BLASTX nr result

ID: Coptis21_contig00023012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023012
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518297.1| transporter, putative [Ricinus communis] gi|...   117   1e-24
ref|XP_003532584.1| PREDICTED: protein spinster homolog 1-like [...   113   2e-23
ref|XP_003528407.1| PREDICTED: protein spinster homolog 1-like [...   113   2e-23
ref|XP_003612923.1| Spinster-like protein [Medicago truncatula] ...   111   5e-23
ref|NP_001168011.1| uncharacterized protein LOC100381734 [Zea ma...   111   7e-23

>ref|XP_002518297.1| transporter, putative [Ricinus communis]
           gi|223542517|gb|EEF44057.1| transporter, putative
           [Ricinus communis]
          Length = 541

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/85 (62%), Positives = 66/85 (77%)
 Frame = +3

Query: 3   KRLLFIFCVINLLNYVDRGVMSSNGVNGRQRTCTNGVCTAGTGIQGDFDLTNFEDGILST 182
           +RLL IFC+INL+NYVDRG ++SNGVNG +RTCT+G CT+G+GIQGDF+L NFEDG+LS+
Sbjct: 45  RRLLVIFCIINLINYVDRGAIASNGVNGNRRTCTSGTCTSGSGIQGDFNLNNFEDGVLSS 104

Query: 183 AFVGGXXXXXXXXXXXXKRFNPFRL 257
           AF+ G            K FNPFRL
Sbjct: 105 AFMVGLLVASPIFASLAKSFNPFRL 129


>ref|XP_003532584.1| PREDICTED: protein spinster homolog 1-like [Glycine max]
          Length = 537

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/85 (63%), Positives = 62/85 (72%)
 Frame = +3

Query: 3   KRLLFIFCVINLLNYVDRGVMSSNGVNGRQRTCTNGVCTAGTGIQGDFDLTNFEDGILST 182
           KRLL IFCVINLLNY+DRG ++SNGVNG QRTC  G C +GTGIQGDF+L NFEDG+LS+
Sbjct: 42  KRLLAIFCVINLLNYLDRGAIASNGVNGSQRTCEGGTCKSGTGIQGDFNLNNFEDGVLSS 101

Query: 183 AFVGGXXXXXXXXXXXXKRFNPFRL 257
           AF+ G            K  NPFRL
Sbjct: 102 AFMVGLLVASPIFASLAKSVNPFRL 126


>ref|XP_003528407.1| PREDICTED: protein spinster homolog 1-like [Glycine max]
          Length = 530

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/85 (63%), Positives = 62/85 (72%)
 Frame = +3

Query: 3   KRLLFIFCVINLLNYVDRGVMSSNGVNGRQRTCTNGVCTAGTGIQGDFDLTNFEDGILST 182
           KRLL IFCVINLLNY+DRG ++SNGVNG QRTC  G C +GTGIQGDF+L NFEDG+LS+
Sbjct: 35  KRLLAIFCVINLLNYLDRGAIASNGVNGSQRTCEGGTCKSGTGIQGDFNLNNFEDGVLSS 94

Query: 183 AFVGGXXXXXXXXXXXXKRFNPFRL 257
           AF+ G            K  NPFRL
Sbjct: 95  AFMVGLLVASPIFASLAKSVNPFRL 119


>ref|XP_003612923.1| Spinster-like protein [Medicago truncatula]
           gi|355514258|gb|AES95881.1| Spinster-like protein
           [Medicago truncatula]
          Length = 497

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
 Frame = +3

Query: 3   KRLLFIFCVINLLNYVDRGVMSSNGVNGRQRTCT-NGVCTAGTGIQGDFDLTNFEDGILS 179
           KRLL IFC+INL+NYVDRG ++SNGVNG   TCT +GVCTAGTGIQGDF+L+NF+DG+LS
Sbjct: 17  KRLLIIFCIINLINYVDRGAIASNGVNGTLETCTESGVCTAGTGIQGDFNLSNFQDGVLS 76

Query: 180 TAFVGGXXXXXXXXXXXXKRFNPFRL 257
           +AF+ G            K  NPFRL
Sbjct: 77  SAFMVGLLIASPIFASLAKSHNPFRL 102


>ref|NP_001168011.1| uncharacterized protein LOC100381734 [Zea mays]
           gi|223945489|gb|ACN26828.1| unknown [Zea mays]
           gi|413918974|gb|AFW58906.1| hypothetical protein
           ZEAMMB73_132955 [Zea mays]
          Length = 523

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/85 (57%), Positives = 64/85 (75%)
 Frame = +3

Query: 3   KRLLFIFCVINLLNYVDRGVMSSNGVNGRQRTCTNGVCTAGTGIQGDFDLTNFEDGILST 182
           KRLL +FC+IN+LNY+DRG ++SNGVNG +++C+ G CT+G+GIQGDFDL N EDG LS+
Sbjct: 34  KRLLVMFCIINMLNYIDRGAIASNGVNGTRKSCSGGTCTSGSGIQGDFDLNNLEDGTLSS 93

Query: 183 AFVGGXXXXXXXXXXXXKRFNPFRL 257
           AF+ G            KR+NPFRL
Sbjct: 94  AFMVGLLVSSLIFACLVKRYNPFRL 118


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