE+  K S C LYVTCEPCIMCASALS LGI+ V+YGC+NDKFGGCG  
Sbjct: 65  LEQWQKNGLSMTEVAKKFSNCSLYVTCEPCIMCASALSNLGIKEVFYGCSNDKFGGCG-- 122

Query: 426 XXXXXXXXDKHRSNGVSQGKGFKCTGGIMASEAISLLARFFEQGNPNAPKPHR 584
                     H S+ VS  KGFKC GGIMA EA+ LL  F+EQGNPNAPKPHR
Sbjct: 123 -----SILSLHLSDAVSPNKGFKCAGGIMAEEAVLLLRTFYEQGNPNAPKPHR 170


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