BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023017
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulg...    88   1e-17

>ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435151|ref|YP_004222369.1| hypothetical
           protein BevumaM_p136 [Beta vulgaris subsp. maritima]
           gi|346683242|ref|YP_004842174.1| hypothetical protein
           BemaM_p130 [Beta macrocarpa] gi|9049306|dbj|BAA99316.1|
           orf107b [Beta vulgaris subsp. vulgaris]
           gi|317905601|emb|CBJ14008.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439884|emb|CBJ17584.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148038|emb|CBJ20702.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500160|emb|CBX24979.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977914|emb|CBL54138.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 107

 Score = 87.8 bits (216), Expect(2) = 1e-17
 Identities = 44/68 (64%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = -2

Query: 461 PNHHTKRIDANPPRYRTCDSHRIRLAQRLLNPSRAF-FXXXXXXXXXXXXXPGAMRGMLP 285
           PNHHT RIDANPPRYRTCDSHRIRLAQRLLNPSRAF                 +  G+ P
Sbjct: 18  PNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTFPLQSSIKLAFSRRSEMGVFP 77

Query: 284 SPIICIGL 261
           SPI+CIGL
Sbjct: 78  SPIVCIGL 85



 Score = 26.6 bits (57), Expect(2) = 1e-17
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -3

Query: 259 LASSRTKEEFWRARACRNADY 197
           LASSR+K  + RARACR AD+
Sbjct: 85  LASSRSKL-YLRARACRKADH 104